Literature DB >> 23108796

Introns in UTRs: why we should stop ignoring them.

Alicia A Bicknell1, Can Cenik, Hon N Chua, Frederick P Roth, Melissa J Moore.   

Abstract

Although introns in 5'- and 3'-untranslated regions (UTRs) are found in many protein coding genes, rarely are they considered distinctive entities with specific functions. Indeed, mammalian transcripts with 3'-UTR introns are often assumed nonfunctional because they are subject to elimination by nonsense-mediated decay (NMD). Nonetheless, recent findings indicate that 5'- and 3'-UTR intron status is of significant functional consequence for the regulation of mammalian genes. Therefore these features should be ignored no longer.
Copyright © 2012 WILEY Periodicals, Inc.

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Year:  2012        PMID: 23108796     DOI: 10.1002/bies.201200073

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  51 in total

1.  Genomics and phenomics of Hashimoto's thyroiditis in children and adolescents: a prospective study from Southern India.

Authors:  Bangaraiah Gari Ramesh; Panchangam Ramakanth Bhargav; Bangaraiah Gari Rajesh; Nangedda Vimala Devi; Rajagopalan Vijayaraghavan; Bhongir Aparna Varma
Journal:  Ann Transl Med       Date:  2015-11

Review 2.  Nonsense-mediated mRNA decay: The challenge of telling right from wrong in a complex transcriptome.

Authors:  Aparna Kishor; Sarah E Fritz; J Robert Hogg
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-05-26       Impact factor: 9.957

3.  Control of mRNA Stability in Fungi by NMD, EJC and CBC Factors Through 3'UTR Introns.

Authors:  Ying Zhang; Matthew S Sachs
Journal:  Genetics       Date:  2015-06-04       Impact factor: 4.562

4.  TAPAS: tool for alternative polyadenylation site analysis.

Authors:  Ashraful Arefeen; Juntao Liu; Xinshu Xiao; Tao Jiang
Journal:  Bioinformatics       Date:  2018-08-01       Impact factor: 6.937

Review 5.  Post-transcriptional regulation of gene expression in innate immunity.

Authors:  Susan Carpenter; Emiliano P Ricci; Blandine C Mercier; Melissa J Moore; Katherine A Fitzgerald
Journal:  Nat Rev Immunol       Date:  2014-06       Impact factor: 53.106

6.  A Novel Alternative Splicing Mechanism That Enhances Human 5-HT1A Receptor RNA Stability Is Altered in Major Depression.

Authors:  Brice Le François; Lei Zhang; Gouri J Mahajan; Craig A Stockmeier; Eitan Friedman; Paul R Albert
Journal:  J Neurosci       Date:  2018-08-07       Impact factor: 6.167

Review 7.  The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion.

Authors:  Guramrit Singh; Gabriel Pratt; Gene W Yeo; Melissa J Moore
Journal:  Annu Rev Biochem       Date:  2015-03-11       Impact factor: 23.643

8.  Effects of genetic variants of the bovine WNT8A gene on nine important growth traits in beef cattle.

Authors:  Yong-Zhen Huang; Yong Zou; Qing Lin; Hua He; Li Zheng; Zi-Jing Zhang; Yong-Long Dang; Chu-Zhao Lei; Xian-Yong Lan; Xing-Shan Qi; Hong Chen
Journal:  J Genet       Date:  2017-09       Impact factor: 1.166

9.  A Staufen1-mediated decay pathway influences the local transcriptome in axons.

Authors:  Ju Youn Kim; Alessia Deglincerti; Samie R Jaffrey
Journal:  Translation (Austin)       Date:  2017-12-12

10.  Variants in CIB2 cause DFNB48 and not USH1J.

Authors:  K T Booth; K Kahrizi; M Babanejad; H Daghagh; G Bademci; S Arzhangi; D Zareabdollahi; D Duman; A El-Amraoui; M Tekin; H Najmabadi; H Azaiez; R J Smith
Journal:  Clin Genet       Date:  2018-02-12       Impact factor: 4.438

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