| Literature DB >> 23125721 |
Fahimeh Sabbaghi1, Mehrdad Pourayoubi, Marek Nečas, Peter Bartoš.
Abstract
The N-H bond in the title compound, C(13)H(14)NO(3)P, is syn-oriented relative to the P=O bond. The N atom deviates somewhat from planarity, the sum of the bond angles being 353.3°. The P atom has a distorted tetra-hedral coordination; its bond angles are in the range 93.96 (5)-116.83 (6)°. In the crystal, mol-ecules form centrosymmetric dimers through P=O⋯H-N hydrogen bonds.Entities:
Year: 2012 PMID: 23125721 PMCID: PMC3470308 DOI: 10.1107/S160053681203869X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H14NO3P | |
| Monoclinic, | Mo |
| Cell parameters from 7682 reflections | |
| θ = 2.8–27.1° | |
| µ = 0.22 mm−1 | |
| β = 114.217 (6)° | |
| Block, white | |
| 0.50 × 0.50 × 0.40 mm |
| Oxford Diffraction Xcalibur (Sapphire2) diffractometer | 2212 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 1871 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.4353 pixels mm-1 | θmax = 25.0°, θmin = 2.8° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 14649 measured reflections |
| Refinement on | Primary atom site location: heavy-atom method |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2212 reflections | (Δ/σ)max = 0.001 |
| 168 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P1 | 0.51390 (4) | 0.43348 (3) | 0.30989 (4) | 0.01769 (14) | |
| O1 | 0.38345 (11) | 0.43725 (7) | 0.34520 (10) | 0.0208 (3) | |
| O2 | 0.50768 (12) | 0.50885 (7) | 0.18982 (10) | 0.0223 (3) | |
| O3 | 0.52841 (11) | 0.34002 (7) | 0.22495 (10) | 0.0211 (3) | |
| N1 | 0.67107 (14) | 0.44375 (9) | 0.44729 (14) | 0.0207 (3) | |
| H1N | 0.662 (2) | 0.4674 (13) | 0.513 (2) | 0.032 (5)* | |
| C1 | 0.81454 (17) | 0.45739 (12) | 0.43646 (17) | 0.0273 (4) | |
| H1A | 0.8961 | 0.4325 | 0.5225 | 0.041* | |
| H1B | 0.8303 | 0.5273 | 0.4256 | 0.041* | |
| H1C | 0.8133 | 0.4214 | 0.3540 | 0.041* | |
| C2 | 0.47748 (15) | 0.60922 (11) | 0.19327 (15) | 0.0188 (3) | |
| C3 | 0.51171 (16) | 0.66074 (11) | 0.31815 (15) | 0.0226 (3) | |
| H3 | 0.5552 | 0.6285 | 0.4072 | 0.027* | |
| C4 | 0.48104 (17) | 0.76048 (12) | 0.31004 (17) | 0.0257 (4) | |
| H4 | 0.5030 | 0.7967 | 0.3946 | 0.031* | |
| C5 | 0.41887 (17) | 0.80803 (12) | 0.18051 (17) | 0.0267 (4) | |
| H5 | 0.3990 | 0.8764 | 0.1762 | 0.032* | |
| C6 | 0.38592 (17) | 0.75473 (12) | 0.05730 (17) | 0.0269 (4) | |
| H6 | 0.3434 | 0.7869 | −0.0318 | 0.032* | |
| C7 | 0.41444 (16) | 0.65494 (11) | 0.06295 (15) | 0.0228 (3) | |
| H7 | 0.3910 | 0.6185 | −0.0217 | 0.027* | |
| C8 | 0.54261 (16) | 0.24509 (11) | 0.28322 (14) | 0.0195 (3) | |
| C9 | 0.68401 (17) | 0.20402 (12) | 0.34803 (16) | 0.0249 (4) | |
| H9 | 0.7707 | 0.2406 | 0.3583 | 0.030* | |
| C10 | 0.69714 (18) | 0.10862 (12) | 0.39770 (16) | 0.0272 (4) | |
| H10 | 0.7936 | 0.0795 | 0.4431 | 0.033* | |
| C11 | 0.57023 (18) | 0.05567 (12) | 0.38137 (16) | 0.0264 (4) | |
| H11 | 0.5797 | −0.0099 | 0.4149 | 0.032* | |
| C12 | 0.42946 (17) | 0.09791 (12) | 0.31628 (16) | 0.0276 (4) | |
| H12 | 0.3427 | 0.0613 | 0.3056 | 0.033* | |
| C13 | 0.41468 (17) | 0.19365 (12) | 0.26646 (16) | 0.0248 (4) | |
| H13 | 0.3184 | 0.2231 | 0.2217 | 0.030* |
| P1 | 0.0214 (2) | 0.0152 (2) | 0.0177 (2) | 0.00056 (15) | 0.00922 (16) | −0.00031 (15) |
| O1 | 0.0221 (5) | 0.0185 (6) | 0.0227 (5) | −0.0005 (4) | 0.0100 (4) | −0.0020 (4) |
| O2 | 0.0332 (6) | 0.0155 (6) | 0.0210 (5) | 0.0015 (4) | 0.0141 (5) | 0.0010 (4) |
| O3 | 0.0301 (6) | 0.0149 (6) | 0.0202 (5) | 0.0020 (4) | 0.0122 (4) | −0.0002 (4) |
| N1 | 0.0217 (7) | 0.0224 (8) | 0.0202 (7) | 0.0009 (5) | 0.0109 (6) | −0.0024 (6) |
| C1 | 0.0225 (8) | 0.0297 (10) | 0.0317 (9) | −0.0026 (7) | 0.0130 (7) | −0.0037 (7) |
| C2 | 0.0188 (7) | 0.0150 (8) | 0.0248 (8) | −0.0001 (6) | 0.0112 (6) | 0.0010 (6) |
| C3 | 0.0255 (8) | 0.0215 (9) | 0.0203 (8) | −0.0002 (6) | 0.0089 (6) | 0.0012 (6) |
| C4 | 0.0296 (8) | 0.0205 (9) | 0.0288 (8) | −0.0019 (7) | 0.0138 (7) | −0.0039 (7) |
| C5 | 0.0276 (8) | 0.0169 (9) | 0.0375 (9) | 0.0032 (6) | 0.0155 (7) | 0.0031 (7) |
| C6 | 0.0260 (8) | 0.0256 (9) | 0.0275 (8) | 0.0041 (7) | 0.0095 (7) | 0.0088 (7) |
| C7 | 0.0238 (8) | 0.0244 (9) | 0.0202 (8) | 0.0000 (6) | 0.0089 (6) | 0.0004 (6) |
| C8 | 0.0278 (8) | 0.0143 (8) | 0.0184 (7) | 0.0001 (6) | 0.0116 (6) | −0.0021 (6) |
| C9 | 0.0241 (8) | 0.0215 (9) | 0.0306 (8) | −0.0022 (6) | 0.0127 (7) | 0.0000 (7) |
| C10 | 0.0273 (9) | 0.0221 (9) | 0.0318 (9) | 0.0053 (7) | 0.0117 (7) | 0.0036 (7) |
| C11 | 0.0380 (9) | 0.0184 (9) | 0.0254 (8) | −0.0003 (7) | 0.0156 (7) | 0.0006 (7) |
| C12 | 0.0293 (9) | 0.0259 (10) | 0.0294 (9) | −0.0079 (7) | 0.0138 (7) | −0.0029 (7) |
| C13 | 0.0220 (8) | 0.0253 (10) | 0.0255 (8) | 0.0002 (7) | 0.0083 (6) | −0.0019 (7) |
| P1—O1 | 1.4632 (10) | C5—C6 | 1.387 (2) |
| P1—O3 | 1.5875 (10) | C5—H5 | 0.9500 |
| P1—O2 | 1.5949 (10) | C6—C7 | 1.385 (2) |
| P1—N1 | 1.6148 (13) | C6—H6 | 0.9500 |
| O2—C2 | 1.4037 (18) | C7—H7 | 0.9500 |
| O3—C8 | 1.4108 (17) | C8—C13 | 1.380 (2) |
| N1—C1 | 1.4625 (18) | C8—C9 | 1.382 (2) |
| N1—H1N | 0.788 (18) | C9—C10 | 1.385 (2) |
| C1—H1A | 0.9800 | C9—H9 | 0.9500 |
| C1—H1B | 0.9800 | C10—C11 | 1.383 (2) |
| C1—H1C | 0.9800 | C10—H10 | 0.9500 |
| C2—C7 | 1.381 (2) | C11—C12 | 1.384 (2) |
| C2—C3 | 1.387 (2) | C11—H11 | 0.9500 |
| C3—C4 | 1.388 (2) | C12—C13 | 1.389 (2) |
| C3—H3 | 0.9500 | C12—H12 | 0.9500 |
| C4—C5 | 1.386 (2) | C13—H13 | 0.9500 |
| C4—H4 | 0.9500 | ||
| O1—P1—O3 | 116.83 (6) | C4—C5—H5 | 120.4 |
| O1—P1—O2 | 114.42 (6) | C6—C5—H5 | 120.4 |
| O3—P1—O2 | 93.96 (5) | C7—C6—C5 | 120.62 (14) |
| O1—P1—N1 | 112.78 (6) | C7—C6—H6 | 119.7 |
| O3—P1—N1 | 106.80 (6) | C5—C6—H6 | 119.7 |
| O2—P1—N1 | 110.45 (6) | C2—C7—C6 | 119.08 (14) |
| C2—O2—P1 | 123.35 (9) | C2—C7—H7 | 120.5 |
| C8—O3—P1 | 121.01 (9) | C6—C7—H7 | 120.5 |
| C1—N1—P1 | 122.53 (10) | C13—C8—C9 | 121.84 (14) |
| C1—N1—H1N | 117.4 (13) | C13—C8—O3 | 119.17 (13) |
| P1—N1—H1N | 113.4 (14) | C9—C8—O3 | 118.87 (13) |
| N1—C1—H1A | 109.5 | C8—C9—C10 | 118.86 (14) |
| N1—C1—H1B | 109.5 | C8—C9—H9 | 120.6 |
| H1A—C1—H1B | 109.5 | C10—C9—H9 | 120.6 |
| N1—C1—H1C | 109.5 | C11—C10—C9 | 120.19 (15) |
| H1A—C1—H1C | 109.5 | C11—C10—H10 | 119.9 |
| H1B—C1—H1C | 109.5 | C9—C10—H10 | 119.9 |
| C7—C2—C3 | 121.52 (14) | C10—C11—C12 | 120.21 (15) |
| C7—C2—O2 | 115.43 (13) | C10—C11—H11 | 119.9 |
| C3—C2—O2 | 123.03 (13) | C12—C11—H11 | 119.9 |
| C2—C3—C4 | 118.46 (14) | C11—C12—C13 | 120.20 (15) |
| C2—C3—H3 | 120.8 | C11—C12—H12 | 119.9 |
| C4—C3—H3 | 120.8 | C13—C12—H12 | 119.9 |
| C5—C4—C3 | 121.02 (15) | C8—C13—C12 | 118.69 (14) |
| C5—C4—H4 | 119.5 | C8—C13—H13 | 120.7 |
| C3—C4—H4 | 119.5 | C12—C13—H13 | 120.7 |
| C4—C5—C6 | 119.30 (15) | ||
| O1—P1—O2—C2 | 50.74 (12) | C4—C5—C6—C7 | 0.1 (2) |
| O3—P1—O2—C2 | 172.62 (10) | C3—C2—C7—C6 | 0.5 (2) |
| N1—P1—O2—C2 | −77.81 (11) | O2—C2—C7—C6 | −177.80 (12) |
| O1—P1—O3—C8 | −61.57 (11) | C5—C6—C7—C2 | −0.6 (2) |
| O2—P1—O3—C8 | 178.47 (10) | P1—O3—C8—C13 | 85.76 (15) |
| N1—P1—O3—C8 | 65.73 (11) | P1—O3—C8—C9 | −98.12 (14) |
| O1—P1—N1—C1 | −170.21 (11) | C13—C8—C9—C10 | −0.2 (2) |
| O3—P1—N1—C1 | 60.14 (13) | O3—C8—C9—C10 | −176.17 (13) |
| O2—P1—N1—C1 | −40.78 (14) | C8—C9—C10—C11 | 0.5 (2) |
| P1—O2—C2—C7 | −153.60 (11) | C9—C10—C11—C12 | −0.5 (2) |
| P1—O2—C2—C3 | 28.15 (18) | C10—C11—C12—C13 | 0.2 (2) |
| C7—C2—C3—C4 | 0.1 (2) | C9—C8—C13—C12 | −0.1 (2) |
| O2—C2—C3—C4 | 178.21 (13) | O3—C8—C13—C12 | 175.92 (13) |
| C2—C3—C4—C5 | −0.6 (2) | C11—C12—C13—C8 | 0.0 (2) |
| C3—C4—C5—C6 | 0.5 (2) |
| H··· | ||||
| N1—H1 | 0.788 (18) | 2.141 (18) | 2.9106 (17) | 165.1 (18) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.788 (18) | 2.141 (18) | 2.9106 (17) | 165.1 (18) |
Symmetry code: (i) .