Literature DB >> 23079596

An RNAi screen reveals intestinal regulators of branching morphogenesis, differentiation, and stem cell proliferation in planarians.

David J Forsthoefel1, Noëlle P James, David J Escobar, Joel M Stary, Ana P Vieira, Forrest A Waters, Phillip A Newmark.   

Abstract

Planarians grow and regenerate organs by coordinating proliferation and differentiation of pluripotent stem cells with remodeling of postmitotic tissues. Understanding how these processes are orchestrated requires characterizing cell-type-specific gene expression programs and their regulation during regeneration and homeostasis. To this end, we analyzed the expression profile of planarian intestinal phagocytes, cells responsible for digestion and nutrient storage/distribution. Utilizing RNA interference, we identified cytoskeletal regulators required for intestinal branching morphogenesis and a modulator of bioactive sphingolipid metabolism, ceramide synthase, required for the production of functional phagocytes. Additionally, we found that a gut-enriched homeobox transcription factor, nkx-2.2, is required for somatic stem cell proliferation, suggesting a niche-like role for phagocytes. Identification of evolutionarily conserved regulators of intestinal branching, differentiation, and stem cell dynamics demonstrates the utility of the planarian digestive system as a model for elucidating the mechanisms controlling postembryonic organogenesis.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23079596      PMCID: PMC3521571          DOI: 10.1016/j.devcel.2012.09.008

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  84 in total

1.  A regulatory program for excretory system regeneration in planarians.

Authors:  M Lucila Scimone; Mansi Srivastava; George W Bell; Peter W Reddien
Journal:  Development       Date:  2011-10       Impact factor: 6.868

2.  A doubly inducible system for RNA interference and rapid RNAi plasmid construction in Trypanosoma brucei.

Authors:  Vincent P Alibu; Lilian Storm; Simon Haile; Christine Clayton; David Horn
Journal:  Mol Biochem Parasitol       Date:  2005-01       Impact factor: 1.759

Review 3.  Regenerating the central nervous system: how easy for planarians!

Authors:  Francesc Cebrià
Journal:  Dev Genes Evol       Date:  2007-11-13       Impact factor: 0.900

4.  The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: analysis of ESTs from the hermaphroditic strain.

Authors:  Ricardo M Zayas; Alvaro Hernández; Bianca Habermann; Yuying Wang; Joel M Stary; Phillip A Newmark
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-12       Impact factor: 11.205

Review 5.  Sphingolipid synthetic pathways are major regulators of lipid homeostasis.

Authors:  Tilla S Worgall
Journal:  Adv Exp Med Biol       Date:  2011       Impact factor: 2.622

6.  Dopamine controls neurogenesis in the adult salamander midbrain in homeostasis and during regeneration of dopamine neurons.

Authors:  Daniel A Berg; Matthew Kirkham; Heng Wang; Jonas Frisén; András Simon
Journal:  Cell Stem Cell       Date:  2011-04-08       Impact factor: 24.633

Review 7.  Mammalian Rho GTPases: new insights into their functions from in vivo studies.

Authors:  Sarah J Heasman; Anne J Ridley
Journal:  Nat Rev Mol Cell Biol       Date:  2008-09       Impact factor: 94.444

8.  Morphallactic regeneration as revealed by region-specific gene expression in the digestive tract of Enchytraeus japonensis (Oligochaeta, Annelida).

Authors:  Makoto Takeo; Chikako Yoshida-Noro; Shin Tochinai
Journal:  Dev Dyn       Date:  2008-05       Impact factor: 3.780

Review 9.  Cardiac regeneration.

Authors:  Wen-Yee Choi; Kenneth D Poss
Journal:  Curr Top Dev Biol       Date:  2012       Impact factor: 4.897

10.  Genomic organization and expression of the planarian homeobox genes Dth-1 and Dth-2.

Authors:  J Garcia-Fernàndez; J Baguñà; E Saló
Journal:  Development       Date:  1993-05       Impact factor: 6.868

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  56 in total

1.  Molecular cloning and characterization of SL3: a stem cell-specific SL RNA from the planarian Schmidtea mediterranea.

Authors:  Alessandro Rossi; Eric J Ross; Antonia Jack; Alejandro Sánchez Alvarado
Journal:  Gene       Date:  2013-10-08       Impact factor: 3.688

2.  Embryonic origin of adult stem cells required for tissue homeostasis and regeneration.

Authors:  Erin L Davies; Kai Lei; Christopher W Seidel; Amanda E Kroesen; Sean A McKinney; Longhua Guo; Sofia Mc Robb; Eric J Ross; Kirsten Gotting; Alejandro Sánchez Alvarado
Journal:  Elife       Date:  2017-01-10       Impact factor: 8.140

Review 3.  RNAi screening comes of age: improved techniques and complementary approaches.

Authors:  Stephanie E Mohr; Jennifer A Smith; Caroline E Shamu; Ralph A Neumüller; Norbert Perrimon
Journal:  Nat Rev Mol Cell Biol       Date:  2014-09       Impact factor: 94.444

4.  Insights into the histology of planarian flatworm Phagocata gracilis based on location specific, intact lipid information provided by GCIB-ToF-SIMS imaging.

Authors:  Tina B Angerer; Neil Chakravarty; Michael J Taylor; Carrie D Nicora; Daniel J Graham; Christopher R Anderton; Eric H Chudler; Lara J Gamble
Journal:  Biochim Biophys Acta Mol Cell Biol Lipids       Date:  2019-02-04       Impact factor: 4.698

5.  Sirtuin-1 regulates organismal growth by altering feeding behavior and intestinal morphology in planarians.

Authors:  Benjamin Ziman; Peter Karabinis; Paul Barghouth; Néstor J Oviedo
Journal:  J Cell Sci       Date:  2020-05-27       Impact factor: 5.285

6.  Preparation of the planarian Schmidtea mediterranea for high-resolution histology and transmission electron microscopy.

Authors:  John L Brubacher; Ana P Vieira; Phillip A Newmark
Journal:  Nat Protoc       Date:  2014-02-20       Impact factor: 13.491

7.  Cell-type diversity and regionalized gene expression in the planarian intestine.

Authors:  David J Forsthoefel; Nicholas I Cejda; Umair W Khan; Phillip A Newmark
Journal:  Elife       Date:  2020-04-02       Impact factor: 8.140

Review 8.  Lessons for inductive germline determination.

Authors:  Riyad N H Seervai; Gary M Wessel
Journal:  Mol Reprod Dev       Date:  2013-02-28       Impact factor: 2.609

9.  Pathogenic shifts in endogenous microbiota impede tissue regeneration via distinct activation of TAK1/MKK/p38.

Authors:  Christopher P Arnold; M Shane Merryman; Aleishia Harris-Arnold; Sean A McKinney; Chris W Seidel; Sydney Loethen; Kylie N Proctor; Longhua Guo; Alejandro Sánchez Alvarado
Journal:  Elife       Date:  2016-07-21       Impact factor: 8.140

Review 10.  Regeneration Genetics.

Authors:  Chen-Hui Chen; Kenneth D Poss
Journal:  Annu Rev Genet       Date:  2017-08-30       Impact factor: 16.830

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