Literature DB >> 23076438

Mutation of the pentatricopeptide repeat-SMR protein SVR7 impairs accumulation and translation of chloroplast ATP synthase subunits in Arabidopsis thaliana.

Reimo Zoschke1, Yujiao Qu, Yan O Zubo, Thomas Börner, Christian Schmitz-Linneweber.   

Abstract

RNA processing, RNA editing, RNA splicing and translational activation of RNAs are essential post-transcriptional steps in chloroplast gene expression. Typically, the factors mediating those processes are nuclear encoded and post-translationally imported into the chloroplasts. In land plants, members of the large pentatricopeptide repeat (PPR) protein family are required for individual steps in chloroplast RNA processing. Interestingly, a subgroup of PPR proteins carries a C-terminal small MutS related (SMR) domain. Here we analyzed the consequences of mutations in the SVR7 gene, which encodes a PPR-SMR protein, in Arabidopsis thaliana. We demonstrate that SVR7 mutations lead to a specific reduction in chloroplast ATP synthase levels. Furthermore, we found aberrant transcript patterns for ATP synthase coding mRNAs in svr7 mutants. Finally, a reduced ribosome association of atpB/E and rbcL mRNAs in svr7 mutants suggests the involvement of the PPR-SMR protein SVR7 in translational activation of these mRNAs. We describe that the function of SVR7 in translation has expanded relative to its maize ortholog ATP4. The results provide evidence for a relaxed functional conservation of this PPR-SMR protein in eudicotyledonous and monocotyledonous plants, thus adding to the knowledge about the function and evolution of PPR-SMR proteins.

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Year:  2012        PMID: 23076438     DOI: 10.1007/s10265-012-0527-1

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  60 in total

1.  Affinity purification of the tobacco plastid RNA polymerase and in vitro reconstitution of the holoenzyme.

Authors:  Jon Y Suzuki; A Jimmy Ytterberg; Thomas A Beardslee; Lori A Allison; Klaas Jan Wijk; Pal Maliga
Journal:  Plant J       Date:  2004-10       Impact factor: 6.417

2.  Site-specific binding of a PPR protein defines and stabilizes 5' and 3' mRNA termini in chloroplasts.

Authors:  Jeannette Pfalz; Omer Ali Bayraktar; Jana Prikryl; Alice Barkan
Journal:  EMBO J       Date:  2009-05-07       Impact factor: 11.598

3.  Sequence-specific binding of a chloroplast pentatricopeptide repeat protein to its native group II intron ligand.

Authors:  Rosalind Williams-Carrier; Tiffany Kroeger; Alice Barkan
Journal:  RNA       Date:  2008-07-30       Impact factor: 4.942

Review 4.  Reconstructing evolution: gene transfer from plastids to the nucleus.

Authors:  Ralph Bock; Jeremy N Timmis
Journal:  Bioessays       Date:  2008-06       Impact factor: 4.345

5.  A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing.

Authors:  Kenji Okuda; Takahiro Nakamura; Mamoru Sugita; Toshiyuki Shimizu; Toshiharu Shikanai
Journal:  J Biol Chem       Date:  2006-10-02       Impact factor: 5.157

6.  Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.

Authors:  Claire Lurin; Charles Andrés; Sébastien Aubourg; Mohammed Bellaoui; Frédérique Bitton; Clémence Bruyère; Michel Caboche; Cédrig Debast; José Gualberto; Beate Hoffmann; Alain Lecharny; Monique Le Ret; Marie-Laure Martin-Magniette; Hakim Mireau; Nemo Peeters; Jean-Pierre Renou; Boris Szurek; Ludivine Taconnat; Ian Small
Journal:  Plant Cell       Date:  2004-07-21       Impact factor: 11.277

7.  The pentatricopeptide repeat protein PPR5 stabilizes a specific tRNA precursor in maize chloroplasts.

Authors:  Susanne Beick; Christian Schmitz-Linneweber; Rosalind Williams-Carrier; Bryan Jensen; Alice Barkan
Journal:  Mol Cell Biol       Date:  2008-06-30       Impact factor: 4.272

8.  Two CRM protein subfamilies cooperate in the splicing of group IIB introns in chloroplasts.

Authors:  Yukari Asakura; Omer Ali Bayraktar; Alice Barkan
Journal:  RNA       Date:  2008-09-17       Impact factor: 4.942

9.  pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression.

Authors:  Jeannette Pfalz; Karsten Liere; Andrea Kandlbinder; Karl-Josef Dietz; Ralf Oelmüller
Journal:  Plant Cell       Date:  2005-12-02       Impact factor: 11.277

10.  High diversity of plastidial promoters in Arabidopsis thaliana.

Authors:  Monika Swiatecka-Hagenbruch; Karsten Liere; Thomas Börner
Journal:  Mol Genet Genomics       Date:  2007-03-01       Impact factor: 2.980

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  27 in total

1.  PPR proteins of green algae.

Authors:  Nicolas J Tourasse; Yves Choquet; Olivier Vallon
Journal:  RNA Biol       Date:  2013-08-28       Impact factor: 4.652

2.  PPR-SMR protein SOT1 has RNA endonuclease activity.

Authors:  Wen Zhou; Qingtao Lu; Qingwei Li; Lei Wang; Shunhua Ding; Aihong Zhang; Xiaogang Wen; Lixin Zhang; Congming Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-06       Impact factor: 11.205

3.  Nucleus-Encoded Protein BFA1 Promotes Efficient Assembly of the Chloroplast ATP Synthase Coupling Factor 1.

Authors:  Lin Zhang; Hua Pu; Zhikun Duan; Yonghong Li; Bei Liu; Qiqi Zhang; Wenjing Li; Jean-David Rochaix; Lin Liu; Lianwei Peng
Journal:  Plant Cell       Date:  2018-07-16       Impact factor: 11.277

4.  2016 Awards in the Journal of Plant Research.

Authors:  Ikuo Nishida
Journal:  J Plant Res       Date:  2016-11       Impact factor: 2.629

Review 5.  Chloroplast Translation: Structural and Functional Organization, Operational Control, and Regulation.

Authors:  Reimo Zoschke; Ralph Bock
Journal:  Plant Cell       Date:  2018-04-02       Impact factor: 11.277

Review 6.  Understanding chloroplast biogenesis using second-site suppressors of immutans and var2.

Authors:  Aarthi Putarjunan; Xiayan Liu; Trevor Nolan; Fei Yu; Steve Rodermel
Journal:  Photosynth Res       Date:  2013-05-24       Impact factor: 3.573

7.  BIOGENESIS FACTOR REQUIRED FOR ATP SYNTHASE 3 Facilitates Assembly of the Chloroplast ATP Synthase Complex.

Authors:  Lin Zhang; Zhikun Duan; Jiao Zhang; Lianwei Peng
Journal:  Plant Physiol       Date:  2016-04-18       Impact factor: 8.340

8.  The PPR-SMR Protein ATP4 Is Required for Editing the Chloroplast rps8 mRNA in Rice and Maize.

Authors:  Jinghong Zhang; Yipo Guo; Qian Fang; Yongli Zhu; Yang Zhang; Xuejiao Liu; Yongjun Lin; Alice Barkan; Fei Zhou
Journal:  Plant Physiol       Date:  2020-09-14       Impact factor: 8.340

9.  The PPR-SMR protein PPR53 enhances the stability and translation of specific chloroplast RNAs in maize.

Authors:  Reimo Zoschke; Kenneth P Watkins; Rafael G Miranda; Alice Barkan
Journal:  Plant J       Date:  2016-02-05       Impact factor: 6.417

10.  The MTL1 Pentatricopeptide Repeat Protein Is Required for Both Translation and Splicing of the Mitochondrial NADH DEHYDROGENASE SUBUNIT7 mRNA in Arabidopsis.

Authors:  Nawel Haïli; Noelya Planchard; Nadège Arnal; Martine Quadrado; Nathalie Vrielynck; Jennifer Dahan; Catherine Colas des Francs-Small; Hakim Mireau
Journal:  Plant Physiol       Date:  2015-11-04       Impact factor: 8.340

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