Literature DB >> 23097742

Insights to the evolution of Nucleobase-Ascorbate Transporters (NAT/NCS2 family) from the Cys-scanning analysis of xanthine permease XanQ.

Stathis Frillingos1.   

Abstract

The nucleobase-ascorbate transporter or nucleobase-cation symporter-2 (NAT/NCS2) family is one of the five known families of transporters that use nucleobases as their principal substrates and the only one that is evolutionarily conserved and widespread in all major taxa of organisms. The family is a typical paradigm of a group of related transporters for which conservation in sequence and overall structure correlates with high functional variations between homologs. Strikingly, the human homologs fail to recognize nucleobases or related cytotoxic compounds. This fact allows important biomedical perspectives for translation of structure-function knowledge on this family to the rational design of targeted antimicrobial purine-related drugs. To date, very few homologs have been characterized experimentally in detail and only two, the xanthine permease XanQ and the uric acid/xanthine permease UapA, have been studied extensively with site-directed mutagenesis. Recently, the high-resolution structure of a related homolog, the uracil permease UraA, has been solved for the first time with crystallography. In this review, I summarize current knowledge and emphasize how the systematic Cys-scanning mutagenesis of XanQ, in conjunction with existing biochemical and genetic evidence for UapA and the x-ray structure of UraA, allow insight on the structure-function and evolutionary relationships of this important group of transporters. The review is organized in three parts referring to (I) the theory of use of Cys-scanning approaches in the study of membrane transporter families, (II) the state of the art with experimental knowledge and current research on the NAT/NCS2 family, (III) the perspectives derived from the Cys-scanning analysis of XanQ.

Entities:  

Keywords:  Cys-scanning analysis; Nucleobase uptake; binding site; evolution; specificity; xanthine permease

Year:  2012        PMID: 23097742      PMCID: PMC3476789     

Source DB:  PubMed          Journal:  Int J Biochem Mol Biol        ISSN: 2152-4114


  88 in total

1.  Transmembrane segment 11 appears to line the purine permeation pathway of the Plasmodium falciparum equilibrative nucleoside transporter 1 (PfENT1).

Authors:  Paul M Riegelhaupt; I J Frame; Myles H Akabas
Journal:  J Biol Chem       Date:  2010-03-24       Impact factor: 5.157

2.  Dynamic elements at both cytoplasmically and extracellularly facing sides of the UapA transporter selectively control the accessibility of substrates to their translocation pathway.

Authors:  Vasiliki Kosti; Ioannis Papageorgiou; George Diallinas
Journal:  J Mol Biol       Date:  2010-02-25       Impact factor: 5.469

Review 3.  Structural perspectives on secondary active transporters.

Authors:  Olga Boudker; Grégory Verdon
Journal:  Trends Pharmacol Sci       Date:  2010-07-23       Impact factor: 14.819

4.  Site-directed alkylation studies with LacY provide evidence for the alternating access model of transport.

Authors:  Xiaoxu Jiang; Yiling Nie; H Ronald Kaback
Journal:  Biochemistry       Date:  2011-02-08       Impact factor: 3.162

5.  Histidine residues in the Na+-coupled ascorbic acid transporter-2 (SVCT2) are central regulators of SVCT2 function, modulating pH sensitivity, transporter kinetics, Na+ cooperativity, conformational stability, and subcellular localization.

Authors:  Valeska Ormazabal; Felipe A Zuñiga; Elizabeth Escobar; Carlos Aylwin; Alexis Salas-Burgos; Alejandro Godoy; Alejandro M Reyes; Juan Carlos Vera; Coralia I Rivas
Journal:  J Biol Chem       Date:  2010-09-14       Impact factor: 5.157

6.  Purine substrate recognition by the nucleobase-ascorbate transporter signature motif in the YgfO xanthine permease: ASN-325 binds and ALA-323 senses substrate.

Authors:  Ekaterini Georgopoulou; George Mermelekas; Ekaterini Karena; Stathis Frillingos
Journal:  J Biol Chem       Date:  2010-04-20       Impact factor: 5.157

7.  Expression and purification of a functional uric acid-xanthine transporter (UapA).

Authors:  James Leung; Mayia Karachaliou; Claudia Alves; George Diallinas; Bernadette Byrne
Journal:  Protein Expr Purif       Date:  2010-02-11       Impact factor: 1.650

8.  Cysteine-scanning analysis of helices TM8, TM9a, and TM9b and intervening loops in the YgfO xanthine permease: a carboxyl group is essential at ASP-276.

Authors:  George Mermelekas; Ekaterini Georgopoulou; Alexander Kallis; Maria Botou; Vassilios Vlantos; Stathis Frillingos
Journal:  J Biol Chem       Date:  2010-08-29       Impact factor: 5.157

Review 9.  Nucleoside transport and associated metabolism.

Authors:  T Möhlmann; C Bernard; S Hach; H Ekkehard Neuhaus
Journal:  Plant Biol (Stuttg)       Date:  2010-09       Impact factor: 3.081

10.  Molecular basis of alternating access membrane transport by the sodium-hydantoin transporter Mhp1.

Authors:  Tatsuro Shimamura; Simone Weyand; Oliver Beckstein; Nicholas G Rutherford; Jonathan M Hadden; David Sharples; Mark S P Sansom; So Iwata; Peter J F Henderson; Alexander D Cameron
Journal:  Science       Date:  2010-04-23       Impact factor: 47.728

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  11 in total

Review 1.  Recent developments in nucleobase cation symporter-1 (NCS1) family transport proteins from bacteria, archaea, fungi and plants.

Authors:  Simon G Patching
Journal:  J Biosci       Date:  2018-09       Impact factor: 1.826

2.  Functional identification of the hypoxanthine/guanine transporters YjcD and YgfQ and the adenine transporters PurP and YicO of Escherichia coli K-12.

Authors:  Konstantinos Papakostas; Maria Botou; Stathis Frillingos
Journal:  J Biol Chem       Date:  2013-11-08       Impact factor: 5.157

3.  Molecular dynamics simulations of the bacterial UraA H+-uracil symporter in lipid bilayers reveal a closed state and a selective interaction with cardiolipin.

Authors:  Antreas C Kalli; Mark S P Sansom; Reinhart A F Reithmeier
Journal:  PLoS Comput Biol       Date:  2015-03-02       Impact factor: 4.475

4.  Sul1 and Sul2 sulfate transceptors signal to protein kinase A upon exit of sulfur starvation.

Authors:  Harish Nag Kankipati; Marta Rubio-Texeira; Dries Castermans; George Diallinas; Johan M Thevelein
Journal:  J Biol Chem       Date:  2015-02-27       Impact factor: 5.157

Review 5.  Nucleobase and nucleoside transport and integration into plant metabolism.

Authors:  Christopher Girke; Manuel Daumann; Sandra Niopek-Witz; Torsten Möhlmann
Journal:  Front Plant Sci       Date:  2014-09-09       Impact factor: 5.753

6.  Evolution of substrate specificity in the Nucleobase-Ascorbate Transporter (NAT) protein family.

Authors:  Anezia Kourkoulou; Alexandros A Pittis; George Diallinas
Journal:  Microb Cell       Date:  2018-03-22

Review 7.  Tales of tails in transporters.

Authors:  Emmanuel Mikros; George Diallinas
Journal:  Open Biol       Date:  2019-06-19       Impact factor: 6.411

8.  NAT/NCS2-hound: a webserver for the detection and evolutionary classification of prokaryotic and eukaryotic nucleobase-cation symporters of the NAT/NCS2 family.

Authors:  A Chaliotis; P Vlastaridis; C Ntountoumi; M Botou; V Yalelis; P Lazou; E Tatsaki; D Mossialos; S Frillingos; G D Amoutzias
Journal:  Gigascience       Date:  2018-12-01       Impact factor: 6.524

Review 9.  Understanding transporter specificity and the discrete appearance of channel-like gating domains in transporters.

Authors:  George Diallinas
Journal:  Front Pharmacol       Date:  2014-09-12       Impact factor: 5.810

10.  Comparative Genomics, Whole-Genome Re-sequencing and Expression Profile Analysis of Nucleobase:Cation Symporter 2 (NCS2) Genes in Maize.

Authors:  Wenbo Chai; Xiaojian Peng; Bin Liu; Jing Wang; Zhan Zhu; Yin Liu; Kai Zhao; Beijiu Cheng; Weina Si; Haiyang Jiang
Journal:  Front Plant Sci       Date:  2018-06-28       Impact factor: 5.753

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