Literature DB >> 23073020

SWP1 negatively regulates lateral root initiation and elongation in Arabidopsis.

Sharmila Singh1, Archita Singh, Shradha Roy, Ananda K Sarkar.   

Abstract

The main root and continuously emerging lateral roots constitute the root architecture of an adult plant during its postembryonic development. Epigenetic modifications like methylation or deacetylation of histones have been suggested to regulate root development. SWP1/LDL1, a component of plant specific corepressor complex, has been implicated in the induction of flowers and root through histone modifications in Arabidopsis. However, molecular role of SWP1 in regulating the lateral root development remained unexplored. Here we show that SWP1 regulates lateral root initiation and elongation in Arabidopsis. Mutation in SWP1 increases both the density and length of lateral roots. SWP1 negatively regulates lateral root initiation through direct/indirect transcriptional repression of lateral root promoting factors, such as AUXIN RESPONSE FACTORS (ARFs) and GATA23.

Entities:  

Keywords:  ARF; Arabidopsis; LDL1; SWP1; histone modification; lateral root; root meristem

Mesh:

Substances:

Year:  2012        PMID: 23073020      PMCID: PMC3578883          DOI: 10.4161/psb.22099

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  26 in total

Review 1.  Chromatin regulation of plant development.

Authors:  Doris Wagner
Journal:  Curr Opin Plant Biol       Date:  2003-02       Impact factor: 7.834

Review 2.  The many faces of REST oversee epigenetic programming of neuronal genes.

Authors:  Nurit Ballas; Gail Mandel
Journal:  Curr Opin Neurobiol       Date:  2005-10       Impact factor: 6.627

Review 3.  Regulation of meristem activity by chromatin remodelling.

Authors:  Soazig Guyomarc'h; Claire Bertrand; Marianne Delarue; Dao-Xiu Zhou
Journal:  Trends Plant Sci       Date:  2005-07       Impact factor: 18.313

4.  C2H2 zinc finger-SET histone methyltransferase is a plant-specific chromatin modifier.

Authors:  Alexander Krichevsky; Helen Gutgarts; Stanislav V Kozlovsky; Tzvi Tzfira; Ann Sutton; Rolf Sternglanz; Gail Mandel; Vitaly Citovsky
Journal:  Dev Biol       Date:  2006-11-10       Impact factor: 3.582

5.  ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis.

Authors:  Yoko Okushima; Hidehiro Fukaki; Makoto Onoda; Athanasios Theologis; Masao Tasaka
Journal:  Plant Cell       Date:  2007-01-26       Impact factor: 11.277

6.  Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT/IAA14 gene of Arabidopsis.

Authors:  Hidehiro Fukaki; Satoshi Tameda; Haruka Masuda; Masao Tasaka
Journal:  Plant J       Date:  2002-01       Impact factor: 6.417

7.  Early primordium morphogenesis during lateral root initiation in Arabidopsis thaliana.

Authors:  J G Dubrovsky; T L Rost; A Colón-Carmona; P Doerner
Journal:  Planta       Date:  2001-11       Impact factor: 4.116

8.  Tissue-specific expression of stabilized SOLITARY-ROOT/IAA14 alters lateral root development in Arabidopsis.

Authors:  Hidehiro Fukaki; Yoko Nakao; Yoko Okushima; Athanasios Theologis; Masao Tasaka
Journal:  Plant J       Date:  2005-11       Impact factor: 6.417

9.  Coordinated polar localization of auxin efflux carrier PIN1 by GNOM ARF GEF.

Authors:  T Steinmann; N Geldner; M Grebe; S Mangold; C L Jackson; S Paris; L Gälweiler; K Palme; G Jürgens
Journal:  Science       Date:  1999-10-08       Impact factor: 47.728

10.  Arabidopsis relatives of the human lysine-specific Demethylase1 repress the expression of FWA and FLOWERING LOCUS C and thus promote the floral transition.

Authors:  Danhua Jiang; Wannian Yang; Yuehui He; Richard M Amasino
Journal:  Plant Cell       Date:  2007-10-05       Impact factor: 11.277

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  10 in total

1.  Balanced activity of microRNA166/165 and its target transcripts from the class III homeodomain-leucine zipper family regulates root growth in Arabidopsis thaliana.

Authors:  Archita Singh; Sharmila Singh; Kishore C S Panigrahi; Ralf Reski; Ananda K Sarkar
Journal:  Plant Cell Rep       Date:  2014-02-07       Impact factor: 4.570

2.  Giberellic Acid-Stimulated Transcript Proteins Evolved through Successive Conjugation of Novel Motifs and Their Subfunctionalization.

Authors:  Ashutosh Kumar; Alka Singh; Pramod Kumar; Ananda K Sarkar
Journal:  Plant Physiol       Date:  2019-04-10       Impact factor: 8.340

3.  Genome-wide identification and expression analysis of the GSK gene family in wheat (Triticum aestivum L.).

Authors:  Peipei Zhang; Linghui Zhang; Tao Chen; Fanli Jing; Yuan Liu; Jingfu Ma; Tian Tian; Delong Yang
Journal:  Mol Biol Rep       Date:  2022-01-27       Impact factor: 2.316

4.  Functional Characterization of the Lysine-Specific Histone Demethylases Family in Soybean.

Authors:  Mengshi Liu; Jiacan Jiang; Yapeng Han; Mengying Shi; Xianli Li; Yingxiang Wang; Zhicheng Dong; Cunyi Yang
Journal:  Plants (Basel)       Date:  2022-05-25

5.  An Efficient LCM-Based Method for Tissue Specific Expression Analysis of Genes and miRNAs.

Authors:  Vibhav Gautam; Archita Singh; Sharmila Singh; Ananda K Sarkar
Journal:  Sci Rep       Date:  2016-02-10       Impact factor: 4.379

6.  Expression dynamics of miRNAs and their targets in seed germination conditions reveals miRNA-ta-siRNA crosstalk as regulator of seed germination.

Authors:  Shabari Sarkar Das; Sandeep Yadav; Archita Singh; Vibhav Gautam; Ananda K Sarkar; Asis K Nandi; Prakash Karmakar; Manoj Majee; Neeti Sanan-Mishra
Journal:  Sci Rep       Date:  2018-01-19       Impact factor: 4.379

7.  Phytohormonal crosstalk modulates the expression of miR166/165s, target Class III HD-ZIPs, and KANADI genes during root growth in Arabidopsis thaliana.

Authors:  Archita Singh; Shradha Roy; Sharmila Singh; Shabari Sarkar Das; Vibhav Gautam; Sandeep Yadav; Ashutosh Kumar; Alka Singh; Sukanya Samantha; Ananda K Sarkar
Journal:  Sci Rep       Date:  2017-06-13       Impact factor: 4.379

8.  Sirtinol, a Sir2 protein inhibitor, affects stem cell maintenance and root development in Arabidopsis thaliana by modulating auxin-cytokinin signaling components.

Authors:  Sharmila Singh; Alka Singh; Sandeep Yadav; Vibhav Gautam; Archita Singh; Ananda K Sarkar
Journal:  Sci Rep       Date:  2017-02-14       Impact factor: 4.379

9.  Genome-Wide Identification of Histone Modification Gene Families in the Model Legume Medicago truncatula and Their Expression Analysis in Nodules.

Authors:  Loredana Lopez; Giorgio Perrella; Ornella Calderini; Andrea Porceddu; Francesco Panara
Journal:  Plants (Basel)       Date:  2022-01-26

10.  Coevolution Pattern and Functional Conservation or Divergence of miR167s and their targets across Diverse Plant Species.

Authors:  Suvakanta Barik; Ashutosh Kumar; Shabari Sarkar Das; Sandeep Yadav; Vibhav Gautam; Archita Singh; Sharmila Singh; Ananda K Sarkar
Journal:  Sci Rep       Date:  2015-10-13       Impact factor: 4.379

  10 in total

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