Literature DB >> 23105064

Draft genome sequence of Fusobacterium nucleatum ChDC F128, isolated from a periodontitis lesion.

Soon-Nang Park1, Si-Won Kong, Hwa-Sook Kim, Mo-Se Park, Jee-Won Lee, Eugene Cho, Yun Kyong Lim, Mi-Hwa Choi, Young-Hyo Chang, Jeong Hwan Shin, Hong-Seog Park, Sang-Haeng Choi, Joong-Ki Kook.   

Abstract

Fusobacterium nucleatum is classified into five subspecies. F. nucleatum ChDC F128 was isolated from a periodontitis lesion and proposed as a new subspecies based on the comparison of the nucleotide sequences of the RNA polymerase beta subunit and zinc protease genes. Here, we report the draft genome sequence of the strain.

Entities:  

Mesh：

Year:  2012        PMID： 23105064      PMCID： PMC3486408          DOI： 10.1128/JB.01600-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  6 in total

Review 1.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

2.  Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586.

Authors:  Vinayak Kapatral; Iain Anderson; Natalia Ivanova; Gary Reznik; Tamara Los; Athanasios Lykidis; Anamitra Bhattacharyya; Allen Bartman; Warren Gardner; Galina Grechkin; Lihua Zhu; Olga Vasieva; Lien Chu; Yakov Kogan; Oleg Chaga; Eugene Goltsman; Axel Bernal; Niels Larsen; Mark D'Souza; Theresa Walunas; Gordon Pusch; Robert Haselkorn; Michael Fonstein; Nikos Kyrpides; Ross Overbeek
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

3.  Fusobacterium nucleatum subsp. fusiforme subsp. nov. and Fusobacterium nucleatum subsp. animalis subsp. nov. as additional subspecies within Fusobacterium nucleatum.

Authors:  S E Gharbia; H N Shah
Journal:  Int J Syst Bacteriol       Date:  1992-04

4.  Proposal of three subspecies of Fusobacterium nucleatum Knorr 1922: Fusobacterium nucleatum subsp. nucleatum subsp. nov., comb. nov.; Fusobacterium nucleatum subsp. polymorphum subsp. nov., nom. rev., comb. nov.; and Fusobacterium nucleatum subsp. vincentii subsp. nov., nom. rev., comb. nov.

Authors:  J L Dzink; M T Sheenan; S S Socransky
Journal:  Int J Syst Bacteriol       Date:  1990-01

5.  Application of rpoB and zinc protease gene for use in molecular discrimination of Fusobacterium nucleatum subspecies.

Authors:  Hwa-Sook Kim; Dae-Sil Lee; Young-Hyo Chang; Min Jung Kim; Sukhoon Koh; Joongsu Kim; Jin-Hyo Seong; Soo Keun Song; Hwan Seon Shin; Jae-Beum Son; Min Young Jung; Soon-Nang Park; So Young Yoo; Ki Woon Cho; Dong-Kie Kim; Seonghoon Moon; Dooil Kim; Yongseok Choi; Byung-Ock Kim; Hyun-Seon Jang; Chun Sung Kim; Chan Kim; Son-Jin Choe; Joong-Ki Kook
Journal:  J Clin Microbiol       Date:  2009-12-02       Impact factor: 5.948

6.  Draft genome sequence of Fusobacterium nucleatum subsp. fusiforme ATCC 51190T.

Authors:  Soon-Nang Park; Si-Won Kong; Mo-Se Park; Jee-Won Lee; Eugene Cho; Yun Kyong Lim; Mi-Hwa Choi; Hwa-Sook Kim; Young-Hyo Chang; Jeong Hwan Shin; Hong-Seog Park; Sang-Haeng Choi; Joong-Ki Kook
Journal:  J Bacteriol       Date:  2012-10       Impact factor: 3.490
  6 in total
  4 in total

1.  Draft Genome Sequences of Fusobacterium nucleatum ChDC F145, ChDC F174, ChDC F206, and ChDC F300, Isolated from Human Subgingival Plaques in the Republic of Korea.

Authors:  Soon-Nang Park; Eugene Cho; Yun Kyong Lim; Hwa-Sook Kim; Dae-Soo Kim; Jaeeun Jung; Jeong-Hun Baek; Eojin Jo; Young-Hyo Chang; Jeong Hwan Shin; Sang-Haeng Choi; Jihee Kang; Yongun Choi; Hong-Seog Park; Hongik Kim; Joong-Ki Kook
Journal:  Genome Announc       Date:  2014-01-23

2.  Is a fusobacterium nucleatum infection in the colon a risk factor for colorectal cancer?: a systematic review and meta-analysis protocol.

Authors:  Amal Idrissi Janati; Igor Karp; Hisham Sabri; Elham Emami
Journal:  Syst Rev       Date:  2019-05-10

3.  Genome Sequence of Fusobacterium nucleatum Strain W1481, a Possible New Subspecies Isolated from a Periodontal Pocket.

Authors:  Mia Yang Ang; David Dymock; Joon Liang Tan; Ming Hang Thong; Qin Kai Tan; Guat Jah Wong; Ian C Paterson; Siew Woh Choo
Journal:  Genome Announc       Date:  2014-02-13

4.  Statistical approach of functional profiling for a microbial community.

Authors:  Lingling An; Nauromal Pookhao; Hongmei Jiang; Jiannong Xu
Journal:  PLoS One       Date:  2014-09-08       Impact factor: 3.240
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.