Literature DB >> 23125678

2-(4-Fluoro-phen-yl)-1-(4-methyl-phen-yl)-1H-phenanthro[9,10-d]imidazole.

S Rosepriya1, A Thiruvalluvar, R Sathishkumar, J Jayabharathi, Sema Oztürk Yildirim, R J Butcher.   

Abstract

The phenanthrene tricyclic ring system in the title mol-ecule, C(28)H(19)FN(2), is slightly skewed with a dihedral angle of 7.50 (6)° between the outer benzene rings. The p-tolyl and fluoro-benzene rings are twisted from the attached imidazole ring by 70.40 (7) and 28.33 (7)°, respectively. In the crystal, C-H⋯F hydrogen bonds link the mol-ecules into zigzag chains in [001], and weak C-H⋯π inter-actions further consolidate the crystal packing.

Entities:  

Year:  2012        PMID: 23125678      PMCID: PMC3470234          DOI: 10.1107/S1600536812037592

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Yuan et al. (2011 ▶); Rosepriya et al. (2011 ▶).

Experimental

Crystal data

C28H19FN2 M = 402.45 Monoclinic, a = 10.1809 (2) Å b = 10.7654 (2) Å c = 18.4871 (3) Å β = 96.115 (1)° V = 2014.68 (6) Å3 Z = 4 Cu Kα radiation μ = 0.67 mm−1 T = 123 K 0.45 × 0.35 × 0.25 mm

Data collection

Agilent Xcalibur Ruby Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012 ▶) T min = 0.753, T max = 0.850 8155 measured reflections 4054 independent reflections 3619 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.106 S = 1.03 4054 reflections 281 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR2011 (Burla et al., 2012 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812037592/cv5332sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812037592/cv5332Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812037592/cv5332Isup3.cdx Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H19FN2F(000) = 840
Mr = 402.45Dx = 1.327 Mg m3
Monoclinic, P21/cMelting point: 494 K
Hall symbol: -P 2ybcCu Kα radiation, λ = 1.54184 Å
a = 10.1809 (2) ÅCell parameters from 4975 reflections
b = 10.7654 (2) Åθ = 4.1–75.3°
c = 18.4871 (3) ŵ = 0.67 mm1
β = 96.115 (1)°T = 123 K
V = 2014.68 (6) Å3Block, colourless
Z = 40.45 × 0.35 × 0.25 mm
Agilent Xcalibur Ruby Gemini diffractometer4054 independent reflections
Radiation source: Enhance (Cu) X-ray Source3619 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
Detector resolution: 10.5081 pixels mm-1θmax = 75.5°, θmin = 4.4°
ω scansh = −11→12
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2012)k = −11→13
Tmin = 0.753, Tmax = 0.850l = −22→13
8155 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0517P)2 + 0.6604P] where P = (Fo2 + 2Fc2)/3
4054 reflections(Δ/σ)max = 0.001
281 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
F40.18868 (10)0.04100 (8)−0.00640 (5)0.0413 (3)
N10.22790 (10)0.50374 (10)0.22352 (5)0.0213 (3)
N30.32302 (10)0.57512 (10)0.12764 (6)0.0230 (3)
C20.26496 (12)0.47886 (12)0.15502 (7)0.0222 (3)
C40.32401 (12)0.66606 (12)0.18005 (6)0.0213 (3)
C50.26743 (12)0.62474 (11)0.24026 (6)0.0207 (3)
C60.26588 (12)0.69804 (12)0.30544 (6)0.0212 (3)
C70.22497 (13)0.65420 (12)0.37131 (7)0.0253 (3)
C80.23298 (14)0.72837 (13)0.43239 (7)0.0282 (4)
C90.28381 (14)0.84865 (13)0.43030 (7)0.0299 (4)
C100.32612 (13)0.89271 (13)0.36685 (7)0.0273 (4)
C110.31801 (12)0.82110 (12)0.30268 (7)0.0223 (3)
C120.36582 (12)0.86934 (12)0.23605 (7)0.0227 (3)
C130.40522 (13)0.99443 (13)0.22925 (7)0.0266 (4)
C140.44945 (13)1.03779 (13)0.16616 (8)0.0296 (4)
C150.45837 (13)0.95801 (14)0.10720 (7)0.0298 (4)
C160.41987 (13)0.83594 (13)0.11144 (7)0.0260 (4)
C170.37198 (12)0.79098 (12)0.17515 (7)0.0221 (3)
C180.17293 (12)0.41523 (12)0.27015 (6)0.0214 (3)
C190.04292 (13)0.42709 (13)0.28571 (7)0.0258 (4)
C20−0.00771 (13)0.34031 (13)0.33123 (7)0.0287 (4)
C210.06862 (14)0.24164 (13)0.36048 (7)0.0286 (4)
C220.19820 (14)0.23184 (13)0.34311 (7)0.0286 (4)
C230.25117 (13)0.31826 (12)0.29870 (7)0.0247 (3)
C240.24119 (12)0.36103 (12)0.11511 (7)0.0231 (3)
C250.13499 (13)0.28159 (13)0.12329 (7)0.0276 (4)
C260.11766 (14)0.17314 (13)0.08261 (7)0.0299 (4)
C270.20587 (15)0.14662 (13)0.03352 (7)0.0291 (4)
C280.31057 (14)0.22303 (13)0.02274 (7)0.0297 (4)
C290.32810 (13)0.33064 (13)0.06400 (7)0.0263 (4)
C300.01479 (16)0.14695 (15)0.41001 (8)0.0383 (4)
H70.192020.573890.373600.0303*
H80.204420.698190.475180.0339*
H90.289040.898660.471520.0358*
H100.361230.972410.366290.0327*
H130.401151.048450.268210.0319*
H140.473571.120730.162700.0355*
H150.490320.987440.065140.0357*
H160.425500.783020.072130.0312*
H19−0.009490.492040.266010.0310*
H20−0.094280.348490.342300.0344*
H220.250280.165870.361710.0343*
H230.338210.311090.288270.0296*
H250.075400.301570.156280.0331*
H260.047840.119680.088520.0358*
H280.368090.20301−0.011340.0356*
H290.398430.383210.057610.0315*
H30A−0.073570.169500.418360.0575*
H30B0.069690.144700.455550.0575*
H30C0.014040.066500.387570.0575*
U11U22U33U12U13U23
F40.0566 (6)0.0297 (4)0.0377 (5)0.0015 (4)0.0052 (4)−0.0148 (4)
N10.0245 (5)0.0200 (5)0.0198 (5)−0.0001 (4)0.0042 (4)−0.0014 (4)
N30.0239 (5)0.0235 (5)0.0219 (5)0.0008 (4)0.0038 (4)−0.0008 (4)
C20.0226 (6)0.0242 (6)0.0201 (6)0.0027 (5)0.0037 (4)−0.0003 (5)
C40.0213 (5)0.0230 (6)0.0196 (5)0.0018 (5)0.0023 (4)0.0005 (5)
C50.0209 (5)0.0198 (6)0.0213 (6)0.0009 (5)0.0020 (4)0.0005 (5)
C60.0216 (5)0.0219 (6)0.0202 (6)0.0023 (5)0.0021 (4)−0.0002 (5)
C70.0284 (6)0.0237 (6)0.0241 (6)−0.0009 (5)0.0049 (5)0.0008 (5)
C80.0342 (7)0.0306 (7)0.0206 (6)0.0003 (5)0.0063 (5)−0.0007 (5)
C90.0395 (7)0.0275 (7)0.0225 (6)0.0023 (6)0.0030 (5)−0.0052 (5)
C100.0330 (7)0.0211 (6)0.0276 (6)−0.0001 (5)0.0024 (5)−0.0022 (5)
C110.0226 (6)0.0213 (6)0.0227 (6)0.0026 (5)0.0013 (4)0.0002 (5)
C120.0207 (5)0.0228 (6)0.0241 (6)0.0002 (5)0.0005 (4)0.0023 (5)
C130.0274 (6)0.0245 (7)0.0275 (6)−0.0026 (5)0.0009 (5)−0.0001 (5)
C140.0289 (6)0.0247 (7)0.0344 (7)−0.0052 (5)−0.0002 (5)0.0066 (6)
C150.0282 (7)0.0346 (7)0.0266 (6)−0.0038 (5)0.0033 (5)0.0086 (6)
C160.0243 (6)0.0305 (7)0.0230 (6)−0.0003 (5)0.0021 (5)0.0028 (5)
C170.0189 (5)0.0245 (6)0.0226 (6)0.0012 (5)0.0011 (4)0.0025 (5)
C180.0258 (6)0.0204 (6)0.0184 (5)−0.0032 (5)0.0039 (4)−0.0021 (5)
C190.0253 (6)0.0271 (7)0.0251 (6)0.0011 (5)0.0027 (5)−0.0011 (5)
C200.0241 (6)0.0356 (7)0.0270 (6)−0.0064 (5)0.0054 (5)−0.0034 (6)
C210.0352 (7)0.0285 (7)0.0218 (6)−0.0104 (5)0.0021 (5)−0.0013 (5)
C220.0350 (7)0.0238 (7)0.0267 (6)0.0010 (5)0.0017 (5)0.0019 (5)
C230.0255 (6)0.0251 (6)0.0239 (6)0.0002 (5)0.0045 (5)−0.0021 (5)
C240.0264 (6)0.0230 (6)0.0198 (6)0.0028 (5)0.0017 (4)−0.0002 (5)
C250.0295 (6)0.0286 (7)0.0252 (6)−0.0005 (5)0.0057 (5)−0.0048 (5)
C260.0338 (7)0.0268 (7)0.0289 (7)−0.0032 (5)0.0029 (5)−0.0023 (5)
C270.0399 (7)0.0221 (6)0.0242 (6)0.0051 (5)−0.0013 (5)−0.0058 (5)
C280.0345 (7)0.0316 (7)0.0237 (6)0.0083 (6)0.0066 (5)−0.0030 (5)
C290.0274 (6)0.0275 (7)0.0241 (6)0.0027 (5)0.0039 (5)0.0000 (5)
C300.0428 (8)0.0407 (8)0.0313 (7)−0.0165 (7)0.0031 (6)0.0049 (6)
F4—C271.3567 (16)C21—C301.512 (2)
N1—C21.3855 (16)C22—C231.3874 (19)
N1—C51.3885 (16)C24—C251.3993 (18)
N1—C181.4377 (16)C24—C291.4003 (18)
N3—C21.3203 (17)C25—C261.3898 (19)
N3—C41.3767 (16)C26—C271.373 (2)
C2—C241.4744 (18)C27—C281.378 (2)
C4—C51.3803 (16)C28—C291.3881 (19)
C4—C171.4369 (18)C7—H70.9300
C5—C61.4419 (16)C8—H80.9300
C6—C71.4097 (17)C9—H90.9300
C6—C111.4301 (18)C10—H100.9300
C7—C81.3783 (18)C13—H130.9300
C8—C91.397 (2)C14—H140.9300
C9—C101.3763 (19)C15—H150.9300
C10—C111.4098 (18)C16—H160.9300
C11—C121.4669 (18)C19—H190.9300
C12—C131.4145 (19)C20—H200.9300
C12—C171.4136 (18)C22—H220.9300
C13—C141.3758 (19)C23—H230.9300
C14—C151.398 (2)C25—H250.9300
C15—C161.376 (2)C26—H260.9300
C16—C171.4077 (18)C28—H280.9300
C18—C191.3900 (18)C29—H290.9300
C18—C231.3832 (18)C30—H30A0.9600
C19—C201.3925 (19)C30—H30B0.9600
C20—C211.391 (2)C30—H30C0.9600
C21—C221.395 (2)
C2—N1—C5106.52 (10)C24—C25—C26120.66 (12)
C2—N1—C18125.54 (10)C25—C26—C27118.56 (13)
C5—N1—C18127.60 (10)F4—C27—C26118.57 (13)
C2—N3—C4104.97 (11)F4—C27—C28118.60 (12)
N1—C2—N3112.04 (11)C26—C27—C28122.83 (13)
N1—C2—C24125.28 (11)C27—C28—C29118.36 (13)
N3—C2—C24122.66 (11)C24—C29—C28120.82 (12)
N3—C4—C5111.47 (11)C6—C7—H7119.00
N3—C4—C17126.74 (11)C8—C7—H7119.00
C5—C4—C17121.76 (11)C7—C8—H8120.00
N1—C5—C4104.98 (10)C9—C8—H8120.00
N1—C5—C6132.14 (11)C8—C9—H9120.00
C4—C5—C6122.70 (11)C10—C9—H9120.00
C5—C6—C7124.70 (12)C9—C10—H10119.00
C5—C6—C11116.11 (10)C11—C10—H10119.00
C7—C6—C11119.07 (11)C12—C13—H13119.00
C6—C7—C8121.11 (12)C14—C13—H13119.00
C7—C8—C9120.28 (12)C13—C14—H14120.00
C8—C9—C10119.58 (12)C15—C14—H14120.00
C9—C10—C11122.22 (13)C14—C15—H15120.00
C6—C11—C10117.73 (11)C16—C15—H15120.00
C6—C11—C12121.03 (11)C15—C16—H16120.00
C10—C11—C12121.21 (12)C17—C16—H16120.00
C11—C12—C13122.30 (12)C18—C19—H19120.00
C11—C12—C17120.29 (11)C20—C19—H19120.00
C13—C12—C17117.41 (12)C19—C20—H20119.00
C12—C13—C14121.32 (12)C21—C20—H20119.00
C13—C14—C15120.45 (13)C21—C22—H22119.00
C14—C15—C16119.98 (12)C23—C22—H22119.00
C15—C16—C17120.15 (12)C18—C23—H23120.00
C4—C17—C12117.65 (11)C22—C23—H23120.00
C4—C17—C16121.66 (12)C24—C25—H25120.00
C12—C17—C16120.66 (12)C26—C25—H25120.00
N1—C18—C19120.22 (11)C25—C26—H26121.00
N1—C18—C23118.94 (11)C27—C26—H26121.00
C19—C18—C23120.85 (12)C27—C28—H28121.00
C18—C19—C20119.04 (12)C29—C28—H28121.00
C19—C20—C21121.32 (12)C24—C29—H29120.00
C20—C21—C22118.12 (12)C28—C29—H29120.00
C20—C21—C30121.79 (13)C21—C30—H30A109.00
C22—C21—C30120.09 (13)C21—C30—H30B109.00
C21—C22—C23121.49 (13)C21—C30—H30C109.00
C18—C23—C22119.18 (12)H30A—C30—H30B109.00
C2—C24—C25124.00 (11)H30A—C30—H30C109.00
C2—C24—C29117.18 (11)H30B—C30—H30C109.00
C25—C24—C29118.76 (12)
C5—N1—C2—N3−0.67 (14)C7—C8—C9—C10−0.1 (2)
C5—N1—C2—C24−179.32 (12)C8—C9—C10—C111.1 (2)
C18—N1—C2—N3−174.41 (11)C9—C10—C11—C6−1.14 (19)
C18—N1—C2—C246.95 (19)C9—C10—C11—C12−178.96 (13)
C2—N1—C5—C41.00 (13)C6—C11—C12—C13173.38 (12)
C2—N1—C5—C6−174.12 (13)C6—C11—C12—C17−5.61 (18)
C18—N1—C5—C4174.57 (11)C10—C11—C12—C13−8.88 (19)
C18—N1—C5—C6−0.6 (2)C10—C11—C12—C17172.14 (12)
C2—N1—C18—C19−112.80 (14)C11—C12—C13—C14−179.83 (12)
C2—N1—C18—C2366.83 (16)C17—C12—C13—C14−0.82 (19)
C5—N1—C18—C1974.79 (16)C11—C12—C17—C43.00 (18)
C5—N1—C18—C23−105.58 (15)C11—C12—C17—C16−178.90 (12)
C4—N3—C2—N10.03 (13)C13—C12—C17—C4−176.03 (11)
C4—N3—C2—C24178.71 (11)C13—C12—C17—C162.07 (18)
C2—N3—C4—C50.65 (14)C12—C13—C14—C15−1.0 (2)
C2—N3—C4—C17−177.29 (12)C13—C14—C15—C161.5 (2)
N1—C2—C24—C2528.9 (2)C14—C15—C16—C17−0.3 (2)
N1—C2—C24—C29−153.74 (12)C15—C16—C17—C4176.46 (12)
N3—C2—C24—C25−149.60 (13)C15—C16—C17—C12−1.56 (19)
N3—C2—C24—C2927.75 (18)N1—C18—C19—C20−179.79 (11)
N3—C4—C5—N1−1.05 (14)C23—C18—C19—C200.59 (19)
N3—C4—C5—C6174.66 (11)N1—C18—C23—C22−179.33 (11)
C17—C4—C5—N1177.01 (11)C19—C18—C23—C220.30 (19)
C17—C4—C5—C6−7.28 (19)C18—C19—C20—C21−0.8 (2)
N3—C4—C17—C12−178.97 (12)C19—C20—C21—C220.2 (2)
N3—C4—C17—C162.9 (2)C19—C20—C21—C30179.94 (13)
C5—C4—C17—C123.28 (18)C20—C21—C22—C230.8 (2)
C5—C4—C17—C16−174.80 (12)C30—C21—C22—C23−179.02 (13)
N1—C5—C6—C73.0 (2)C21—C22—C23—C18−1.0 (2)
N1—C5—C6—C11178.89 (12)C2—C24—C25—C26178.69 (12)
C4—C5—C6—C7−171.39 (12)C29—C24—C25—C261.39 (19)
C4—C5—C6—C114.49 (18)C2—C24—C29—C28−178.28 (12)
C5—C6—C7—C8176.56 (13)C25—C24—C29—C28−0.8 (2)
C11—C6—C7—C80.80 (19)C24—C25—C26—C27−0.9 (2)
C5—C6—C11—C10−175.94 (11)C25—C26—C27—F4−179.75 (12)
C5—C6—C11—C121.88 (17)C25—C26—C27—C28−0.2 (2)
C7—C6—C11—C100.18 (18)F4—C27—C28—C29−179.67 (12)
C7—C6—C11—C12178.00 (12)C26—C27—C28—C290.8 (2)
C6—C7—C8—C9−0.9 (2)C27—C28—C29—C24−0.3 (2)
D—H···AD—HH···AD···AD—H···A
C7—H7···F4i0.932.543.1371 (16)122
C14—H14···Cg2ii0.932.953.5613 (15)125
C20—H20···Cg2iii0.932.843.4540 (14)125
C23—H23···Cg3iv0.932.813.5709 (14)140
C30—H30A···Cg1iii0.962.913.4294 (17)115
C30—H30B···Cg4i0.962.773.6659 (16)155
Table 1

Hydrogen-bond geometry (Å, °)

Cg1, Cg2, Cg3 and Cg4 are the centroids of the N1/C2/N3/C4/C5, C4–C6/C11/C12/C17, C12–C17 and C24–C29 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C7—H7⋯F4i 0.932.543.1371 (16)122
C14—H14⋯Cg2ii 0.932.953.5613 (15)125
C20—H20⋯Cg2iii 0.932.843.4540 (14)125
C23—H23⋯Cg3iv 0.932.813.5709 (14)140
C30—H30ACg1iii 0.962.913.4294 (17)115
C30—H30BCg4i 0.962.773.6659 (16)155

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-(4-Fluoro-phen-yl)-1-phenyl-1H-imidazo[4,5-f][1,10]phenanthroline monohydrate.

Authors:  S Rosepriya; M Venkatesh Perumal; A Thiruvalluvar; J Jayabharathi; R J Butcher; J P Jasinski; J A Golen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-09

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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