Literature DB >> 23093406

Metabolic mechanism of mannan in a ruminal bacterium, Ruminococcus albus, involving two mannoside phosphorylases and cellobiose 2-epimerase: discovery of a new carbohydrate phosphorylase, β-1,4-mannooligosaccharide phosphorylase.

Ryosuke Kawahara1, Wataru Saburi, Rei Odaka, Hidenori Taguchi, Shigeaki Ito, Haruhide Mori, Hirokazu Matsui.   

Abstract

Ruminococcus albus is a typical ruminal bacterium digesting cellulose and hemicellulose. Cellobiose 2-epimerase (CE; EC 5.1.3.11), which converts cellobiose to 4-O-β-D-glucosyl-D-mannose, is a particularly unique enzyme in R. albus, but its physiological function is unclear. Recently, a new metabolic pathway of mannan involving CE was postulated for another CE-producing bacterium, Bacteroides fragilis. In this pathway, β-1,4-mannobiose is epimerized to 4-O-β-D-mannosyl-D-glucose (Man-Glc) by CE, and Man-Glc is phosphorolyzed to α-D-mannosyl 1-phosphate (Man1P) and D-glucose by Man-Glc phosphorylase (MP; EC 2.4.1.281). Ruminococcus albus NE1 showed intracellular MP activity, and two MP isozymes, RaMP1 and RaMP2, were obtained from the cell-free extract. These enzymes were highly specific for the mannosyl residue at the non-reducing end of the substrate and catalyzed the phosphorolysis and synthesis of Man-Glc through a sequential Bi Bi mechanism. In a synthetic reaction, RaMP1 showed high activity only toward D-glucose and 6-deoxy-D-glucose in the presence of Man1P, whereas RaMP2 showed acceptor specificity significantly different from RaMP1. RaMP2 acted on D-glucose derivatives at the C2- and C3-positions, including deoxy- and deoxyfluoro-analogues and epimers, but not on those substituted at the C6-position. Furthermore, RaMP2 had high synthetic activity toward the following oligosaccharides: β-linked glucobioses, maltose, N,N'-diacetylchitobiose, and β-1,4-mannooligosaccharides. Particularly, β-1,4-mannooligosaccharides served as significantly better acceptor substrates for RaMP2 than D-glucose. In the phosphorolytic reactions, RaMP2 had weak activity toward β-1,4-mannobiose but efficiently degraded β-1,4-mannooligosaccharides longer than β-1,4-mannobiose. Consequently, RaMP2 is thought to catalyze the phosphorolysis of β-1,4-mannooligosaccharides longer than β-1,4-mannobiose to produce Man1P and β-1,4-mannobiose.

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Year:  2012        PMID: 23093406      PMCID: PMC3516782          DOI: 10.1074/jbc.M112.390336

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  32 in total

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4.  Crystal structure of exo-inulinase from Aspergillus awamori: the enzyme fold and structural determinants of substrate recognition.

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5.  Structural basis for thermostability of endo-1,5-alpha-L-arabinanase from Bacillus thermodenitrificans TS-3.

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6.  Crystal structure of maltose phosphorylase from Lactobacillus brevis: unexpected evolutionary relationship with glucoamylases.

Authors:  M P Egloff; J Uppenberg; L Haalck; H van Tilbeurgh
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8.  Structural framework of fructosyl transfer in Bacillus subtilis levansucrase.

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Journal:  Nat Struct Biol       Date:  2003-09-28

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Authors:  Didier Nurizzo; Johan P Turkenburg; Simon J Charnock; Shirley M Roberts; Eleanor J Dodson; Vincent A McKie; Edward J Taylor; Harry J Gilbert; Gideon J Davies
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  19 in total

1.  Structural and biochemical basis for mannan utilization by Caldanaerobius polysaccharolyticus strain ATCC BAA-17.

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Journal:  J Biol Chem       Date:  2014-10-23       Impact factor: 5.157

2.  Role of glycoside phosphorylases in mannose foraging by human gut bacteria.

Authors:  Simon Ladevèze; Laurence Tarquis; Davide A Cecchini; Juliette Bercovici; Isabelle André; Christopher M Topham; Sandrine Morel; Elisabeth Laville; Pierre Monsan; Vincent Lombard; Bernard Henrissat; Gabrielle Potocki-Véronèse
Journal:  J Biol Chem       Date:  2013-09-16       Impact factor: 5.157

3.  Structural insights into the epimerization of β-1,4-linked oligosaccharides catalyzed by cellobiose 2-epimerase, the sole enzyme epimerizing non-anomeric hydroxyl groups of unmodified sugars.

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4.  Discovery of β-1,4-D-mannosyl-N-acetyl-D-glucosamine phosphorylase involved in the metabolism of N-glycans.

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Review 5.  Enzymatic synthesis using glycoside phosphorylases.

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6.  Elucidation of the recognition mechanisms for hemicellulose and pectin in Clostridium cellulovorans using intracellular quantitative proteome analysis.

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7.  Structural bases for N-glycan processing by mannoside phosphorylase.

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8.  Human Gut Faecalibacterium prausnitzii Deploys a Highly Efficient Conserved System To Cross-Feed on β-Mannan-Derived Oligosaccharides.

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9.  2-O-α-D-glucosylglycerol phosphorylase from Bacillus selenitireducens MLS10 possessing hydrolytic activity on β-D-glucose 1-phosphate.

Authors:  Takanori Nihira; Yuka Saito; Ken'ichi Ohtsubo; Hiroyuki Nakai; Motomitsu Kitaoka
Journal:  PLoS One       Date:  2014-01-22       Impact factor: 3.240

10.  The GH130 Family of Mannoside Phosphorylases Contains Glycoside Hydrolases That Target β-1,2-Mannosidic Linkages in Candida Mannan.

Authors:  Fiona Cuskin; Arnaud Baslé; Simon Ladevèze; Alison M Day; Harry J Gilbert; Gideon J Davies; Gabrielle Potocki-Véronèse; Elisabeth C Lowe
Journal:  J Biol Chem       Date:  2015-08-18       Impact factor: 5.157

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