Literature DB >> 23100763

An evidence of laccases in archaea.

Krishna Kant Sharma1, Ramesh Chander Kuhad.   

Abstract

Laccases (benzenediol:oxygen oxidoreductase, EC 1.10.3.2) are a diverse group of multicopper oxidases that catalyze the oxidation of a variety of aromatic compounds. Here we present evidence for distribution of laccases among archaea and their probable functions. Putative laccase genes have been found in different archaeal groups that might have branched off early during evolution, e.g. Haloarcula marismortui ATCC 43049, Natronomonas pharaonis DSM2160, Pyrobaculum aerophilum IM2, Candidatus Nitrosopumilus maritimus SCM1, Halorubrum lacusprofundi ATCC 49239. Most of the archaeal multicopper oxidases reported here are of Type 1 and Type 2 whereas type 3 copper-binding domain could be found in Pyrobaculum aerophilum IM2 and Halorubrum lacusprofundi ATCC49239. An analysis of the genome sequence database revealed the presence of novel types of two-domain laccases in archaea. ed using this method. CyMVin the positive samples of Phalaenopsis sp. and Arachnis sp. was confirmed by DNA sequencing and cp gene homeology blast. The results showed that CyMV extracted from the leaves of orchid in Hangzhou, Zhejiang Province, China, could be derived from Kunming city (KM), Yunnan Province, China. This method characterized by high sensitivity, specificity, and precision is suitable for early diagnosis and quantitative detection of CyMV.

Entities:  

Keywords:  Archaea; Cluster of orthologus groups; Genome; Laccase; Multicopper oxidase

Year:  2009        PMID: 23100763      PMCID: PMC3450137          DOI: 10.1007/s12088-009-0039-4

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  10 in total

1.  Laccases are widespread in bacteria.

Authors:  G Alexandre; I B Zhulin
Journal:  Trends Biotechnol       Date:  2000-02       Impact factor: 19.536

2.  Multicopper Oxidases and Oxygenases.

Authors:  Edward I. Solomon; Uma M. Sundaram; Timothy E. Machonkin
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

3.  Novel types of two-domain multi-copper oxidases: possible missing links in the evolution.

Authors:  Kensuke Nakamura; Takeshi Kawabata; Kei Yura; Nobuhiro Go
Journal:  FEBS Lett       Date:  2003-10-23       Impact factor: 4.124

4.  Prediction of novel archaeal enzymes from sequence-derived features.

Authors:  Lars Juhl Jensen; Marie Skovgaard; Søren Brunak
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

Review 5.  Laccase: new functions for an old enzyme.

Authors:  Alfred M Mayer; Richard C Staples
Journal:  Phytochemistry       Date:  2002-07       Impact factor: 4.072

6.  [Laccase and tyrosinase activities in lichens].

Authors:  A G Zavarzina; A A Zavarzin
Journal:  Mikrobiologiia       Date:  2006 Sep-Oct

7.  Laccase: enzyme revisited and function redefined.

Authors:  Krishna Kant Sharma; Ramesh Chander Kuhad
Journal:  Indian J Microbiol       Date:  2008-06-18       Impact factor: 2.461

8.  Aromatic ring cleavage of 4,6-di(tert-butyl)guaiacol, a phenolic lignin model compound, by laccase of Coriolus versicolor.

Authors:  S Kawai; T Umezawa; M Shimada; T Higuchi
Journal:  FEBS Lett       Date:  1988-08-29       Impact factor: 4.124

9.  Towards understanding the first genome sequence of a crenarchaeon by genome annotation using clusters of orthologous groups of proteins (COGs).

Authors:  D A Natale; U T Shankavaram; M Y Galperin; Y I Wolf; L Aravind; E V Koonin
Journal:  Genome Biol       Date:  2000-11-06       Impact factor: 13.583

10.  The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions.

Authors:  Victor M Markowitz; Ernest Szeto; Krishna Palaniappan; Yuri Grechkin; Ken Chu; I-Min A Chen; Inna Dubchak; Iain Anderson; Athanasios Lykidis; Konstantinos Mavromatis; Natalia N Ivanova; Nikos C Kyrpides
Journal:  Nucleic Acids Res       Date:  2007-10-12       Impact factor: 16.971

  10 in total
  4 in total

Review 1.  Copper active sites in biology.

Authors:  Edward I Solomon; David E Heppner; Esther M Johnston; Jake W Ginsbach; Jordi Cirera; Munzarin Qayyum; Matthew T Kieber-Emmons; Christian H Kjaergaard; Ryan G Hadt; Li Tian
Journal:  Chem Rev       Date:  2014-03-03       Impact factor: 60.622

Review 2.  Laccase Properties, Physiological Functions, and Evolution.

Authors:  Grzegorz Janusz; Anna Pawlik; Urszula Świderska-Burek; Jolanta Polak; Justyna Sulej; Anna Jarosz-Wilkołazka; Andrzej Paszczyński
Journal:  Int J Mol Sci       Date:  2020-01-31       Impact factor: 5.923

3.  Comparative Genomics Platform and Phylogenetic Analysis of Fungal Laccases and Multi-Copper Oxidases.

Authors:  Jiayao Wu; Jaeyoung Choi; Fred O Asiegbu; Yong-Hwan Lee
Journal:  Mycobiology       Date:  2020-09-11       Impact factor: 1.858

4.  Tyrosinase and laccase-producing Bacillus aryabhattai TFG5 and its role in the polymerization of phenols.

Authors:  Iniyakumar Muniraj; Syed Shameer; Sivakumar Uthandi
Journal:  BMC Microbiol       Date:  2021-06-22       Impact factor: 3.605

  4 in total

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