Literature DB >> 23125648

(3,4-Dimeth-oxy-phen-yl)[2-(thio-phen-2-ylcarbon-yl)phen-yl]methanone.

G Ganesh1, R Sivasakthikumaran, E Govindan, A K Mohana Krishnan, A Subbiahpandi.   

Abstract

In the title compound, C(20)H(16)O(4)S, the thiophene ring makes dihedral angles of 72.9 (2) and 60.5 (2)°, respectively, with the dimethoxy benzene and phenyl rings. In the crystal, C-H⋯O hydrogen bonds link the mol-ecules into a C(9) chain along the b axis. The S and C atoms of the thio-phene ring are disordered over two sets of sites [site occupancies = 0.675 (3) and 0.325 (3)]. A short inter-molecular S⋯O contact [3.084 (2) Å] is observed in the crystal structure, which also features C-H⋯π inter-actions.

Entities:  

Year:  2012        PMID: 23125648      PMCID: PMC3470204          DOI: 10.1107/S1600536812037336

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to thio­phene derivatives and their biological activity, see: Bonini et al. (2005 ▶); Khan et al. (2009 ▶); Brault et al. (2005 ▶); Isloora et al. (2010 ▶); Xia et al. (2010 ▶). For related structures, see: Asiri et al. (2010 ▶); Aslam et al. (2011 ▶).

Experimental

Crystal data

C20H16O4S M = 352.40 Orthorhombic, a = 15.7324 (6) Å b = 10.7988 (5) Å c = 20.4877 (11) Å V = 3480.7 (3) Å3 Z = 8 Mo Kα radiation μ = 0.21 mm−1 T = 293 K 0.25 × 0.22 × 0.19 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.950, T max = 0.961 22015 measured reflections 4469 independent reflections 2968 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.107 S = 1.03 4469 reflections 236 parameters 4 restraints H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812037336/bt5963sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812037336/bt5963Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812037336/bt5963Isup3.mol Supplementary material file. DOI: 10.1107/S1600536812037336/bt5963Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H16O4SF(000) = 1472
Mr = 352.40Dx = 1.345 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 4469 reflections
a = 15.7324 (6) Åθ = 2.4–28.6°
b = 10.7988 (5) ŵ = 0.21 mm1
c = 20.4877 (11) ÅT = 293 K
V = 3480.7 (3) Å3Block, white crystalline
Z = 80.25 × 0.22 × 0.19 mm
Bruker APEXII CCD area-detector diffractometer4469 independent reflections
Radiation source: fine-focus sealed tube2968 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.029
ω and φ scansθmax = 28.6°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −21→12
Tmin = 0.950, Tmax = 0.961k = −14→13
22015 measured reflectionsl = −26→27
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.107w = 1/[σ2(Fo2) + (0.0418P)2 + 0.6807P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
4469 reflectionsΔρmax = 0.19 e Å3
236 parametersΔρmin = −0.20 e Å3
4 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0032 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C10.07420 (12)0.29212 (17)0.52465 (9)0.0702 (5)
H1A0.09270.27500.56840.105*
H1B0.09390.22780.49600.105*
H1C0.01320.29530.52350.105*
C20.08842 (9)0.44770 (14)0.44314 (7)0.0447 (3)
C30.03902 (9)0.38431 (14)0.39886 (7)0.0487 (4)
H30.01650.30750.40990.058*
C40.02285 (9)0.43475 (14)0.33805 (7)0.0471 (3)
H4−0.01100.39170.30860.056*
C50.05654 (8)0.54875 (13)0.32047 (7)0.0419 (3)
C60.10764 (8)0.61269 (13)0.36538 (7)0.0432 (3)
H60.13130.68850.35390.052*
C70.12280 (9)0.56397 (14)0.42603 (7)0.0448 (3)
C80.20416 (12)0.73733 (16)0.46082 (9)0.0669 (5)
H8A0.23640.76490.49790.100*
H8B0.15840.79420.45280.100*
H8C0.24040.73370.42320.100*
C10−0.02731 (9)0.55919 (13)0.21288 (7)0.0432 (3)
C11−0.10859 (9)0.55142 (16)0.23926 (9)0.0567 (4)
H11−0.11640.56290.28380.068*
C12−0.17778 (10)0.52680 (18)0.19982 (10)0.0672 (5)
H12−0.23200.52290.21780.081*
C13−0.16671 (11)0.50815 (17)0.13424 (10)0.0664 (5)
H13−0.21340.49120.10790.080*
C14−0.08662 (10)0.51440 (15)0.10716 (8)0.0567 (4)
H14−0.07960.50110.06260.068*
C15−0.01622 (9)0.54042 (13)0.14591 (7)0.0443 (3)
C160.06748 (10)0.54873 (14)0.11162 (7)0.0496 (4)
C170.13814 (9)0.47030 (14)0.13224 (7)0.0464 (3)
C90.04505 (9)0.60239 (13)0.25482 (7)0.0436 (3)
O10.10795 (7)0.40790 (11)0.50401 (5)0.0615 (3)
O20.17058 (8)0.61823 (10)0.47356 (5)0.0634 (3)
O30.09238 (7)0.68272 (10)0.23367 (5)0.0606 (3)
O40.07382 (8)0.61470 (13)0.06358 (6)0.0795 (4)
C190.22592 (12)0.31667 (19)0.17820 (10)0.0741 (5)
H190.24190.25110.20500.089*
C200.27476 (11)0.37328 (19)0.13340 (10)0.0747 (6)
H200.33090.35010.12630.090*
S10.22947 (5)0.48657 (9)0.09150 (7)0.0691 (3)0.675 (3)
C180.1412 (3)0.3789 (4)0.1768 (2)0.0592 (17)*0.675 (3)
H180.09590.35710.20360.071*0.675 (3)
S1'0.13250 (13)0.3528 (2)0.18931 (11)0.0487 (5)0.325 (3)
C18'0.2189 (6)0.4727 (13)0.1078 (7)0.160 (9)*0.325 (3)
H18'0.23730.53160.07780.192*0.325 (3)
U11U22U33U12U13U23
C10.0799 (12)0.0676 (11)0.0631 (11)0.0014 (9)0.0013 (9)0.0211 (9)
C20.0434 (7)0.0473 (8)0.0434 (8)0.0063 (6)0.0002 (6)0.0017 (6)
C30.0491 (8)0.0439 (8)0.0530 (9)−0.0046 (6)−0.0002 (7)0.0035 (7)
C40.0457 (8)0.0474 (8)0.0481 (8)−0.0060 (6)−0.0023 (6)−0.0029 (7)
C50.0387 (7)0.0450 (8)0.0420 (7)0.0002 (6)0.0029 (6)−0.0017 (6)
C60.0409 (7)0.0412 (7)0.0475 (8)−0.0024 (6)0.0012 (6)−0.0024 (6)
C70.0410 (7)0.0457 (8)0.0477 (8)0.0011 (6)−0.0031 (6)−0.0060 (7)
C80.0731 (11)0.0563 (10)0.0713 (11)−0.0111 (9)−0.0122 (9)−0.0112 (9)
C100.0414 (7)0.0428 (8)0.0455 (8)0.0021 (6)0.0003 (6)0.0048 (6)
C110.0468 (8)0.0665 (10)0.0567 (9)0.0039 (7)0.0043 (7)0.0047 (8)
C120.0392 (9)0.0766 (12)0.0860 (13)0.0023 (8)−0.0010 (8)0.0088 (10)
C130.0522 (10)0.0669 (11)0.0801 (13)0.0023 (8)−0.0214 (9)0.0003 (10)
C140.0617 (10)0.0565 (10)0.0520 (9)0.0055 (8)−0.0131 (8)−0.0006 (8)
C150.0479 (8)0.0403 (7)0.0448 (8)0.0039 (6)−0.0027 (6)0.0035 (6)
C160.0590 (9)0.0486 (8)0.0411 (8)0.0023 (7)0.0036 (7)0.0010 (7)
C170.0464 (8)0.0490 (8)0.0438 (8)−0.0003 (6)0.0065 (6)−0.0059 (7)
C90.0436 (7)0.0431 (7)0.0441 (8)0.0003 (6)0.0049 (6)−0.0030 (6)
O10.0726 (7)0.0614 (7)0.0506 (6)−0.0004 (6)−0.0104 (5)0.0102 (5)
O20.0760 (8)0.0576 (7)0.0565 (7)−0.0122 (6)−0.0208 (6)−0.0018 (5)
O30.0676 (7)0.0615 (7)0.0527 (6)−0.0207 (6)0.0014 (5)0.0064 (5)
O40.0883 (9)0.0898 (9)0.0605 (7)0.0172 (7)0.0181 (7)0.0303 (7)
C190.0794 (13)0.0703 (12)0.0724 (12)0.0139 (10)−0.0122 (10)−0.0096 (10)
C200.0453 (9)0.0834 (13)0.0954 (15)0.0117 (9)0.0010 (10)−0.0217 (12)
S10.0501 (4)0.0695 (5)0.0876 (6)0.0022 (3)0.0239 (4)−0.0130 (4)
S1'0.0502 (9)0.0473 (9)0.0485 (9)0.0120 (7)0.0026 (7)0.0027 (8)
C1—O11.423 (2)C11—H110.9300
C1—H1A0.9600C12—C131.370 (3)
C1—H1B0.9600C12—H120.9300
C1—H1C0.9600C13—C141.378 (2)
C2—O11.3544 (17)C13—H130.9300
C2—C31.377 (2)C14—C151.391 (2)
C2—C71.411 (2)C14—H140.9300
C3—C41.383 (2)C15—C161.495 (2)
C3—H30.9300C16—O41.2191 (18)
C4—C51.388 (2)C16—C171.460 (2)
C4—H40.9300C17—C181.345 (4)
C5—C61.4034 (19)C17—C18'1.366 (9)
C5—C91.4756 (19)C17—S11.6709 (17)
C6—C71.370 (2)C17—S1'1.728 (3)
C6—H60.9300C9—O31.2225 (16)
C7—O21.3625 (17)C19—C201.344 (3)
C8—O21.415 (2)C19—C181.493 (5)
C8—H8A0.9600C19—S1'1.538 (3)
C8—H8B0.9600C19—H190.9300
C8—H8C0.9600C20—C18'1.483 (10)
C10—C111.391 (2)C20—S11.656 (2)
C10—C151.3979 (19)C20—H200.9300
C10—C91.501 (2)C18—H180.9300
C11—C121.382 (2)C18'—H18'0.9300
O1—C1—H1A109.5C13—C14—H14119.7
O1—C1—H1B109.5C15—C14—H14119.7
H1A—C1—H1B109.5C14—C15—C10119.35 (14)
O1—C1—H1C109.5C14—C15—C16116.43 (13)
H1A—C1—H1C109.5C10—C15—C16124.22 (13)
H1B—C1—H1C109.5O4—C16—C17120.68 (14)
O1—C2—C3125.24 (14)O4—C16—C15119.11 (14)
O1—C2—C7115.09 (13)C17—C16—C15119.99 (13)
C3—C2—C7119.67 (13)C18—C17—C18'103.3 (6)
C2—C3—C4120.10 (14)C18—C17—C16130.5 (2)
C2—C3—H3120.0C18'—C17—C16126.3 (5)
C4—C3—H3120.0C18—C17—S1112.7 (2)
C3—C4—C5120.85 (13)C18'—C17—S110.0 (5)
C3—C4—H4119.6C16—C17—S1116.69 (11)
C5—C4—H4119.6C18—C17—S1'5.0 (3)
C4—C5—C6119.02 (13)C18'—C17—S1'108.0 (5)
C4—C5—C9122.54 (13)C16—C17—S1'125.64 (12)
C6—C5—C9118.33 (12)S1—C17—S1'117.35 (12)
C7—C6—C5120.35 (13)O3—C9—C5121.81 (13)
C7—C6—H6119.8O3—C9—C10118.66 (13)
C5—C6—H6119.8C5—C9—C10119.52 (12)
O2—C7—C6125.38 (13)C2—O1—C1117.90 (13)
O2—C7—C2114.62 (13)C7—O2—C8117.72 (12)
C6—C7—C2120.00 (13)C20—C19—C18107.0 (2)
O2—C8—H8A109.5C20—C19—S1'122.1 (2)
O2—C8—H8B109.5C18—C19—S1'15.25 (19)
H8A—C8—H8B109.5C20—C19—H19126.5
O2—C8—H8C109.5C18—C19—H19126.5
H8A—C8—H8C109.5S1'—C19—H19111.3
H8B—C8—H8C109.5C19—C20—C18'103.4 (4)
C11—C10—C15119.17 (14)C19—C20—S1116.37 (14)
C11—C10—C9119.58 (13)C18'—C20—S113.3 (4)
C15—C10—C9120.83 (13)C19—C20—H20121.8
C12—C11—C10120.58 (16)C18'—C20—H20134.6
C12—C11—H11119.7S1—C20—H20121.8
C10—C11—H11119.7C20—S1—C1791.91 (11)
C13—C12—C11120.11 (16)C17—C18—C19112.0 (3)
C13—C12—H12119.9C17—C18—H18124.0
C11—C12—H12119.9C19—C18—H18124.0
C12—C13—C14120.26 (16)C19—S1'—C1792.13 (16)
C12—C13—H13119.9C17—C18'—C20114.1 (8)
C14—C13—H13119.9C17—C18'—H18'123.0
C13—C14—C15120.52 (16)C20—C18'—H18'123.0
O1—C2—C3—C4179.55 (13)C4—C5—C9—C1021.6 (2)
C7—C2—C3—C4−0.3 (2)C6—C5—C9—C10−162.15 (12)
C2—C3—C4—C50.6 (2)C11—C10—C9—O3−131.30 (15)
C3—C4—C5—C60.1 (2)C15—C10—C9—O341.2 (2)
C3—C4—C5—C9176.30 (13)C11—C10—C9—C547.76 (19)
C4—C5—C6—C7−1.1 (2)C15—C10—C9—C5−139.72 (14)
C9—C5—C6—C7−177.44 (12)C3—C2—O1—C1−0.8 (2)
C5—C6—C7—O2−179.37 (13)C7—C2—O1—C1179.09 (14)
C5—C6—C7—C21.3 (2)C6—C7—O2—C83.2 (2)
O1—C2—C7—O20.10 (18)C2—C7—O2—C8−177.42 (14)
C3—C2—C7—O2179.99 (13)C18—C19—C20—C18'2.3 (7)
O1—C2—C7—C6179.46 (12)S1'—C19—C20—C18'4.5 (7)
C3—C2—C7—C6−0.6 (2)C18—C19—C20—S1−1.0 (3)
C15—C10—C11—C12−0.7 (2)S1'—C19—C20—S11.2 (3)
C9—C10—C11—C12171.96 (15)C19—C20—S1—C171.00 (17)
C10—C11—C12—C130.9 (3)C18'—C20—S1—C17−13 (3)
C11—C12—C13—C14−0.3 (3)C18—C17—S1—C20−0.7 (3)
C12—C13—C14—C15−0.4 (3)C18'—C17—S1—C2019 (4)
C13—C14—C15—C100.5 (2)C16—C17—S1—C20−176.59 (13)
C13—C14—C15—C16−178.31 (15)S1'—C17—S1—C20−2.63 (14)
C11—C10—C15—C140.0 (2)C18'—C17—C18—C19−3.2 (8)
C9—C10—C15—C14−172.56 (13)C16—C17—C18—C19175.46 (19)
C11—C10—C15—C16178.76 (14)S1—C17—C18—C190.3 (4)
C9—C10—C15—C166.2 (2)S1'—C17—C18—C19160 (3)
C14—C15—C16—O450.8 (2)C20—C19—C18—C170.4 (4)
C10—C15—C16—O4−127.95 (17)S1'—C19—C18—C17−172.7 (12)
C14—C15—C16—C17−123.81 (15)C20—C19—S1'—C17−2.5 (2)
C10—C15—C16—C1757.4 (2)C18—C19—S1'—C175.3 (9)
O4—C16—C17—C18−169.2 (3)C18—C17—S1'—C19−18 (3)
C15—C16—C17—C185.4 (4)C18'—C17—S1'—C19−0.7 (8)
O4—C16—C17—C18'9.2 (9)C16—C17—S1'—C19176.50 (15)
C15—C16—C17—C18'−176.3 (9)S1—C17—S1'—C193.15 (16)
O4—C16—C17—S15.9 (2)C18—C17—C18'—C204.8 (13)
C15—C16—C17—S1−179.57 (11)C16—C17—C18'—C20−173.9 (6)
O4—C16—C17—S1'−167.53 (16)S1—C17—C18'—C20−157 (5)
C15—C16—C17—S1'7.0 (2)S1'—C17—C18'—C203.3 (13)
C4—C5—C9—O3−159.37 (14)C19—C20—C18'—C17−4.7 (13)
C6—C5—C9—O316.9 (2)S1—C20—C18'—C17162 (4)
D—H···AD—HH···AD···AD—H···A
C3—H3···O4i0.932.583.496 (2)169
C1—H1A···Cg2ii0.962.993.799 (3)143
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the C17/C19/C20/S1′/C18′ ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3⋯O4i 0.932.583.496 (2)169
C1—H1ACg2ii 0.962.993.799 (3)143

Symmetry codes: (i) ; (ii) .

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