Literature DB >> 23102813

LIN28A is a suppressor of ER-associated translation in embryonic stem cells.

Jun Cho1, Hyeshik Chang1, S Chul Kwon1, Baekgyu Kim1, Yoosik Kim1, Junho Choe2, Minju Ha1, Yoon Ki Kim2, V Narry Kim3.   

Abstract

LIN28 plays a critical role in developmental transition, glucose metabolism, and tumorigenesis. At the molecular level, LIN28 is known to repress maturation of let-7 microRNAs and enhance translation of certain mRNAs. In this study, we obtain a genome-wide view of the molecular function of LIN28A in mouse embryonic stem cells by carrying out RNA crosslinking-immunoprecipitation-sequencing (CLIP-seq) and ribosome footprinting. We find that, in addition to let-7 precursors, LIN28A binds to a large number of spliced mRNAs. LIN28A recognizes AAGNNG, AAGNG, and less frequently UGUG, which are located in the terminal loop of a small hairpin. LIN28A is localized to the periendoplasmic reticulum (ER) area and inhibits translation of mRNAs that are destined for the ER, reducing the synthesis of transmembrane proteins, ER or Golgi lumen proteins, and secretory proteins. Our study suggests a selective regulatory mechanism for ER-associated translation and reveals an unexpected role of LIN28A as a global suppressor of genes in the secretory pathway.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23102813     DOI: 10.1016/j.cell.2012.10.019

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  119 in total

1.  An RNA-binding Protein, Lin28, Recognizes and Remodels G-quartets in the MicroRNAs (miRNAs) and mRNAs It Regulates.

Authors:  Elizabeth O'Day; Minh T N Le; Shunsuke Imai; Shen Mynn Tan; Rory Kirchner; Haribabu Arthanari; Oliver Hofmann; Gerhard Wagner; Judy Lieberman
Journal:  J Biol Chem       Date:  2015-06-04       Impact factor: 5.157

Review 2.  A census of human RNA-binding proteins.

Authors:  Stefanie Gerstberger; Markus Hafner; Thomas Tuschl
Journal:  Nat Rev Genet       Date:  2014-11-04       Impact factor: 53.242

3.  Role and Regulation of Lin28 in Progenitor Cells During Central Nervous System Development.

Authors:  Fernando Faunes
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

4.  SSMART: sequence-structure motif identification for RNA-binding proteins.

Authors:  Alina Munteanu; Neelanjan Mukherjee; Uwe Ohler
Journal:  Bioinformatics       Date:  2018-12-01       Impact factor: 6.937

Review 5.  The role of 3' end uridylation in RNA metabolism and cellular physiology.

Authors:  Dagmar Zigáčková; Štěpánka Vaňáčová
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

6.  Lin-28 promotes symmetric stem cell division and drives adaptive growth in the adult Drosophila intestine.

Authors:  Ching-Huan Chen; Arthur Luhur; Nicholas Sokol
Journal:  Development       Date:  2015-10-15       Impact factor: 6.868

7.  A LIN28B-RAN-AURKA Signaling Network Promotes Neuroblastoma Tumorigenesis.

Authors:  Robert W Schnepp; Priya Khurana; Edward F Attiyeh; Pichai Raman; Sara E Chodosh; Derek A Oldridge; Maria E Gagliardi; Karina L Conkrite; Shahab Asgharzadeh; Robert C Seeger; Blair B Madison; Anil K Rustgi; John M Maris; Sharon J Diskin
Journal:  Cancer Cell       Date:  2015-10-17       Impact factor: 31.743

Review 8.  RNA-binding proteins in neurodegeneration: Seq and you shall receive.

Authors:  Julia K Nussbacher; Ranjan Batra; Clotilde Lagier-Tourenne; Gene W Yeo
Journal:  Trends Neurosci       Date:  2015-03-09       Impact factor: 13.837

9.  Lin28 enhances de novo fatty acid synthesis to promote cancer progression via SREBP-1.

Authors:  Yang Zhang; Chenchen Li; Chuanzhen Hu; Qian Wu; Yongping Cai; Songge Xing; Hui Lu; Lin Wang; Linchong Sun; Tingting Li; Xiaoping He; Xiuying Zhong; Junfeng Wang; Ping Gao; Zachary J Smith; Weidong Jia; Huafeng Zhang
Journal:  EMBO Rep       Date:  2019-08-05       Impact factor: 8.807

10.  Identification of mRNAs bound and regulated by human LIN28 proteins and molecular requirements for RNA recognition.

Authors:  Markus Hafner; Klaas E A Max; Pradeep Bandaru; Pavel Morozov; Stefanie Gerstberger; Miguel Brown; Henrik Molina; Thomas Tuschl
Journal:  RNA       Date:  2013-03-12       Impact factor: 4.942

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