Literature DB >> 23085905

Parallel multigrid solver of radiative transfer equation for photon transport via graphics processing unit.

Hao Gao1, Lan Phan, Yuting Lin.   

Abstract

A graphics processing unit-based parallel multigrid solver for a radiative transfer equation with vacuum boundary condition or reflection boundary condition is presented for heterogeneous media with complex geometry based on two-dimensional triangular meshes or three-dimensional tetrahedral meshes. The computational complexity of this parallel solver is linearly proportional to the degrees of freedom in both angular and spatial variables, while the full multigrid method is utilized to minimize the number of iterations. The overall gain of speed is roughly 30 to 300 fold with respect to our prior multigrid solver, which depends on the underlying regime and the parallelization. The numerical validations are presented with the MATLAB codes at https://sites.google.com/site/rtefastsolver/.

Mesh:

Year:  2012        PMID: 23085905      PMCID: PMC3497889          DOI: 10.1117/1.JBO.17.9.096004

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  10 in total

1.  Algorithm for solving the equation of radiative transfer in the frequency domain.

Authors:  Kui Ren; Gassan S Abdoulaev; Guillaume Bal; Andreas H Hielscher
Journal:  Opt Lett       Date:  2004-03-15       Impact factor: 3.776

2.  Quantitative fluorescence tomography using a trimodality system: in vivo validation.

Authors:  Yuting Lin; William C Barber; Jan S Iwanczyk; Werner W Roeck; Orhan Nalcioglu; Gultekin Gulsen
Journal:  J Biomed Opt       Date:  2010 Jul-Aug       Impact factor: 3.170

3.  Hybrid radiative-transfer-diffusion model for optical tomography.

Authors:  Tanja Tarvainen; Marko Vauhkonen; Ville Kolehmainen; Jari P Kaipio
Journal:  Appl Opt       Date:  2005-02-20       Impact factor: 1.980

4.  A photo-multiplier tube-based hybrid MRI and frequency domain fluorescence tomography system for small animal imaging.

Authors:  Y Lin; M T Ghijsen; H Gao; N Liu; O Nalcioglu; G Gulsen
Journal:  Phys Med Biol       Date:  2011-07-13       Impact factor: 3.609

5.  Radiative transport-based frequency-domain fluorescence tomography.

Authors:  Amit Joshi; John C Rasmussen; Eva M Sevick-Muraca; Todd A Wareing; John McGhee
Journal:  Phys Med Biol       Date:  2008-03-26       Impact factor: 3.609

6.  Multilevel bioluminescence tomography based on radiative transfer equation Part 1: l1 regularization.

Authors:  Hao Gao; Hongkai Zhao
Journal:  Opt Express       Date:  2010-02-01       Impact factor: 3.894

7.  Multilevel bioluminescence tomography based on radiative transfer equation part 2: total variation and l1 data fidelity.

Authors:  Hao Gao; Hongkai Zhao
Journal:  Opt Express       Date:  2010-02-01       Impact factor: 3.894

8.  Graphics processing unit parallel accelerated solution of the discrete ordinates for photon transport in biological tissues.

Authors:  Kuan Peng; Xinbo Gao; Xiaochao Qu; Nunu Ren; Xueli Chen; Xiaowei He; Xiaorei Wang; Jimin Liang; Jie Tian
Journal:  Appl Opt       Date:  2011-07-20       Impact factor: 1.980

9.  Tumor characterization in small animals using magnetic resonance-guided dynamic contrast enhanced diffuse optical tomography.

Authors:  Yuting Lin; Dave Thayer; Orhan Nalcioglu; Gultekin Gulsen
Journal:  J Biomed Opt       Date:  2011-10       Impact factor: 3.170

10.  ANALYSIS OF A NUMERICAL SOLVER FOR RADIATIVE TRANSPORT EQUATION.

Authors:  Hao Gao; Hongkai Zhao
Journal:  Math Comput       Date:  2013-01-01       Impact factor: 2.417

  10 in total
  1 in total

1.  Fast linear solver for radiative transport equation with multiple right hand sides in diffuse optical tomography.

Authors:  Jingfei Jia; Hyun K Kim; Andreas H Hielscher
Journal:  J Quant Spectrosc Radiat Transf       Date:  2015-12-01       Impact factor: 2.468

  1 in total

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