Literature DB >> 22965077

Draft genome sequence of Fusobacterium nucleatum subsp. fusiforme ATCC 51190T.

Soon-Nang Park1, Si-Won Kong, Mo-Se Park, Jee-Won Lee, Eugene Cho, Yun Kyong Lim, Mi-Hwa Choi, Hwa-Sook Kim, Young-Hyo Chang, Jeong Hwan Shin, Hong-Seog Park, Sang-Haeng Choi, Joong-Ki Kook.   

Abstract

Fusobacterium nucleatum, one of the major causative bacteria of periodontitis, is classified into five subspecies (nucleatum, polymorphum, vincentii, animalis, and fusiforme) on the basis of the several phenotypic characteristics and DNA homology. This is the first report of the draft genome sequence of F. nucleatum subsp. fusiforme ATCC 51190(T).

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Year:  2012        PMID： 22965077      PMCID： PMC3457189          DOI： 10.1128/JB.01138-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

2.  Base-calling of automated sequencer traces using phred. II. Error probabilities.

Authors:  B Ewing; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

Review 4.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

5.  Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586.

Authors:  Vinayak Kapatral; Iain Anderson; Natalia Ivanova; Gary Reznik; Tamara Los; Athanasios Lykidis; Anamitra Bhattacharyya; Allen Bartman; Warren Gardner; Galina Grechkin; Lihua Zhu; Olga Vasieva; Lien Chu; Yakov Kogan; Oleg Chaga; Eugene Goltsman; Axel Bernal; Niels Larsen; Mark D'Souza; Theresa Walunas; Gordon Pusch; Robert Haselkorn; Michael Fonstein; Nikos Kyrpides; Ross Overbeek
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

6.  Fusobacterium nucleatum subsp. fusiforme subsp. nov. and Fusobacterium nucleatum subsp. animalis subsp. nov. as additional subspecies within Fusobacterium nucleatum.

Authors:  S E Gharbia; H N Shah
Journal:  Int J Syst Bacteriol       Date:  1992-04

7.  Proposal of three subspecies of Fusobacterium nucleatum Knorr 1922: Fusobacterium nucleatum subsp. nucleatum subsp. nov., comb. nov.; Fusobacterium nucleatum subsp. polymorphum subsp. nov., nom. rev., comb. nov.; and Fusobacterium nucleatum subsp. vincentii subsp. nov., nom. rev., comb. nov.

Authors:  J L Dzink; M T Sheenan; S S Socransky
Journal:  Int J Syst Bacteriol       Date:  1990-01

8.  Genome analysis of F. nucleatum sub spp vincentii and its comparison with the genome of F. nucleatum ATCC 25586.

Authors:  Vinayak Kapatral; Natalia Ivanova; Iain Anderson; Gary Reznik; Anamitra Bhattacharyya; Warren L Gardner; Natalia Mikhailova; Alla Lapidus; Niels Larsen; Mark D'Souza; Theresa Walunas; Robert Haselkorn; Ross Overbeek; Nikos Kyrpides
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043

9.  Genome sequence of Fusobacterium nucleatum subspecies polymorphum - a genetically tractable fusobacterium.

Authors:  Sandor E Karpathy; Xiang Qin; Jason Gioia; Huaiyang Jiang; Yamei Liu; Joseph F Petrosino; Shailaja Yerrapragada; George E Fox; Susan Kinder Haake; George M Weinstock; Sarah K Highlander
Journal:  PLoS One       Date:  2007-08-01       Impact factor: 3.240
  9 in total
  3 in total

1.  Draft genome sequence of Fusobacterium nucleatum ChDC F128, isolated from a periodontitis lesion.

Authors:  Soon-Nang Park; Si-Won Kong; Hwa-Sook Kim; Mo-Se Park; Jee-Won Lee; Eugene Cho; Yun Kyong Lim; Mi-Hwa Choi; Young-Hyo Chang; Jeong Hwan Shin; Hong-Seog Park; Sang-Haeng Choi; Joong-Ki Kook
Journal:  J Bacteriol       Date:  2012-11       Impact factor: 3.490

2.  Is a fusobacterium nucleatum infection in the colon a risk factor for colorectal cancer?: a systematic review and meta-analysis protocol.

Authors:  Amal Idrissi Janati; Igor Karp; Hisham Sabri; Elham Emami
Journal:  Syst Rev       Date:  2019-05-10

3.  Genome Sequence of Fusobacterium nucleatum Strain W1481, a Possible New Subspecies Isolated from a Periodontal Pocket.

Authors:  Mia Yang Ang; David Dymock; Joon Liang Tan; Ming Hang Thong; Qin Kai Tan; Guat Jah Wong; Ian C Paterson; Siew Woh Choo
Journal:  Genome Announc       Date:  2014-02-13
  3 in total

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