| Literature DB >> 23125615 |
Azadeh Tadjarodi1, Keyvan Bijanzad, Behrouz Notash.
Abstract
In the centrosymmetric dinuclear title compound, [Hg(2)Cl(4)(C(6)H(8)N(2))(2)], the Hg(II) ion is four-coordinated by one pyridine N atom from a 2-amino-4-methyl-pyridine ligand, one terminal Cl atom and two bridging Cl atoms. A distorted tetra-hedral geometry is formed around each Hg(II) ion. The crystal packing is stabilized by intra- and inter-molecular N-H⋯Cl hydrogen bonding. There are also π-π stacking inter-actions in the structure, with centroid-to-centroid distances of 3.594 (6) Å.Entities:
Year: 2012 PMID: 23125615 PMCID: PMC3470171 DOI: 10.1107/S1600536812039803
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H16Cl4Hg2N4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yac | Cell parameters from 2507 reflections |
| θ = 2.6–29.1° | |
| µ = 16.94 mm−1 | |
| β = 101.92 (3)° | Block, colorless |
| 0.25 × 0.25 × 0.20 mm | |
| Stoe IPDS 2T diffractometer | 2507 independent reflections |
| Radiation source: fine-focus sealed tube | 2019 reflections with |
| Graphite monochromator | |
| Detector resolution: 0.15 mm pixels mm-1 | θmax = 29.1°, θmin = 2.6° |
| rotation method scans | |
| Absorption correction: numerical shape of crystal determined optically | |
| 6495 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2507 reflections | (Δ/σ)max < 0.001 |
| 109 parameters | Δρmax = 2.35 e Å−3 |
| 2 restraints | Δρmin = −2.80 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Hg1 | 0.21238 (5) | 0.47797 (4) | 0.94011 (2) | 0.02164 (12) | |
| Cl1 | 0.3952 (3) | 0.6882 (3) | 0.98493 (15) | 0.0237 (4) | |
| Cl2 | 0.1382 (3) | 0.3856 (2) | 1.10331 (13) | 0.0205 (4) | |
| N1 | 0.1135 (11) | 0.2841 (9) | 0.8633 (5) | 0.0210 (15) | |
| N2 | 0.0000 (13) | 0.4145 (10) | 0.7272 (5) | 0.0278 (18) | |
| C1 | 0.0312 (12) | 0.2842 (11) | 0.7714 (6) | 0.0221 (18) | |
| C2 | −0.0152 (13) | 0.1524 (12) | 0.7224 (6) | 0.025 (2) | |
| H2 | −0.0709 | 0.1541 | 0.6572 | 0.030* | |
| C3 | 0.0199 (16) | 0.0208 (12) | 0.7685 (7) | 0.031 (2) | |
| C4 | −0.022 (2) | −0.1198 (14) | 0.7162 (8) | 0.046 (3) | |
| H4A | −0.1242 | −0.1048 | 0.6610 | 0.068* | |
| H4B | −0.0612 | −0.1931 | 0.7573 | 0.068* | |
| H4C | 0.0930 | −0.1536 | 0.6959 | 0.068* | |
| C5 | 0.0993 (15) | 0.0221 (12) | 0.8661 (7) | 0.028 (2) | |
| H5 | 0.1206 | −0.0662 | 0.9009 | 0.034* | |
| C6 | 0.1444 (14) | 0.1542 (11) | 0.9089 (6) | 0.0241 (18) | |
| H6 | 0.2003 | 0.1550 | 0.9741 | 0.029* | |
| H2A | −0.080 (14) | 0.429 (19) | 0.675 (5) | 0.06 (4)* | |
| H2B | −0.028 (19) | 0.495 (7) | 0.753 (9) | 0.03 (3)* |
| Hg1 | 0.02222 (18) | 0.0215 (2) | 0.01994 (17) | −0.00052 (14) | 0.00134 (11) | −0.00125 (13) |
| Cl1 | 0.0237 (10) | 0.0218 (12) | 0.0245 (10) | −0.0020 (8) | 0.0025 (8) | 0.0015 (8) |
| Cl2 | 0.0194 (9) | 0.0248 (11) | 0.0177 (8) | 0.0030 (8) | 0.0047 (7) | 0.0008 (7) |
| N1 | 0.021 (4) | 0.020 (4) | 0.022 (3) | −0.003 (3) | 0.005 (3) | −0.001 (3) |
| N2 | 0.040 (5) | 0.026 (5) | 0.016 (3) | 0.010 (4) | 0.001 (3) | −0.001 (3) |
| C1 | 0.010 (4) | 0.033 (5) | 0.024 (4) | 0.001 (3) | 0.005 (3) | 0.003 (3) |
| C2 | 0.020 (4) | 0.038 (6) | 0.017 (4) | −0.004 (4) | 0.006 (3) | −0.010 (4) |
| C3 | 0.038 (6) | 0.033 (6) | 0.026 (4) | −0.015 (4) | 0.017 (4) | −0.012 (4) |
| C4 | 0.073 (9) | 0.036 (7) | 0.033 (5) | −0.030 (6) | 0.023 (6) | −0.022 (5) |
| C5 | 0.033 (5) | 0.023 (5) | 0.031 (5) | 0.003 (4) | 0.014 (4) | 0.002 (4) |
| C6 | 0.025 (5) | 0.026 (5) | 0.019 (4) | 0.001 (4) | 0.002 (3) | 0.002 (3) |
| Hg1—N1 | 2.141 (8) | C2—C3 | 1.377 (16) |
| Hg1—Cl1 | 2.347 (2) | C2—H2 | 0.9500 |
| Hg1—Cl2 | 2.6755 (19) | C3—C5 | 1.417 (16) |
| Hg1—Cl2i | 2.763 (2) | C3—C4 | 1.496 (14) |
| Cl2—Hg1i | 2.763 (2) | C4—H4A | 0.9800 |
| N1—C1 | 1.345 (12) | C4—H4B | 0.9800 |
| N1—C6 | 1.359 (13) | C4—H4C | 0.9800 |
| N2—C1 | 1.353 (13) | C5—C6 | 1.369 (15) |
| N2—H2A | 0.87 (2) | C5—H5 | 0.9500 |
| N2—H2B | 0.87 (2) | C6—H6 | 0.9500 |
| C1—C2 | 1.407 (14) | ||
| N1—Hg1—Cl1 | 158.87 (19) | C3—C2—H2 | 119.8 |
| N1—Hg1—Cl2 | 95.45 (19) | C1—C2—H2 | 119.8 |
| Cl1—Hg1—Cl2 | 102.46 (7) | C2—C3—C5 | 118.4 (9) |
| N1—Hg1—Cl2i | 93.9 (2) | C2—C3—C4 | 120.6 (10) |
| Cl1—Hg1—Cl2i | 97.04 (8) | C5—C3—C4 | 120.9 (11) |
| Cl2—Hg1—Cl2i | 90.41 (7) | C3—C4—H4A | 109.5 |
| Hg1—Cl2—Hg1i | 89.59 (7) | C3—C4—H4B | 109.5 |
| C1—N1—C6 | 118.7 (9) | H4A—C4—H4B | 109.5 |
| C1—N1—Hg1 | 123.2 (7) | C3—C4—H4C | 109.5 |
| C6—N1—Hg1 | 118.0 (6) | H4A—C4—H4C | 109.5 |
| C1—N2—H2A | 125 (10) | H4B—C4—H4C | 109.5 |
| C1—N2—H2B | 125 (9) | C6—C5—C3 | 118.1 (10) |
| H2A—N2—H2B | 94 (10) | C6—C5—H5 | 121.0 |
| N1—C1—N2 | 117.9 (9) | C3—C5—H5 | 121.0 |
| N1—C1—C2 | 120.8 (9) | N1—C6—C5 | 123.6 (9) |
| N2—C1—C2 | 121.3 (8) | N1—C6—H6 | 118.2 |
| C3—C2—C1 | 120.3 (8) | C5—C6—H6 | 118.2 |
| N1—Hg1—Cl2—Hg1i | −94.0 (2) | C6—N1—C1—C2 | −2.5 (12) |
| Cl1—Hg1—Cl2—Hg1i | 97.30 (8) | Hg1—N1—C1—C2 | 174.1 (6) |
| Cl2i—Hg1—Cl2—Hg1i | 0.0 | N1—C1—C2—C3 | 1.2 (12) |
| Cl1—Hg1—N1—C1 | −64.4 (10) | N2—C1—C2—C3 | 179.2 (9) |
| Cl2—Hg1—N1—C1 | 147.6 (6) | C1—C2—C3—C5 | 1.4 (14) |
| Cl2i—Hg1—N1—C1 | 56.8 (6) | C1—C2—C3—C4 | −177.6 (9) |
| Cl1—Hg1—N1—C6 | 112.2 (7) | C2—C3—C5—C6 | −2.6 (15) |
| Cl2—Hg1—N1—C6 | −35.8 (6) | C4—C3—C5—C6 | 176.3 (9) |
| Cl2i—Hg1—N1—C6 | −126.6 (6) | C1—N1—C6—C5 | 1.2 (13) |
| C6—N1—C1—N2 | 179.4 (8) | Hg1—N1—C6—C5 | −175.6 (7) |
| Hg1—N1—C1—N2 | −4.0 (11) | C3—C5—C6—N1 | 1.4 (15) |
| H··· | ||||
| N2—H2 | 0.87 (2) | 2.62 (7) | 3.380 (8) | 146 (11) |
| N2—H2 | 0.87 (2) | 2.68 (11) | 3.379 (9) | 139 (13) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.87 (2) | 2.62 (7) | 3.380 (8) | 146 (11) |
| N2—H2 | 0.87 (2) | 2.68 (11) | 3.379 (9) | 139 (13) |
Symmetry codes: (i) ; (ii) .