Literature DB >> 23105068

Draft genome sequence of Pontibacter sp. nov. BAB1700, a halotolerant, industrially important bacterium.

M N Joshi1, A C Sharma, R V Pandya, R P Patel, Z M Saiyed, A K Saxena, S B Bagatharia.   

Abstract

Pontibacter sp. nov. BAB1700 is a halotolerant, Gram-negative, rod-shaped, pink-pigmented, menaquinone-7-producing bacterium isolated from sediments of a drilling well. The draft genome sequence of the strain, consisting of one chromosome of 4.5 Mb, revealed vital gene clusters involved in vitamin biosynthesis and resistance against various metals and antibiotics.

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Year:  2012        PMID： 23105068      PMCID： PMC3486390          DOI： 10.1128/JB.01550-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  17 in total

Review 1.  Role of K vitamins in the regulation of tissue calcification.

Authors:  C Vermeer; L Braam
Journal:  J Bone Miner Metab       Date:  2001       Impact factor: 2.626

2.  Effluviibacter roseus gen. nov., sp. nov., isolated from muddy water, belonging to the family "Flexibacteraceae".

Authors:  K Suresh; S Mayilraj; T Chakrabarti
Journal:  Int J Syst Evol Microbiol       Date:  2006-07       Impact factor: 2.747

3.  Pontibacter actiniarum gen. nov., sp. nov., a novel member of the phylum 'Bacteroidetes', and proposal of Reichenbachiella gen. nov. as a replacement for the illegitimate prokaryotic generic name Reichenbachia Nedashkovskaya et al. 2003.

Authors:  Olga I Nedashkovskaya; Seung Bum Kim; Makoto Suzuki; Lyudmila S Shevchenko; Myung Sook Lee; Kang Hyun Lee; Myung Soo Park; Galina M Frolova; Hyun Woo Oh; Kyung Sook Bae; Ho-Yong Park; Valery V Mikhailov
Journal:  Int J Syst Evol Microbiol       Date:  2005-11       Impact factor: 2.747

4.  Pontibacter akesuensis sp. nov., isolated from a desert soil in China.

Authors:  Yu Zhou; Xu Wang; Huan Liu; Ke-Yun Zhang; Yu-Qin Zhang; Ren Lai; Wen-Jun Li
Journal:  Int J Syst Evol Microbiol       Date:  2007-02       Impact factor: 2.747

5.  Pontibacter korlensis sp. nov., isolated from the desert of Xinjiang, China.

Authors:  Lei Zhang; Qiuju Zhang; Xuesong Luo; Yali Tang; Jun Dai; Yaowei Li; Yang Wang; Gong Chen; Chengxiang Fang
Journal:  Int J Syst Evol Microbiol       Date:  2008-05       Impact factor: 2.747

6.  Pontibacter xinjiangensis sp. nov., in the phylum 'Bacteroidetes', and reclassification of [Effluviibacter] roseus as Pontibacter roseus comb. nov.

Authors:  Yang Wang; Kundi Zhang; Feng Cai; Lei Zhang; Yali Tang; Jun Dai; Chengxiang Fang
Journal:  Int J Syst Evol Microbiol       Date:  2009-07-31       Impact factor: 2.747

7.  Pontibacter lucknowensis sp. nov., isolated from a hexachlorocyclohexane dump site.

Authors:  Vatsala Dwivedi; Neha Niharika; Rup Lal
Journal:  Int J Syst Evol Microbiol       Date:  2012-03-16       Impact factor: 2.747

8.  Studies on action of menaquinone-7 in regulation of bone metabolism and its preventive role of osteoporosis.

Authors:  Yoshinori Tsukamoto
Journal:  Biofactors       Date:  2004       Impact factor: 6.113

Review 9.  Regulatory mechanism of food factors in bone metabolism and prevention of osteoporosis.

Authors:  Masayoshi Yamaguchi
Journal:  Yakugaku Zasshi       Date:  2006-11       Impact factor: 0.302

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
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  6 in total

1.  Investigating the Microbial Degradation Potential in Oil Sands Fluid Fine Tailings Using Gamma Irradiation: A Metagenomic Perspective.

Authors:  Danielle VanMensel; Subba Rao Chaganti; Ryan Boudens; Thomas Reid; Jan Ciborowski; Christopher Weisener
Journal:  Microb Ecol       Date:  2017-03-01       Impact factor: 4.552

2.  High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India.

Authors:  Supratim Mukherjee; Alla Lapidus; Nicole Shapiro; Jan-Fang Cheng; James Han; Tbk Reddy; Marcel Huntemann; Natalia Ivanova; Natalia Mikhailova; Amy Chen; Krishna Palaniappan; Stefan Spring; Markus Göker; Victor Markowitz; Tanja Woyke; Brian J Tindall; Hans-Peter Klenk; Nikos C Kyrpides; Amrita Pati
Journal:  Stand Genomic Sci       Date:  2015-02-09

3.  Draft Genome Sequence of the Extremely Halophilic Bacterium Halomonas salina Strain CIFRI1, Isolated from the East Coast of India.

Authors:  Bijay Kumar Behera; Priyanka Das; Jitendra Maharana; Prasenjit Paria; Shambhu Nath Mandal; Dharmendra Kumar Meena; Anil Prakash Sharma; Rijith Jayarajan; Vishal Dixit; Ankit Verma; Shamsudheen Karuthedath Vellarikkal; Vinod Scaria; Sridhar Sivasubbu; Atmakuri Ramakrishna Rao; Trilochan Mohapatra
Journal:  Genome Announc       Date:  2015-01-08

4.  Pontibacter diazotrophicus sp. nov., a novel nitrogen-fixing bacterium of the family Cytophagaceae.

Authors:  Linghua Xu; Xian-Chun Zeng; Yao Nie; Xuesong Luo; Enmin Zhou; Lingli Zhou; Yunfan Pan; Wenjun Li
Journal:  PLoS One       Date:  2014-03-19       Impact factor: 3.240

5.  Functional environmental screening of a metagenomic library identifies stlA; a unique salt tolerance locus from the human gut microbiome.

Authors:  Eamonn P Culligan; Roy D Sleator; Julian R Marchesi; Colin Hill
Journal:  PLoS One       Date:  2013-12-12       Impact factor: 3.240

6.  Characterization of Pontibacter altruii, sp. nov., isolated from a human blood culture.

Authors:  M Roiko; M May; R F Relich
Journal:  New Microbes New Infect       Date:  2017-06-03
  6 in total

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