Literature DB >> 23057747

LINE-1 retrotransposition in the nervous system.

Charles A Thomas1, Apuã C M Paquola, Alysson R Muotri.   

Abstract

Long interspersed element-1 (LINE-1 or L1) is a repetitive DNA retrotransposon capable of duplication by a copy-and-paste genetic mechanism. Scattered throughout mammalian genomes, L1 is typically quiescent in most somatic cell types. In developing neurons, however, L1 can express and retrotranspose at high frequency. The L1 element can insert into various genomic locations including intragenic regions. These insertions can alter the dynamic of the neuronal transcriptome by changing the expression pattern of several nearby genes. The consequences of L1 genomic alterations in somatic cells are still under investigation, but the high level of mutagenesis within neurons suggests that each neuron is genetically unique. Furthermore, some neurological diseases, such as Rett syndrome and ataxia telangiectasia, misregulate L1 retrotransposition, which could contribute to some pathological aspects. In this review, we survey the literature related to neurodevelopmental retrotransposition and discuss possible relevance to neuronal function, evolution, and neurological disease.

Entities:  

Mesh:

Year:  2012        PMID: 23057747     DOI: 10.1146/annurev-cellbio-101011-155822

Source DB:  PubMed          Journal:  Annu Rev Cell Dev Biol        ISSN: 1081-0706            Impact factor:   13.827


  42 in total

Review 1.  Post-transcriptional regulatory elements and spatiotemporal specification of neocortical stem cells and projection neurons.

Authors:  E M DeBoer; M L Kraushar; R P Hart; M-R Rasin
Journal:  Neuroscience       Date:  2013-05-30       Impact factor: 3.590

Review 2.  The role of transposable elements in health and diseases of the central nervous system.

Authors:  Matthew T Reilly; Geoffrey J Faulkner; Joshua Dubnau; Igor Ponomarev; Fred H Gage
Journal:  J Neurosci       Date:  2013-11-06       Impact factor: 6.167

3.  TEtranscripts: a package for including transposable elements in differential expression analysis of RNA-seq datasets.

Authors:  Ying Jin; Oliver H Tam; Eric Paniagua; Molly Hammell
Journal:  Bioinformatics       Date:  2015-07-23       Impact factor: 6.937

Review 4.  Somatizing the transposons action.

Authors:  Elgion L S Loreto; Camila Moura Pereira
Journal:  Mob Genet Elements       Date:  2017-04-13

Review 5.  Physiology of the read-write genome.

Authors:  James A Shapiro
Journal:  J Physiol       Date:  2014-06-01       Impact factor: 5.182

6.  Engrailed homeoprotein blocks degeneration in adult dopaminergic neurons through LINE-1 repression.

Authors:  François-Xavier Blaudin de Thé; Hocine Rekaik; Eugenie Peze-Heidsieck; Olivia Massiani-Beaudoin; Rajiv L Joshi; Julia Fuchs; Alain Prochiantz
Journal:  EMBO J       Date:  2018-06-25       Impact factor: 11.598

Review 7.  Living Organisms Author Their Read-Write Genomes in Evolution.

Authors:  James A Shapiro
Journal:  Biology (Basel)       Date:  2017-12-06

8.  Whole-genome sequencing reveals principles of brain retrotransposition in neurodevelopmental disorders.

Authors:  Jasmine Jacob-Hirsch; Eran Eyal; Binyamin A Knisbacher; Jonathan Roth; Karen Cesarkas; Chen Dor; Sarit Farage-Barhom; Vered Kunik; Amos J Simon; Moran Gal; Michal Yalon; Sharon Moshitch-Moshkovitz; Rick Tearle; Shlomi Constantini; Erez Y Levanon; Ninette Amariglio; Gideon Rechavi
Journal:  Cell Res       Date:  2018-01-12       Impact factor: 25.617

Review 9.  An expanding universe of the non-coding genome in cancer biology.

Authors:  Bin Xue; Lin He
Journal:  Carcinogenesis       Date:  2014-04-18       Impact factor: 4.944

10.  Evolution: life has evolved to evolve: comment on "How life changes itself: the Read-Write (RW) genome" by James Shapiro.

Authors:  Michael W Deem
Journal:  Phys Life Rev       Date:  2013-07-10       Impact factor: 11.025

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