Literature DB >> 23125723

1-(2-Carb-oxy-eth-yl)-5-ethyl-2-methyl-pyridinium chloride.

V Sabari1, G Kalaiselvi, S Balasubramanian, S Aravindhan.   

Abstract

In the crystal structure of the title salt, C(11)H(16)NO(2) (+)·Cl(-), the cations and anions are linked by O-H⋯Cl hydrogen bonds. The structure is further stabilized by weak C-H⋯Cl hydrogen bonds.

Entities:  

Year:  2012        PMID: 23125723      PMCID: PMC3470310          DOI: 10.1107/S1600536812038809

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of 4-amino­pyridine, see: Judge & Bever (2006 ▶); Schwid et al. (1997 ▶); Strupp et al. (2004 ▶). For related structures, see: Anderson et al. (2005 ▶); Fun et al. (2009 ▶).

Experimental

Crystal data

C11H16NO2 +·Cl− M = 229.70 Triclinic, a = 7.5013 (4) Å b = 9.0509 (5) Å c = 9.3452 (5) Å α = 75.253 (2)° β = 80.985 (2)° γ = 72.047 (2)° V = 581.59 (5) Å3 Z = 2 Mo Kα radiation μ = 0.31 mm−1 T = 293 K 0.32 × 0.20 × 0.10 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.972, T max = 0.992 11668 measured reflections 2772 independent reflections 2363 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.102 S = 0.83 2772 reflections 142 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.23 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812038809/bt6827sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812038809/bt6827Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812038809/bt6827Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H16NO2+·ClZ = 2
Mr = 229.70F(000) = 244
Triclinic, P1Dx = 1.312 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.5013 (4) ÅCell parameters from 5710 reflections
b = 9.0509 (5) Åθ = 1.8–28.5°
c = 9.3452 (5) ŵ = 0.31 mm1
α = 75.253 (2)°T = 293 K
β = 80.985 (2)°Triclinic, colourless
γ = 72.047 (2)°0.32 × 0.20 × 0.10 mm
V = 581.59 (5) Å3
Bruker APEXII CCD area-detector diffractometer2772 independent reflections
Radiation source: fine-focus sealed tube2363 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
ω and φ scansθmax = 27.9°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −9→9
Tmin = 0.972, Tmax = 0.992k = −11→11
11668 measured reflectionsl = −10→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.102w = 1/[σ2(Fo2) + (0.0665P)2 + 0.2215P] where P = (Fo2 + 2Fc2)/3
S = 0.83(Δ/σ)max < 0.001
2772 reflectionsΔρmax = 0.23 e Å3
142 parametersΔρmin = −0.19 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.034 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O21.11724 (18)0.12433 (14)0.49990 (13)0.0607 (3)
Cl11.13273 (5)0.19233 (4)0.17024 (4)0.04786 (14)
N10.73265 (15)0.39471 (13)0.81065 (11)0.0344 (2)
C10.60912 (19)0.31985 (15)0.89780 (13)0.0373 (3)
C81.01152 (18)0.23770 (16)0.56489 (14)0.0388 (3)
C50.67204 (19)0.53934 (15)0.72045 (13)0.0374 (3)
H50.76070.58770.66390.045*
O10.92281 (18)0.36464 (13)0.49974 (11)0.0570 (3)
C40.4848 (2)0.61779 (16)0.70897 (14)0.0390 (3)
C110.6787 (2)0.16261 (18)1.00116 (16)0.0503 (4)
H11A0.72710.08100.94530.075*
H11B0.57700.13961.07070.075*
H11C0.77680.16621.05390.075*
C30.3566 (2)0.54196 (18)0.79512 (16)0.0441 (3)
H30.22820.59000.78970.053*
C20.4195 (2)0.39556 (17)0.88856 (15)0.0430 (3)
H20.33230.34650.94680.052*
C60.93976 (19)0.32296 (19)0.81201 (15)0.0436 (3)
H6A0.97090.28340.91430.052*
H6B1.00140.40550.76710.052*
C71.0172 (2)0.18822 (18)0.73100 (15)0.0448 (3)
H7B1.14660.13560.75340.054*
H7A0.94630.11100.76920.054*
C90.4262 (2)0.77820 (17)0.60617 (17)0.0510 (4)
H9B0.48990.84770.62730.061*
H9A0.29200.82420.62460.061*
C100.4713 (3)0.7697 (2)0.44375 (17)0.0566 (4)
H10A0.43270.87490.38250.085*
H10C0.40540.70380.42140.085*
H10B0.60420.72520.42470.085*
H2A1.108 (3)0.153 (3)0.399 (3)0.099 (8)*
U11U22U33U12U13U23
O20.0687 (7)0.0570 (7)0.0404 (6)0.0055 (6)−0.0043 (5)−0.0115 (5)
Cl10.0537 (2)0.0563 (2)0.03510 (19)−0.01908 (17)0.00042 (14)−0.01085 (14)
N10.0393 (5)0.0394 (6)0.0274 (5)−0.0143 (4)−0.0016 (4)−0.0091 (4)
C10.0487 (7)0.0390 (7)0.0276 (5)−0.0171 (6)0.0032 (5)−0.0114 (5)
C80.0357 (6)0.0436 (7)0.0364 (6)−0.0143 (5)−0.0016 (5)−0.0048 (5)
C50.0470 (7)0.0387 (7)0.0306 (6)−0.0185 (5)−0.0004 (5)−0.0088 (5)
O10.0768 (8)0.0457 (6)0.0376 (5)−0.0042 (5)−0.0076 (5)−0.0044 (4)
C40.0499 (7)0.0368 (6)0.0329 (6)−0.0116 (5)−0.0040 (5)−0.0124 (5)
C110.0660 (9)0.0424 (8)0.0364 (7)−0.0154 (7)0.0070 (6)−0.0044 (6)
C30.0407 (7)0.0496 (8)0.0443 (7)−0.0111 (6)−0.0002 (6)−0.0185 (6)
C20.0454 (7)0.0486 (8)0.0395 (7)−0.0211 (6)0.0081 (6)−0.0148 (6)
C60.0391 (7)0.0578 (8)0.0350 (6)−0.0148 (6)−0.0088 (5)−0.0070 (6)
C70.0382 (7)0.0514 (8)0.0350 (6)−0.0061 (6)−0.0022 (5)−0.0010 (6)
C90.0661 (10)0.0376 (7)0.0460 (8)−0.0078 (7)−0.0099 (7)−0.0087 (6)
C100.0693 (10)0.0565 (9)0.0428 (8)−0.0199 (8)−0.0084 (7)−0.0039 (7)
O2—C81.3097 (18)C11—H11C0.9600
O2—H2A0.92 (3)C3—C21.377 (2)
N1—C51.3499 (17)C3—H30.9300
N1—C11.3604 (16)C2—H20.9300
N1—C61.4885 (17)C6—C71.514 (2)
C1—C21.381 (2)C6—H6A0.9700
C1—C111.4938 (19)C6—H6B0.9700
C8—O11.1971 (17)C7—H7B0.9700
C8—C71.5058 (19)C7—H7A0.9700
C5—C41.372 (2)C9—C101.519 (2)
C5—H50.9300C9—H9B0.9700
C4—C31.388 (2)C9—H9A0.9700
C4—C91.5009 (19)C10—H10A0.9600
C11—H11A0.9600C10—H10C0.9600
C11—H11B0.9600C10—H10B0.9600
C8—O2—H2A110.8 (16)C3—C2—H2119.3
C5—N1—C1121.15 (11)C1—C2—H2119.3
C5—N1—C6116.99 (11)N1—C6—C7114.17 (11)
C1—N1—C6121.85 (11)N1—C6—H6A108.7
N1—C1—C2117.68 (12)C7—C6—H6A108.7
N1—C1—C11120.43 (13)N1—C6—H6B108.7
C2—C1—C11121.88 (12)C7—C6—H6B108.7
O1—C8—O2123.99 (13)H6A—C6—H6B107.6
O1—C8—C7124.60 (13)C8—C7—C6114.89 (12)
O2—C8—C7111.41 (12)C8—C7—H7B108.5
N1—C5—C4122.58 (12)C6—C7—H7B108.5
N1—C5—H5118.7C8—C7—H7A108.5
C4—C5—H5118.7C6—C7—H7A108.5
C5—C4—C3117.08 (13)H7B—C7—H7A107.5
C5—C4—C9120.07 (13)C4—C9—C10112.48 (12)
C3—C4—C9122.85 (14)C4—C9—H9B109.1
C1—C11—H11A109.5C10—C9—H9B109.1
C1—C11—H11B109.5C4—C9—H9A109.1
H11A—C11—H11B109.5C10—C9—H9A109.1
C1—C11—H11C109.5H9B—C9—H9A107.8
H11A—C11—H11C109.5C9—C10—H10A109.5
H11B—C11—H11C109.5C9—C10—H10C109.5
C2—C3—C4119.99 (13)H10A—C10—H10C109.5
C2—C3—H3120.0C9—C10—H10B109.5
C4—C3—H3120.0H10A—C10—H10B109.5
C3—C2—C1121.50 (12)H10C—C10—H10B109.5
C5—N1—C1—C21.26 (17)C4—C3—C2—C1−0.9 (2)
C6—N1—C1—C2−179.81 (11)N1—C1—C2—C3−0.25 (19)
C5—N1—C1—C11−177.69 (11)C11—C1—C2—C3178.69 (13)
C6—N1—C1—C111.24 (18)C5—N1—C6—C7−105.73 (14)
C1—N1—C5—C4−1.18 (18)C1—N1—C6—C775.30 (15)
C6—N1—C5—C4179.84 (11)O1—C8—C7—C6−14.0 (2)
N1—C5—C4—C30.01 (19)O2—C8—C7—C6165.58 (13)
N1—C5—C4—C9−179.76 (11)N1—C6—C7—C869.15 (16)
C5—C4—C3—C20.99 (19)C5—C4—C9—C1068.80 (18)
C9—C4—C3—C2−179.24 (13)C3—C4—C9—C10−110.95 (16)
D—H···AD—HH···AD···AD—H···A
C2—H2···Cl1i0.932.723.6249 (14)166
C6—H6A···Cl1ii0.972.683.6261 (14)166
O2—H2A···Cl10.92 (3)2.06 (3)2.9749 (12)170 (2)
C11—H11A···Cl1iii0.962.793.7410 (16)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2A⋯Cl10.92 (3)2.06 (3)2.9749 (12)170 (2)
C2—H2⋯Cl1i 0.932.723.6249 (14)166
C6—H6A⋯Cl1ii 0.972.683.6261 (14)166
C11—H11A⋯Cl1iii 0.962.793.7410 (16)170

Symmetry codes: (i) ; (ii) ; (iii) .

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