Literature DB >> 21588232

Methyl 4-isonicotinamido-benzoate monohydrate.

Yang Zhang1, Xiao-Li Zhao.   

Abstract

The title compound, C(14)H(12)N(2)O(3)·H(2)O, synthesized by the reaction of methyl 4-amino-benzoate with isonicotinoyl chloride hydro-chloride, is relatively planar, with the pyridine ring being inclined by 7.46 (7)° to the benzene ring. In the crystal, the methyl 4-isonicotinamido-benzoate mol-ecules are inter-linked by water mol-ecules via N-H⋯O, O-H⋯N and O-H⋯O hydrogen bonds, leading to the formation of a double-chain ribbon-like structure.

Entities:  

Year:  2010        PMID: 21588232      PMCID: PMC3007520          DOI: 10.1107/S1600536810024979

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of methyl 4-amino­benzoate and isonicotinoyl chloride hydro­chloride, see: Margiotta et al. (2008 ▶). For the use of such ligands in coordination chemistry, see: Saeed et al. (2010 ▶); Kitagawa (2005 ▶). For standard bond distances, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C14H12N2O3·H2O M = 274.27 Triclinic, a = 6.8836 (3) Å b = 8.8810 (4) Å c = 10.9658 (5) Å α = 96.062 (1)° β = 90.896 (1)° γ = 95.854 (1)° V = 662.91 (5) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.48 × 0.37 × 0.27 mm

Data collection

Bruker SMART 1K CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.952, T max = 0.973 7689 measured reflections 2318 independent reflections 1968 reflections with I > 2σ(I) R int = 0.015

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.102 S = 1.06 2318 reflections 181 parameters 3 restraints H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.16 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and local programs. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810024979/su2171sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810024979/su2171Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12N2O3·H2OZ = 2
Mr = 274.27F(000) = 288
Triclinic, P1Dx = 1.374 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.8836 (3) ÅCell parameters from 4652 reflections
b = 8.8810 (4) Åθ = 2.3–28.3°
c = 10.9658 (5) ŵ = 0.10 mm1
α = 96.062 (1)°T = 296 K
β = 90.896 (1)°Block, colourless
γ = 95.854 (1)°0.48 × 0.37 × 0.27 mm
V = 662.91 (5) Å3
Bruker SMART 1K CCD area-detector diffractometer2318 independent reflections
Radiation source: fine-focus sealed tube1968 reflections with I > 2σ(I)
graphiteRint = 0.015
Detector resolution: 8.192 pixels mm-1θmax = 25.0°, θmin = 1.9°
thin–slice ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −10→10
Tmin = 0.952, Tmax = 0.973l = −13→12
7689 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.102H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0526P)2 + 0.1234P] where P = (Fo2 + 2Fc2)/3
2318 reflections(Δ/σ)max < 0.001
181 parametersΔρmax = 0.14 e Å3
3 restraintsΔρmin = −0.16 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.02099 (15)0.81758 (12)0.39503 (10)0.0431 (3)
H1A−0.09560.78300.36980.052*
N2−0.34705 (19)0.52096 (14)0.70330 (12)0.0576 (3)
O30.61235 (16)1.21607 (13)0.08752 (10)0.0623 (3)
O20.33143 (18)1.24867 (15)−0.00513 (11)0.0772 (4)
O10.23987 (15)0.81573 (15)0.55168 (10)0.0713 (4)
O1W0.30526 (15)1.33795 (13)−0.24537 (9)0.0662 (3)
H1WA0.42231.3964−0.25160.099*
H1WB0.31421.3192−0.16770.099*
C10.7154 (3)1.3157 (2)0.00895 (17)0.0722 (5)
H1B0.85271.32510.02900.108*
H1C0.66851.41420.02070.108*
H1D0.69371.2740−0.07510.108*
C20.4195 (2)1.19167 (16)0.07065 (12)0.0507 (4)
C30.3244 (2)1.08944 (15)0.15573 (11)0.0440 (3)
C40.1229 (2)1.05719 (15)0.14751 (12)0.0480 (3)
H4A0.05211.09740.08810.058*
C50.0271 (2)0.96663 (15)0.22619 (12)0.0462 (3)
H5A−0.10790.94520.21920.055*
C60.13107 (19)0.90658 (14)0.31652 (11)0.0397 (3)
C70.3329 (2)0.93699 (16)0.32434 (12)0.0467 (3)
H7A0.40410.89630.38330.056*
C80.4280 (2)1.02781 (16)0.24441 (13)0.0479 (3)
H8A0.56331.04790.25010.057*
C90.07765 (19)0.78029 (15)0.50566 (12)0.0442 (3)
C10−0.07614 (19)0.69056 (14)0.57202 (11)0.0408 (3)
C11−0.2737 (2)0.69375 (16)0.55336 (12)0.0483 (3)
H11A−0.32010.75220.49590.058*
C12−0.4020 (2)0.60887 (18)0.62121 (14)0.0573 (4)
H12A−0.53510.61360.60860.069*
C13−0.1559 (2)0.51992 (17)0.72155 (14)0.0566 (4)
H13A−0.11370.45970.77900.068*
C14−0.0171 (2)0.60287 (16)0.66023 (13)0.0515 (4)
H14A0.11510.60020.67780.062*
U11U22U33U12U13U23
N10.0379 (6)0.0495 (6)0.0418 (6)−0.0031 (5)−0.0043 (4)0.0129 (5)
N20.0608 (8)0.0573 (7)0.0527 (7)−0.0070 (6)0.0120 (6)0.0074 (6)
O30.0606 (7)0.0702 (7)0.0580 (6)−0.0041 (5)0.0084 (5)0.0254 (5)
O20.0824 (9)0.0973 (9)0.0553 (7)−0.0071 (7)−0.0077 (6)0.0408 (6)
O10.0464 (6)0.1138 (10)0.0532 (6)−0.0184 (6)−0.0125 (5)0.0349 (6)
O1W0.0574 (6)0.0887 (8)0.0504 (6)−0.0217 (6)−0.0132 (5)0.0287 (5)
C10.0783 (12)0.0701 (11)0.0688 (11)−0.0096 (9)0.0164 (9)0.0245 (8)
C20.0648 (9)0.0515 (8)0.0351 (7)−0.0004 (7)0.0007 (6)0.0076 (6)
C30.0542 (8)0.0438 (7)0.0331 (6)0.0004 (6)0.0002 (6)0.0052 (5)
C40.0552 (8)0.0509 (8)0.0383 (7)0.0027 (6)−0.0103 (6)0.0115 (6)
C50.0428 (7)0.0516 (8)0.0441 (7)0.0010 (6)−0.0069 (6)0.0097 (6)
C60.0432 (7)0.0388 (6)0.0369 (6)0.0018 (5)−0.0015 (5)0.0053 (5)
C70.0429 (7)0.0545 (8)0.0457 (7)0.0061 (6)−0.0028 (6)0.0183 (6)
C80.0420 (7)0.0565 (8)0.0461 (7)0.0018 (6)0.0008 (6)0.0134 (6)
C90.0410 (7)0.0512 (7)0.0401 (7)0.0001 (6)−0.0036 (5)0.0090 (6)
C100.0428 (7)0.0423 (7)0.0365 (6)0.0013 (5)0.0017 (5)0.0034 (5)
C110.0458 (8)0.0580 (8)0.0414 (7)0.0048 (6)−0.0005 (6)0.0076 (6)
C120.0429 (8)0.0741 (10)0.0522 (8)−0.0028 (7)0.0048 (6)0.0027 (7)
C130.0642 (10)0.0536 (8)0.0553 (9)0.0076 (7)0.0097 (7)0.0193 (7)
C140.0473 (8)0.0592 (8)0.0513 (8)0.0093 (6)0.0046 (6)0.0180 (7)
N1—C91.3528 (17)C4—C51.3721 (19)
N1—C61.4078 (16)C4—H4A0.9300
N1—H1A0.8600C5—C61.3946 (17)
N2—C121.327 (2)C5—H5A0.9300
N2—C131.329 (2)C6—C71.3879 (18)
O3—C21.3296 (18)C7—C81.3807 (19)
O3—C11.4422 (17)C7—H7A0.9300
O2—C21.2043 (18)C8—H8A0.9300
O1—C91.2156 (16)C9—C101.5032 (18)
O1W—H1WA0.9207C10—C111.3758 (19)
O1W—H1WB0.8877C10—C141.3853 (19)
C1—H1B0.9600C11—C121.380 (2)
C1—H1C0.9600C11—H11A0.9300
C1—H1D0.9600C12—H12A0.9300
C2—O21.2043 (18)C13—C141.375 (2)
C2—C31.4833 (19)C13—H13A0.9300
C3—C41.387 (2)C14—H14A0.9300
C3—C81.3871 (19)
C9—N1—C6127.41 (11)C7—C6—C5119.24 (12)
C9—N1—H1A116.3C7—C6—N1124.08 (11)
C6—N1—H1A116.3C5—C6—N1116.69 (11)
C12—N2—C13116.54 (12)C8—C7—C6119.91 (12)
C2—O3—C1116.54 (13)C8—C7—H7A120.0
O2—O2—C20(10)C6—C7—H7A120.0
H1WA—O1W—H1WB100.2C7—C8—C3120.88 (13)
O3—C1—H1B109.5C7—C8—H8A119.6
O3—C1—H1C109.5C3—C8—H8A119.6
H1B—C1—H1C109.5O1—C9—N1124.09 (12)
O3—C1—H1D109.5O1—C9—C10120.49 (12)
H1B—C1—H1D109.5N1—C9—C10115.42 (11)
H1C—C1—H1D109.5C11—C10—C14117.50 (12)
O2—C2—O20.00 (10)C11—C10—C9123.90 (12)
O2—C2—O3123.17 (13)C14—C10—C9118.56 (12)
O2—C2—O3123.17 (13)C10—C11—C12118.98 (13)
O2—C2—C3123.63 (14)C10—C11—H11A120.5
O2—C2—C3123.63 (14)C12—C11—H11A120.5
O3—C2—C3113.20 (12)N2—C12—C11123.99 (14)
C4—C3—C8118.92 (12)N2—C12—H12A118.0
C4—C3—C2118.31 (12)C11—C12—H12A118.0
C8—C3—C2122.76 (13)N2—C13—C14123.67 (14)
C5—C4—C3120.67 (12)N2—C13—H13A118.2
C5—C4—H4A119.7C14—C13—H13A118.2
C3—C4—H4A119.7C13—C14—C10119.26 (13)
C4—C5—C6120.37 (12)C13—C14—H14A120.4
C4—C5—H5A119.8C10—C14—H14A120.4
C6—C5—H5A119.8
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1Wi0.862.102.9014 (14)155
O1W—H1WA···N2ii0.921.942.8510 (16)169
O1W—H1WB···O20.891.962.8385 (14)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1Wi0.862.102.9014 (14)155
O1W—H1WA⋯N2ii0.921.942.8510 (16)169
O1W—H1WB⋯O20.891.962.8385 (14)172

Symmetry codes: (i) ; (ii) .

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