Literature DB >> 23076586

Mammalian expression of isotopically labeled proteins for NMR spectroscopy.

Mallika Sastry1, Carole A Bewley, Peter D Kwong.   

Abstract

NMR spectroscopic characterization of biologically interesting proteins generally requires the incorporation of (15)N/(13)C and/or (2)H stable isotopes. While prokaryotic incorporation systems are regularly used, mammalian ones are not: of the nearly 9,000 NMR macromolecular structures currently deposited in the Protein Data Bank, only a handful (<0.5%) were solved with proteins expressed in mammalian systems. This low number of structures is largely a reflection of the difficulty in producing uniformly labeled, mammalian-expressed proteins. This is unfortunate, as many interesting proteins require mammalian cofactors, chaperons, or post-translational modifications such as N-linked glycosylation, and mammalian cells have the necessary machinery to produce them correctly. Here we describe recent advances in mammalian expression, including an efficient adenoviral vector-based system, for the production of isotopically enriched proteins. This system allows for the expression of mammalian proteins and their complexes, including proteins that require post-translational modifications. We describe how this system can produce isotopically labeled (15)N and (13)C post-translationally modified proteins, such as the outer domain of HIV-1 gp120, which has 15 sites of N-linked glycosylation. Selective amino-acid labeling is also described. These developments should reduce barriers to the determination of NMR structures with isotopically labeled proteins from mammalian expression systems.

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Year:  2012        PMID: 23076586     DOI: 10.1007/978-94-007-4954-2_11

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  5 in total

Review 1.  Current strategies for protein production and purification enabling membrane protein structural biology.

Authors:  Aditya Pandey; Kyungsoo Shin; Robin E Patterson; Xiang-Qin Liu; Jan K Rainey
Journal:  Biochem Cell Biol       Date:  2016-01-20       Impact factor: 3.626

2.  CombLabel: rational design of optimized sequence-specific combinatorial labeling schemes. Application to backbone assignment of membrane proteins with low stability.

Authors:  M Yu Myshkin; M A Dubinnyi; D S Kulbatskii; E N Lyukmanova; M P Kirpichnikov; Z O Shenkarev
Journal:  J Biomol NMR       Date:  2019-07-08       Impact factor: 2.835

3.  Characterizing carbohydrate-protein interactions by nuclear magnetic resonance spectroscopy.

Authors:  Carole A Bewley; Syed Shahzad-ul-Hussan
Journal:  Biopolymers       Date:  2013-10       Impact factor: 2.505

Review 4.  Modern Technologies of Solution Nuclear Magnetic Resonance Spectroscopy for Three-dimensional Structure Determination of Proteins Open Avenues for Life Scientists.

Authors:  Toshihiko Sugiki; Naohiro Kobayashi; Toshimichi Fujiwara
Journal:  Comput Struct Biotechnol J       Date:  2017-04-13       Impact factor: 7.271

5.  Proton Detected Solid-State NMR of Membrane Proteins at 28 Tesla (1.2 GHz) and 100 kHz Magic-Angle Spinning.

Authors:  Evgeny Nimerovsky; Kumar Tekwani Movellan; Xizhou Cecily Zhang; Marcel C Forster; Eszter Najbauer; Kai Xue; Rıza Dervişoǧlu; Karin Giller; Christian Griesinger; Stefan Becker; Loren B Andreas
Journal:  Biomolecules       Date:  2021-05-18
  5 in total

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