Literature DB >> 20413494

Molecular basis of alternating access membrane transport by the sodium-hydantoin transporter Mhp1.

Tatsuro Shimamura1, Simone Weyand, Oliver Beckstein, Nicholas G Rutherford, Jonathan M Hadden, David Sharples, Mark S P Sansom, So Iwata, Peter J F Henderson, Alexander D Cameron.   

Abstract

The structure of the sodium-benzylhydantoin transport protein Mhp1 from Microbacterium liquefaciens comprises a five-helix inverted repeat, which is widespread among secondary transporters. Here, we report the crystal structure of an inward-facing conformation of Mhp1 at 3.8 angstroms resolution, complementing its previously described structures in outward-facing and occluded states. From analyses of the three structures and molecular dynamics simulations, we propose a mechanism for the transport cycle in Mhp1. Switching from the outward- to the inward-facing state, to effect the inward release of sodium and benzylhydantoin, is primarily achieved by a rigid body movement of transmembrane helices 3, 4, 8, and 9 relative to the rest of the protein. This forms the basis of an alternating access mechanism applicable to many transporters of this emerging superfamily.

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Year:  2010        PMID: 20413494      PMCID: PMC2885435          DOI: 10.1126/science.1186303

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  28 in total

1.  PHENIX: building new software for automated crystallographic structure determination.

Authors:  Paul D Adams; Ralf W Grosse-Kunstleve; Li Wei Hung; Thomas R Ioerger; Airlie J McCoy; Nigel W Moriarty; Randy J Read; James C Sacchettini; Nicholas K Sauter; Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

Review 2.  Active sugar transport in health and disease.

Authors:  E M Wright; B A Hirayama; D F Loo
Journal:  J Intern Med       Date:  2007-01       Impact factor: 8.989

3.  Human L-type amino acid transporter 1 (LAT1): characterization of function and expression in tumor cell lines.

Authors:  O Yanagida; Y Kanai; A Chairoungdua; D K Kim; H Segawa; T Nii; S H Cha; H Matsuo; J Fukushima; Y Fukasawa; Y Tani; Y Taketani; H Uchino; J Y Kim; J Inatomi; I Okayasu; K Miyamoto; E Takeda; T Goya; H Endou
Journal:  Biochim Biophys Acta       Date:  2001-10-01

4.  Translocation pathway in the catalysis of active transport.

Authors:  C Tanford
Journal:  Proc Natl Acad Sci U S A       Date:  1983-06       Impact factor: 11.205

5.  Mechanism of substrate recognition and transport by an amino acid antiporter.

Authors:  Xiang Gao; Lijun Zhou; Xuyao Jiao; Feiran Lu; Chuangye Yan; Xin Zeng; Jiawei Wang; Yigong Shi
Journal:  Nature       Date:  2010-01-20       Impact factor: 49.962

Review 6.  Structure and function of Na(+)-symporters with inverted repeats.

Authors:  Jeff Abramson; Ernest M Wright
Journal:  Curr Opin Struct Biol       Date:  2009-07-22       Impact factor: 6.809

7.  Molecular basis of transport and regulation in the Na(+)/betaine symporter BetP.

Authors:  Susanne Ressl; Anke C Terwisscha van Scheltinga; Clemens Vonrhein; Vera Ott; Christine Ziegler
Journal:  Nature       Date:  2009-03-05       Impact factor: 49.962

8.  Mechanism for alternating access in neurotransmitter transporters.

Authors:  Lucy R Forrest; Yuan-Wei Zhang; Miriam T Jacobs; Joan Gesmonde; Li Xie; Barry H Honig; Gary Rudnick
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-22       Impact factor: 11.205

9.  Crystallization of the hydantoin transporter Mhp1 from Microbacterium liquefaciens.

Authors:  Tatsuro Shimamura; Shunsuke Yajima; Shun'ichi Suzuki; Nicholas G Rutherford; John O'Reilly; Peter J F Henderson; So Iwata
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-11-28

10.  Structure and molecular mechanism of a nucleobase-cation-symport-1 family transporter.

Authors:  Simone Weyand; Tatsuro Shimamura; Shunsuke Yajima; Shun'ichi Suzuki; Osman Mirza; Kuakarun Krusong; Elisabeth P Carpenter; Nicholas G Rutherford; Jonathan M Hadden; John O'Reilly; Pikyee Ma; Massoud Saidijam; Simon G Patching; Ryan J Hope; Halina T Norbertczak; Peter C J Roach; So Iwata; Peter J F Henderson; Alexander D Cameron
Journal:  Science       Date:  2008-10-16       Impact factor: 47.728

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  139 in total

1.  Identification of a second substrate-binding site in solute-sodium symporters.

Authors:  Zheng Li; Ashley S E Lee; Susanne Bracher; Heinrich Jung; Aviv Paz; Jay P Kumar; Jeff Abramson; Matthias Quick; Lei Shi
Journal:  J Biol Chem       Date:  2014-11-14       Impact factor: 5.157

2.  Structure and mechanism of a glutamate-GABA antiporter.

Authors:  Dan Ma; Peilong Lu; Chuangye Yan; Chao Fan; Ping Yin; Jiawei Wang; Yigong Shi
Journal:  Nature       Date:  2012-03-11       Impact factor: 49.962

3.  Simulations of the alternating access mechanism of the sodium symporter Mhp1.

Authors:  Joshua L Adelman; Amy L Dale; Matthew C Zwier; Divesh Bhatt; Lillian T Chong; Daniel M Zuckerman; Michael Grabe
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

4.  Loop diuretic and ion-binding residues revealed by scanning mutagenesis of transmembrane helix 3 (TM3) of Na-K-Cl cotransporter (NKCC1).

Authors:  Suma Somasekharan; Jessica Tanis; Biff Forbush
Journal:  J Biol Chem       Date:  2012-03-21       Impact factor: 5.157

5.  Insights into transport mechanism from LeuT engineered to transport tryptophan.

Authors:  Chayne L Piscitelli; Eric Gouaux
Journal:  EMBO J       Date:  2011-09-27       Impact factor: 11.598

6.  Bendix: intuitive helix geometry analysis and abstraction.

Authors:  Anna Caroline E Dahl; Matthieu Chavent; Mark S P Sansom
Journal:  Bioinformatics       Date:  2012-06-23       Impact factor: 6.937

7.  Computational study of the Na+/H + antiporter from Vibrio parahaemolyticus.

Authors:  Assaf Ganoth; Raphael Alhadeff; Isaiah T Arkin
Journal:  J Mol Model       Date:  2010-11-24       Impact factor: 1.810

8.  Two Na+ Sites Control Conformational Change in a Neurotransmitter Transporter Homolog.

Authors:  Sotiria Tavoulari; Eleonora Margheritis; Anu Nagarajan; David C DeWitt; Yuan-Wei Zhang; Edwin Rosado; Silvia Ravera; Elizabeth Rhoades; Lucy R Forrest; Gary Rudnick
Journal:  J Biol Chem       Date:  2015-11-18       Impact factor: 5.157

9.  Functional identification of the hypoxanthine/guanine transporters YjcD and YgfQ and the adenine transporters PurP and YicO of Escherichia coli K-12.

Authors:  Konstantinos Papakostas; Maria Botou; Stathis Frillingos
Journal:  J Biol Chem       Date:  2013-11-08       Impact factor: 5.157

Review 10.  Computational characterization of structural dynamics underlying function in active membrane transporters.

Authors:  Jing Li; Po-Chao Wen; Mahmoud Moradi; Emad Tajkhorshid
Journal:  Curr Opin Struct Biol       Date:  2015-04-27       Impact factor: 6.809

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