Literature DB >> 23102584

Can we deconstruct cancer, one patient at a time?

C Anthony Blau1, Effie Liakopoulou.   

Abstract

Patients with cancer face an ever-widening gap between the exponential rate at which technology improves and the linear rate at which these advances are translated into clinical practice. Closing this gap will require the establishment of learning loops that intimately link lab and clinic and enable the immediate transfer of knowledge, thereby engaging highly motivated patients with cancer as true partners in research. Here, we discuss the goal of creating a distributed network that aims to place world-class resources at the disposal of select patients with cancer and their oncologists, and then use these intensively monitored individual patient experiences to improve collective understanding of how cancer works. Published by Elsevier Ltd.

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Year:  2012        PMID: 23102584      PMCID: PMC4221262          DOI: 10.1016/j.tig.2012.09.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  25 in total

1.  Effects of ischemia on gene expression.

Authors:  J Huang; R Qi; J Quackenbush; E Dauway; E Lazaridis; T Yeatman
Journal:  J Surg Res       Date:  2001-08       Impact factor: 2.192

Review 2.  Parachute use to prevent death and major trauma related to gravitational challenge: systematic review of randomised controlled trials.

Authors:  Gordon C S Smith; Jill P Pell
Journal:  BMJ       Date:  2003-12-20

Review 3.  Diseases as network perturbations.

Authors:  Antonio del Sol; Rudi Balling; Lee Hood; David Galas
Journal:  Curr Opin Biotechnol       Date:  2010-08-13       Impact factor: 9.740

4.  Duke scandal highlights need for genomics research criteria.

Authors:  Merrill Goozner
Journal:  J Natl Cancer Inst       Date:  2011-06-22       Impact factor: 13.506

5.  Bortezomib induction and maintenance treatment in patients with newly diagnosed multiple myeloma: results of the randomized phase III HOVON-65/ GMMG-HD4 trial.

Authors:  Pieter Sonneveld; Ingo G H Schmidt-Wolf; Bronno van der Holt; Laila El Jarari; Uta Bertsch; Hans Salwender; Sonja Zweegman; Edo Vellenga; Annemiek Broyl; Igor W Blau; Katja C Weisel; Shulamiet Wittebol; Gerard M J Bos; Marian Stevens-Kroef; Christof Scheid; Michael Pfreundschuh; Dirk Hose; Anna Jauch; Helgi van der Velde; Reinier Raymakers; Martijn R Schaafsma; Marie-Jose Kersten; Marinus van Marwijk-Kooy; Ulrich Duehrsen; Walter Lindemann; Pierre W Wijermans; Henk M Lokhorst; Hartmut M Goldschmidt
Journal:  J Clin Oncol       Date:  2012-07-16       Impact factor: 44.544

6.  The origin and evolution of mutations in acute myeloid leukemia.

Authors:  John S Welch; Timothy J Ley; Daniel C Link; Christopher A Miller; David E Larson; Daniel C Koboldt; Lukas D Wartman; Tamara L Lamprecht; Fulu Liu; Jun Xia; Cyriac Kandoth; Robert S Fulton; Michael D McLellan; David J Dooling; John W Wallis; Ken Chen; Christopher C Harris; Heather K Schmidt; Joelle M Kalicki-Veizer; Charles Lu; Qunyuan Zhang; Ling Lin; Michelle D O'Laughlin; Joshua F McMichael; Kim D Delehaunty; Lucinda A Fulton; Vincent J Magrini; Sean D McGrath; Ryan T Demeter; Tammi L Vickery; Jasreet Hundal; Lisa L Cook; Gary W Swift; Jerry P Reed; Patricia A Alldredge; Todd N Wylie; Jason R Walker; Mark A Watson; Sharon E Heath; William D Shannon; Nobish Varghese; Rakesh Nagarajan; Jacqueline E Payton; Jack D Baty; Shashikant Kulkarni; Jeffery M Klco; Michael H Tomasson; Peter Westervelt; Matthew J Walter; Timothy A Graubert; John F DiPersio; Li Ding; Elaine R Mardis; Richard K Wilson
Journal:  Cell       Date:  2012-07-20       Impact factor: 41.582

Review 7.  Tackling the widespread and critical impact of batch effects in high-throughput data.

Authors:  Jeffrey T Leek; Robert B Scharpf; Héctor Corrada Bravo; David Simcha; Benjamin Langmead; W Evan Johnson; Donald Geman; Keith Baggerly; Rafael A Irizarry
Journal:  Nat Rev Genet       Date:  2010-09-14       Impact factor: 53.242

Review 8.  In silico models of cancer.

Authors:  Lucas B Edelman; James A Eddy; Nathan D Price
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2010 Jul-Aug

9.  Physician-related factors involved in patient decisions to enroll onto cancer clinical trials.

Authors:  Robert L Comis; Jon D Miller; Diane D Colaizzi; Linda G Kimmel
Journal:  J Oncol Pract       Date:  2009-03       Impact factor: 3.840

10.  Cancer genome sequencing--an interim analysis.

Authors:  Edward J Fox; Jesse J Salk; Lawrence A Loeb
Journal:  Cancer Res       Date:  2009-06-09       Impact factor: 12.701

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  10 in total

Review 1.  Genomics pipelines and data integration: challenges and opportunities in the research setting.

Authors:  Jeremy Davis-Turak; Sean M Courtney; E Starr Hazard; W Bailey Glen; Willian A da Silveira; Timothy Wesselman; Larry P Harbin; Bethany J Wolf; Dongjun Chung; Gary Hardiman
Journal:  Expert Rev Mol Diagn       Date:  2017-01-25       Impact factor: 5.225

Review 2.  Rapid learning for precision oncology.

Authors:  Jeff Shrager; Jay M Tenenbaum
Journal:  Nat Rev Clin Oncol       Date:  2014-01-21       Impact factor: 66.675

3.  Personalized characterization of diseases using sample-specific networks.

Authors:  Xiaoping Liu; Yuetong Wang; Hongbin Ji; Kazuyuki Aihara; Luonan Chen
Journal:  Nucleic Acids Res       Date:  2016-09-04       Impact factor: 16.971

4.  Personalizing Precision Oncology Clinical Trials in Latin America: An Expert Panel on Challenges and Opportunities.

Authors:  Roberto Jun Arai; Rodrigo Santa Cruz Guindalini; Andrea Sabina Llera; Juan Manoel O'Connor; Bettina Muller; Mauricio Lema; Helano C Freitas; Tannia Soria; Lucía Delgado; Denis Landaverde; Paola Montenegro; Rachel P Riechelmann
Journal:  Oncologist       Date:  2019-03-25

5.  Identifying network biomarkers of cancer by sample-specific differential network.

Authors:  Yu Zhang; Xiao Chang; Jie Xia; Yanhong Huang; Shaoyan Sun; Luonan Chen; Xiaoping Liu
Journal:  BMC Bioinformatics       Date:  2022-06-15       Impact factor: 3.307

6.  Participant Attitudes Toward an Intensive Trial of Multiple Biopsies, Multidimensional Molecular Analysis, and Reporting of Results in Metastatic Triple-Negative Breast Cancer.

Authors:  Nicole M Kuderer; Kimberly A Burton; Sibel Blau; Francis Senecal; Vijayakrishna K Gadi; Stephanie Parker; Elisabeth Mahen; David Veenstra; Josh J Carlson; Gary H Lyman; C Anthony Blau
Journal:  JCO Precis Oncol       Date:  2017-08-16

7.  A Distributed Network for Intensive Longitudinal Monitoring in Metastatic Triple-Negative Breast Cancer.

Authors:  C Anthony Blau; Arturo B Ramirez; Sibel Blau; Colin C Pritchard; Michael O Dorschner; Stephen C Schmechel; Timothy J Martins; Elisabeth M Mahen; Kimberly A Burton; Vitalina M Komashko; Amie J Radenbaugh; Katy Dougherty; Anju Thomas; Christopher P Miller; James Annis; Jonathan R Fromm; Chaozhong Song; Elizabeth Chang; Kellie Howard; Sharon Austin; Rodney A Schmidt; Michael L Linenberger; Pamela S Becker; Francis M Senecal; Brigham H Mecham; Su-In Lee; Anup Madan; Roy Ronen; Janusz Dutkowski; Shelly Heimfeld; Brent L Wood; Jackie L Stilwell; Eric P Kaldjian; David Haussler; Jingchun Zhu
Journal:  J Natl Compr Canc Netw       Date:  2016-01       Impact factor: 11.908

8.  Safety, Feasibility, and Merits of Longitudinal Molecular Testing of Multiple Metastatic Sites to Inform mTNBC Patient Treatment in the Intensive Trial of Omics in Cancer.

Authors:  Kimberly A Burton; Elisabeth Mahen; Eric Quentin Konnick; Sibel Blau; Michael O Dorschner; Arturo B Ramirez; Stephen C Schmechel; Chaozhong Song; Rahul Parulkar; Stephanie Parker; Francis Mark Senecal; Colin C Pritchard; Brigham H Mecham; Christopher Szeto; Patricia Spilman; Jingchun Zhu; Vijayakrishna K Gadi; Roy Ronen; Jackie Stilwell; Eric Kaldjian; Janusz Dutkowski; Stephen Charles Benz; Shahrooz Rabizadeh; Patrick Soon-Shiong; C Anthony Blau
Journal:  JCO Precis Oncol       Date:  2022-03

Review 9.  Precision Medicine and Non-Colorectal Cancer Liver Metastases: Fiction or Reality?

Authors:  Effie Liakopoulou; Alexander Knuth
Journal:  Viszeralmedizin       Date:  2015-12-04

Review 10.  Making Sense of Genetic Information: The Promising Evolution of Clinical Stratification and Precision Oncology Using Machine Learning.

Authors:  Mahaly Baptiste; Sarah Shireen Moinuddeen; Courtney Lace Soliz; Hashimul Ehsan; Gen Kaneko
Journal:  Genes (Basel)       Date:  2021-05-12       Impact factor: 4.096

  10 in total

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