Literature DB >> 23112189

Maintenance of gene silencing by the coordinate action of the H3K9 methyltransferase G9a/KMT1C and the H3K4 demethylase Jarid1a/KDM5A.

Chandra-Prakash Chaturvedi1, Brinda Somasundaram, Kulwant Singh, Richard L Carpenedo, William L Stanford, F Jeffrey Dilworth, Marjorie Brand.   

Abstract

Chromatin remodeling is essential for controlling the expression of genes during development. The histone-modifying enzyme G9a/KMT1C can act both as a coactivator and a corepressor of transcription. Here, we show that the dual function of G9a as a coactivator vs. a corepressor entails its association within two distinct protein complexes, one containing the coactivator Mediator and one containing the corepressor Jarid1a/KDM5A. Functionally, G9a is important in stabilizing the Mediator complex for gene activation, whereas its repressive function entails a coordinate action with the histone H3 lysine 4 (H3K4) demethylase Jarid1a for the maintenance of gene repression. The essential nature of cross-talk between the histone methyltransferase G9a and the demethylase Jarid1a is demonstrated on the embryonic E(y)-globin gene, where the concurrent introduction of repressive histone marks (dimethylated H3K9 and dimethylated H3K27) and removal of activating histone mark (trimethylated H3K4) is required for maintenance of gene silencing. Taken together with our previous demonstration of cross-talk between UTX and MLL2 to mediate activation of the adult β(maj)-globin gene, these data suggest a model where "active" and "repressive" cross-talk between histone-modifying enzymes coexist on the same multigene locus and play a crucial role in the precise control of developmentally regulated gene expression.

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Year:  2012        PMID: 23112189      PMCID: PMC3503177          DOI: 10.1073/pnas.1213951109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  Automethylation of G9a and its implication in wider substrate specificity and HP1 binding.

Authors:  Hang Gyeong Chin; Pierre-Olivier Estève; Mihika Pradhan; Jack Benner; Debasis Patnaik; Michael F Carey; Sriharsa Pradhan
Journal:  Nucleic Acids Res       Date:  2007-10-25       Impact factor: 16.971

2.  Analysis of epigenetic modifications of chromatin at specific gene loci by native chromatin immunoprecipitation of nucleosomes isolated using hydroxyapatite chromatography.

Authors:  Marjorie Brand; Shravanti Rampalli; Chandra-Prakash Chaturvedi; F Jeffrey Dilworth
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

3.  PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex.

Authors:  Young-Wook Cho; Teresa Hong; Sunhwa Hong; Hong Guo; Hong Yu; Doyeob Kim; Tad Guszczynski; Gregory R Dressler; Terry D Copeland; Markus Kalkum; Kai Ge
Journal:  J Biol Chem       Date:  2007-05-11       Impact factor: 5.157

4.  Mediator links epigenetic silencing of neuronal gene expression with x-linked mental retardation.

Authors:  Ning Ding; Haiying Zhou; Pierre-Olivier Esteve; Hang Gyeong Chin; Seokjoong Kim; Xuan Xu; Sumy M Joseph; Michael J Friez; Charles E Schwartz; Sriharsa Pradhan; Thomas G Boyer
Journal:  Mol Cell       Date:  2008-08-08       Impact factor: 17.970

5.  Set domain-containing protein, G9a, is a novel lysine-preferring mammalian histone methyltransferase with hyperactivity and specific selectivity to lysines 9 and 27 of histone H3.

Authors:  M Tachibana; K Sugimoto; T Fukushima; Y Shinkai
Journal:  J Biol Chem       Date:  2001-04-20       Impact factor: 5.157

6.  Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination.

Authors:  Min Gyu Lee; Raffaella Villa; Patrick Trojer; Jessica Norman; Kai-Ping Yan; Danny Reinberg; Luciano Di Croce; Ramin Shiekhattar
Journal:  Science       Date:  2007-08-30       Impact factor: 47.728

7.  Coordinated regulation of transcriptional repression by the RBP2 H3K4 demethylase and Polycomb-Repressive Complex 2.

Authors:  Diego Pasini; Klaus H Hansen; Jesper Christensen; Karl Agger; Paul A C Cloos; Kristian Helin
Journal:  Genes Dev       Date:  2008-05-15       Impact factor: 11.361

8.  The histone H3K4 demethylase SMCX links REST target genes to X-linked mental retardation.

Authors:  Mamta Tahiliani; Pinchao Mei; Rui Fang; Thiago Leonor; Michael Rutenberg; Fumiko Shimizu; Jing Li; Anjana Rao; Yujiang Shi
Journal:  Nature       Date:  2007-04-29       Impact factor: 49.962

9.  Methylation of a histone mimic within the histone methyltransferase G9a regulates protein complex assembly.

Authors:  Srihari C Sampath; Ivan Marazzi; Kyoko L Yap; Srinath C Sampath; Andrew N Krutchinsky; Ingrid Mecklenbräuker; Agnes Viale; Eugene Rudensky; Ming-Ming Zhou; Brian T Chait; Alexander Tarakhovsky
Journal:  Mol Cell       Date:  2007-08-17       Impact factor: 17.970

10.  De novo DNA methylation promoted by G9a prevents reprogramming of embryonically silenced genes.

Authors:  Silvina Epsztejn-Litman; Nirit Feldman; Monther Abu-Remaileh; Yoel Shufaro; Ariela Gerson; Jun Ueda; Rachel Deplus; François Fuks; Yoichi Shinkai; Howard Cedar; Yehudit Bergman
Journal:  Nat Struct Mol Biol       Date:  2008-10-26       Impact factor: 15.369

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  36 in total

Review 1.  Functional Crosstalk Between Lysine Methyltransferases on Histone Substrates: The Case of G9A/GLP and Polycomb Repressive Complex 2.

Authors:  Chiara Mozzetta; Julien Pontis; Slimane Ait-Si-Ali
Journal:  Antioxid Redox Signal       Date:  2014-12-19       Impact factor: 8.401

2.  AAL exacerbates pro-inflammatory response in macrophages by regulating Mincle/Syk/Card9 signaling along with the Nlrp3 inflammasome assembly.

Authors:  Zhijun Zhang; Long He; Shuang Hu; Yi Wang; Qiaohong Lai; Ping Yang; Qilin Yu; Shu Zhang; Fei Xiong; Sakine Simsekyilmaz; Qin Ning; Jinxiu Li; Dongshan Zhang; Hongliang Zhang; Xudong Xiang; Zhiguang Zhou; Hui Sun; Cong-Yi Wang
Journal:  Am J Transl Res       Date:  2015-10-15       Impact factor: 4.060

3.  EHMT1 and EHMT2 inhibition induces fetal hemoglobin expression.

Authors:  Aline Renneville; Peter Van Galen; Matthew C Canver; Marie McConkey; John M Krill-Burger; David M Dorfman; Edward B Holson; Bradley E Bernstein; Stuart H Orkin; Daniel E Bauer; Benjamin L Ebert
Journal:  Blood       Date:  2015-08-28       Impact factor: 22.113

4.  Tissue-specific splicing of a ubiquitously expressed transcription factor is essential for muscle differentiation.

Authors:  Soji Sebastian; Hervé Faralli; Zizhen Yao; Patricia Rakopoulos; Carmen Palii; Yi Cao; Kulwant Singh; Qi-Cai Liu; Alphonse Chu; Arif Aziz; Marjorie Brand; Stephen J Tapscott; F Jeffrey Dilworth
Journal:  Genes Dev       Date:  2013-05-30       Impact factor: 11.361

5.  Inhibition of G9a methyltransferase stimulates fetal hemoglobin production by facilitating LCR/γ-globin looping.

Authors:  Ivan Krivega; Colleen Byrnes; Jaira F de Vasconcellos; Y Terry Lee; Megha Kaushal; Ann Dean; Jeffery L Miller
Journal:  Blood       Date:  2015-05-15       Impact factor: 22.113

Review 6.  Regulation of CD4 T-cell differentiation and inflammation by repressive histone methylation.

Authors:  Frann Antignano; Colby Zaph
Journal:  Immunol Cell Biol       Date:  2015-01-13       Impact factor: 5.126

Review 7.  Sound of silence: the properties and functions of repressive Lys methyltransferases.

Authors:  Chiara Mozzetta; Ekaterina Boyarchuk; Julien Pontis; Slimane Ait-Si-Ali
Journal:  Nat Rev Mol Cell Biol       Date:  2015-08       Impact factor: 94.444

Review 8.  Inhibitors of Protein Methyltransferases and Demethylases.

Authors:  H Ümit Kaniskan; Michael L Martini; Jian Jin
Journal:  Chem Rev       Date:  2017-03-24       Impact factor: 60.622

Review 9.  G9a, a multipotent regulator of gene expression.

Authors:  Shilpa Rani Shankar; Avinash G Bahirvani; Vinay Kumar Rao; Narendra Bharathy; Jin Rong Ow; Reshma Taneja
Journal:  Epigenetics       Date:  2012-12-20       Impact factor: 4.528

10.  The Histone H3K4 Demethylase JMJ16 Represses Leaf Senescence in Arabidopsis.

Authors:  Peng Liu; Shuaibin Zhang; Bing Zhou; Xi Luo; Xiao Feng Zhou; Bin Cai; Yin Hua Jin; Jinxing Lin; Xiaofeng Cao; Jing Bo Jin
Journal:  Plant Cell       Date:  2019-02-01       Impact factor: 11.277

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