Literature DB >> 23104406

Gut and root microbiota commonalities.

Shamayim T Ramírez-Puebla1, Luis E Servín-Garcidueñas, Berenice Jiménez-Marín, Luis M Bolaños, Mónica Rosenblueth, Julio Martínez, Marco Antonio Rogel, Ernesto Ormeño-Orrillo, Esperanza Martínez-Romero.   

Abstract

Animal guts and plant roots have absorption roles for nutrient uptake and converge in harboring large, complex, and dynamic groups of microbes that participate in degradation or modification of nutrients and other substances. Gut and root bacteria regulate host gene expression, provide metabolic capabilities, essential nutrients, and protection against pathogens, and seem to share evolutionary trends.

Mesh：

Year:  2012        PMID： 23104406      PMCID： PMC3536091          DOI： 10.1128/AEM.02553-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  146 in total

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Journal:  Appl Environ Microbiol       Date:  2011-11-11       Impact factor: 4.792

Review 2.  The interaction between bacteria and bile.

Authors:  Máire Begley; Cormac G M Gahan; Colin Hill
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Journal:  Nat Rev Microbiol       Date:  2008-10       Impact factor: 60.633

4.  Bacterial-modulated host immunity and stem cell activation for gut homeostasis.

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Journal:  Genes Dev       Date:  2009-10-01       Impact factor: 11.361

5.  Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi.

Authors:  Tanja R Scheublin; Ian R Sanders; Christoph Keel; Jan Roelof van der Meer
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6.  Characterization of the first alginolytic operons in a marine bacterium: from their emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and human gut Bacteroides.

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Journal:  Environ Microbiol       Date:  2012-04-19       Impact factor: 5.491

7.  Comparative genomics of the vitamin B12 metabolism and regulation in prokaryotes.

Authors:  Dmitry A Rodionov; Alexey G Vitreschak; Andrey A Mironov; Mikhail S Gelfand
Journal:  J Biol Chem       Date:  2003-07-17       Impact factor: 5.157

8.  The Termite Gut Microflora as an Oxygen Sink: Microelectrode Determination of Oxygen and pH Gradients in Guts of Lower and Higher Termites.

Authors:  A Brune; D Emerson; J A Breznak
Journal:  Appl Environ Microbiol       Date:  1995-07       Impact factor: 4.792

9.  Innate immune homeostasis by the homeobox gene caudal and commensal-gut mutualism in Drosophila.

Authors:  Ji-Hwan Ryu; Sung-Hee Kim; Hyo-Young Lee; Jin Young Bai; Young-Do Nam; Jin-Woo Bae; Dong Gun Lee; Seung Chul Shin; Eun-Mi Ha; Won-Jae Lee
Journal:  Science       Date:  2008-01-24       Impact factor: 47.728

10.  Defining the core Arabidopsis thaliana root microbiome.

Authors:  Derek S Lundberg; Sarah L Lebeis; Sur Herrera Paredes; Scott Yourstone; Jase Gehring; Stephanie Malfatti; Julien Tremblay; Anna Engelbrektson; Victor Kunin; Tijana Glavina Del Rio; Robert C Edgar; Thilo Eickhorst; Ruth E Ley; Philip Hugenholtz; Susannah Green Tringe; Jeffery L Dangl
Journal:  Nature       Date:  2012-08-02       Impact factor: 49.962
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  26 in total

1.  Cross-kingdom similarities in microbiome functions.

Authors:  Rodrigo Mendes; Jos M Raaijmakers
Journal:  ISME J       Date:  2015-02-03       Impact factor: 10.302

Review 2.  Community metabolic modeling approaches to understanding the gut microbiome: Bridging biochemistry and ecology.

Authors:  Helena Mendes-Soares; Nicholas Chia
Journal:  Free Radic Biol Med       Date:  2016-12-15       Impact factor: 7.376

Review 3.  Polyphenols and the human brain: plant “secondary metabolite” ecologic roles and endogenous signaling functions drive benefits.

Authors:  David O Kennedy
Journal:  Adv Nutr       Date:  2014-09       Impact factor: 8.701

Review 4.  Brachypodium: A Monocot Grass Model Genus for Plant Biology.

Authors:  Karen-Beth G Scholthof; Sonia Irigoyen; Pilar Catalan; Kranthi K Mandadi
Journal:  Plant Cell       Date:  2018-07-11       Impact factor: 11.277

Review 5.  The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes.

Authors:  Pablo R Hardoim; Leonard S van Overbeek; Gabriele Berg; Anna Maria Pirttilä; Stéphane Compant; Andrea Campisano; Matthias Döring; Angela Sessitsch
Journal:  Microbiol Mol Biol Rev       Date:  2015-09       Impact factor: 11.056

Review 6.  Natural environments, ancestral diets, and microbial ecology: is there a modern "paleo-deficit disorder"? Part II.

Authors:  Alan C Logan; Martin A Katzman; Vicent Balanzá-Martínez
Journal:  J Physiol Anthropol       Date:  2015-03-10       Impact factor: 2.867

7.  Biotic stress shifted structure and abundance of Enterobacteriaceae in the lettuce microbiome.

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Journal:  PLoS One       Date:  2015-02-25       Impact factor: 3.240

8.  Buffet hypothesis for microbial nutrition at the rhizosphere.

Authors:  Martha G López-Guerrero; Ernesto Ormeño-Orrillo; Mónica Rosenblueth; Julio Martinez-Romero; Esperanza Martïnez-Romero
Journal:  Front Plant Sci       Date:  2013-06-14       Impact factor: 5.753

9.  Role of soil in the regulation of human and plant pathogens: soils' contributions to people.

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10.  Beneficial effects of plant-associated microbes on indoor microbiomes and human health?

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Journal:  Front Microbiol       Date:  2014-01-29       Impact factor: 5.640
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