Literature DB >> 23060441

Comprehensive mass spectrometric mapping of the hydroxylated amino acid residues of the α1(V) collagen chain.

Chenxi Yang1, Arick C Park, Nicholas A Davis, Jason D Russell, Byoungjae Kim, David D Brand, Matthew J Lawrence, Ying Ge, Michael S Westphall, Joshua J Coon, Daniel S Greenspan.   

Abstract

BACKGROUND: α1(V) is an extensively modified collagen chain important in disease.
RESULTS: Comprehensive mapping of α1(V) post-translational modifications reveals unexpectedly large numbers of X-position hydroxyprolines in Gly-X-Y amino acid triplets.
CONCLUSION: The unexpected abundance of X-position hydroxyprolines suggests a mechanism for differential modification of collagen properties. SIGNIFICANCE: Positions, numbers, and occupancy of modified sites can provide insights into α1(V) biological properties. Aberrant expression of the type V collagen α1(V) chain can underlie the connective tissue disorder classic Ehlers-Danlos syndrome, and autoimmune responses against the α1(V) chain are linked to lung transplant rejection and atherosclerosis. The α1(V) collagenous COL1 domain is thought to contain greater numbers of post-translational modifications (PTMs) than do similar domains of other fibrillar collagen chains, PTMs consisting of hydroxylated prolines and lysines, the latter of which can be glycosylated. These types of PTMs can contribute to epitopes that underlie immune responses against collagens, and the high level of PTMs may contribute to the unique biological properties of the α1(V) chain. Here we use high resolution mass spectrometry to map such PTMs in bovine placental α1(V) and human recombinant pro-α1(V) procollagen chains. Findings include the locations of those PTMs that vary and those PTMs that are invariant between these α1(V) chains from widely divergent sources. Notably, an unexpectedly large number of hydroxyproline residues were mapped to the X-positions of Gly-X-Y triplets, contrary to expectations based on previous amino acid analyses of hydrolyzed α1(V) chains from various tissues. We attribute this difference to the ability of tandem mass spectrometry coupled to nanoflow chromatographic separations to detect lower-level PTM combinations with superior sensitivity and specificity. The data are consistent with the presence of a relatively large number of 3-hydroxyproline sites with less than 100% occupancy, suggesting a previously unknown mechanism for the differential modification of α1(V) chain and type V collagen properties.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23060441      PMCID: PMC3504773          DOI: 10.1074/jbc.M112.406850

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  80 in total

1.  Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry.

Authors:  Joshua E Elias; Steven P Gygi
Journal:  Nat Methods       Date:  2007-03       Impact factor: 28.547

2.  Performance characteristics of electron transfer dissociation mass spectrometry.

Authors:  David M Good; Matthew Wirtala; Graeme C McAlister; Joshua J Coon
Journal:  Mol Cell Proteomics       Date:  2007-08-01       Impact factor: 5.911

3.  Does trypsin cut before proline?

Authors:  Jesse Rodriguez; Nitin Gupta; Richard D Smith; Pavel A Pevzner
Journal:  J Proteome Res       Date:  2007-12-08       Impact factor: 4.466

4.  CRTAP is required for prolyl 3- hydroxylation and mutations cause recessive osteogenesis imperfecta.

Authors:  Roy Morello; Terry K Bertin; Yuqing Chen; John Hicks; Laura Tonachini; Massimiliano Monticone; Patrizio Castagnola; Frank Rauch; Francis H Glorieux; Janice Vranka; Hans Peter Bächinger; James M Pace; Ulrike Schwarze; Peter H Byers; MaryAnn Weis; Russell J Fernandes; David R Eyre; Zhenqiang Yao; Brendan F Boyce; Brendan Lee
Journal:  Cell       Date:  2006-10-20       Impact factor: 41.582

5.  Secretion and assembly of type IV and VI collagens depend on glycosylation of hydroxylysines.

Authors:  Laura Sipilä; Heli Ruotsalainen; Raija Sormunen; Naomi L Baker; Shireen R Lamandé; Miia Vapola; Chunguang Wang; Yoshikazu Sado; Attila Aszodi; Raili Myllylä
Journal:  J Biol Chem       Date:  2007-09-14       Impact factor: 5.157

6.  IL-17-dependent cellular immunity to collagen type V predisposes to obliterative bronchiolitis in human lung transplants.

Authors:  William J Burlingham; Robert B Love; Ewa Jankowska-Gan; Lynn D Haynes; Qingyong Xu; Joseph L Bobadilla; Keith C Meyer; Mary S Hayney; Ruedi K Braun; Daniel S Greenspan; Bagavathi Gopalakrishnan; Junchao Cai; David D Brand; Shigetoshi Yoshida; Oscar W Cummings; David S Wilkes
Journal:  J Clin Invest       Date:  2007-11       Impact factor: 14.808

7.  Characterization of recombinant human prolyl 3-hydroxylase isoenzyme 2, an enzyme modifying the basement membrane collagen IV.

Authors:  Päivi Tiainen; Annika Pasanen; Raija Sormunen; Johanna Myllyharju
Journal:  J Biol Chem       Date:  2008-05-15       Impact factor: 5.157

8.  Th-17, monokines, collagen type V, and primary graft dysfunction in lung transplantation.

Authors:  Joseph L Bobadilla; Robert B Love; Ewa Jankowska-Gan; Qingyong Xu; Lynn D Haynes; Ruedi K Braun; Mary S Hayney; Alejandro Munoz del Rio; Keith Meyer; Daniel S Greenspan; Jose Torrealba; Kathleen M Heidler; Oscar W Cummings; Takekazu Iwata; David Brand; Robert Presson; William J Burlingham; David S Wilkes
Journal:  Am J Respir Crit Care Med       Date:  2008-01-03       Impact factor: 21.405

9.  Anti-type V collagen humoral immunity in lung transplant primary graft dysfunction.

Authors:  Takekazu Iwata; Alexander Philipovskiy; Amanda J Fisher; Robert G Presson; Masako Chiyo; Jae Lee; Elizabeth Mickler; Gerald N Smith; Irina Petrache; David B Brand; William J Burlingham; Bagavathi Gopalakrishnan; Daniel S Greenspan; Jason D Christie; David S Wilkes
Journal:  J Immunol       Date:  2008-10-15       Impact factor: 5.422

10.  Cyanogen bromide peptides of the fibrillar collagens I, III, and V and their mass spectrometric characterization: detection of linear peptides, peptide glycosylation, and cross-linking peptides involved in formation of homo- and heterotypic fibrils.

Authors:  Werner Henkel; Klaus Dreisewerd
Journal:  J Proteome Res       Date:  2007-10-16       Impact factor: 4.466

View more
  22 in total

1.  Developmental Stage-dependent Regulation of Prolyl 3-Hydroxylation in Tendon Type I Collagen.

Authors:  Yuki Taga; Masashi Kusubata; Kiyoko Ogawa-Goto; Shunji Hattori
Journal:  J Biol Chem       Date:  2015-11-13       Impact factor: 5.157

2.  Large-Scale Differentiation and Site Specific Discrimination of Hydroxyproline Isomers by Electron Transfer/Higher-Energy Collision Dissociation (EThcD) Mass Spectrometry.

Authors:  Fengfei Ma; Ruixiang Sun; Daniel M Tremmel; Sara Dutton Sackett; Jon Odorico; Lingjun Li
Journal:  Anal Chem       Date:  2018-04-20       Impact factor: 6.986

3.  High-resolution mass spectrometry confirms the presence of a hydroxyproline (Hyp) post-translational modification in the GGGGP linker of an Fc-fusion protein.

Authors:  Chris Spahr; Kannan Gunasekaran; Kenneth W Walker; Stone D-H Shi
Journal:  MAbs       Date:  2017-05-16       Impact factor: 5.857

4.  Differential requirement for P2X7R function in IL-17 dependent vs. IL-17 independent cellular immune responses.

Authors:  J A Sullivan; E Jankowska-Gan; L Shi; D Roenneburg; S Hegde; D S Greenspan; D S Wilkes; L C Denlinger; W J Burlingham
Journal:  Am J Transplant       Date:  2014-05-27       Impact factor: 8.086

5.  Comprehensive Characterization of Glycosylation and Hydroxylation of Basement Membrane Collagen IV by High-Resolution Mass Spectrometry.

Authors:  Trayambak Basak; Lorenzo Vega-Montoto; Lisa J Zimmerman; David L Tabb; Billy G Hudson; Roberto M Vanacore
Journal:  J Proteome Res       Date:  2015-12-09       Impact factor: 4.466

Review 6.  Collagen prolyl 3-hydroxylation: a major role for a minor post-translational modification?

Authors:  David M Hudson; David R Eyre
Journal:  Connect Tissue Res       Date:  2013-06-21       Impact factor: 3.417

7.  LC-MS/MS identification of the O-glycosylation and hydroxylation of amino acid residues of collagen α-1 (II) chain from bovine cartilage.

Authors:  Ehwang Song; Yehia Mechref
Journal:  J Proteome Res       Date:  2013-07-23       Impact factor: 4.466

Review 8.  Bone collagen: new clues to its mineralization mechanism from recessive osteogenesis imperfecta.

Authors:  David R Eyre; Mary Ann Weis
Journal:  Calcif Tissue Int       Date:  2013-03-19       Impact factor: 4.333

9.  Autoimmune Reactivity in Graft Injury: Player or Bystander?

Authors:  Vrushali V Agashe; William J Burlingham
Journal:  Curr Transplant Rep       Date:  2015-07-07

10.  Unusual fragmentation pathways in collagen glycopeptides.

Authors:  Irina Perdivara; Lalith Perera; Marnisa Sricholpech; Masahiko Terajima; Nancy Pleshko; Mitsuo Yamauchi; Kenneth B Tomer
Journal:  J Am Soc Mass Spectrom       Date:  2013-04-30       Impact factor: 3.109

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.