Literature DB >> 23053987

Use of a bovine genome chip to identify new biological pathways for beef quality in cattle.

Liu Guifen1, Liu Xiaomu, Wan Fachun, Tan Xiuwen, Cheng Haijian, Song Enliang.   

Abstract

The accumulation of muscle is largely influenced by the genetic background of cattle. Muscle tissue was collected from the longissimus muscle of Lilu beef cattle at 12, 18, 24 and 30 months old. Using meat quality analysis, we found that the Lilu beef cattle have good production and slaughter performance, the performance meets the criterion of beef cattle. Microarray analysis was able to identify a total of 4,219 genes that are differentially expressed (P ≤ 0.01) between the two groups of cattle (12 vs 18; 18 vs 24; 24 vs 30). Bioinformatics analysis results suggested that most of the differentially expressed genes are involved in the metabolic pathways and neuroactive ligand-receptor interaction pathways. In the future study that aims to look for genes relating to growth and meat quality, we will focus on the genes that have been shown to have a significant variation between groups and are involved in the two pathways.

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Year:  2012        PMID: 23053987     DOI: 10.1007/s11033-012-1999-8

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  12 in total

1.  Intramuscular fat deposition in principal muscles from twenty-four to thirty months of age using identical twins of Japanese Black steers.

Authors:  T Okumura; K Saito; H Sakuma; T Nade; S Nakayama; K Fujita; T Kawamura
Journal:  J Anim Sci       Date:  2007-04-12       Impact factor: 3.159

2.  The transcriptional program of sporulation in budding yeast.

Authors:  S Chu; J DeRisi; M Eisen; J Mulholland; D Botstein; P O Brown; I Herskowitz
Journal:  Science       Date:  1998-10-23       Impact factor: 47.728

3.  Expression of HMGR and corresponding cholesterol content in tissues of two pig breeds.

Authors:  G-F Liu; W-N Fang; H-C Lin; X-F Wang; J-L Fu; A-G Wang
Journal:  Animal       Date:  2009-10       Impact factor: 3.240

4.  Microarray analysis of p-anisaldehyde-induced transcriptome of Saccharomyces cerevisiae.

Authors:  Lu Yu; Na Guo; Yi Yang; Xiuping Wu; Rizeng Meng; Junwen Fan; Fa Ge; Xuelin Wang; Jingbo Liu; Xuming Deng
Journal:  J Ind Microbiol Biotechnol       Date:  2009-12-19       Impact factor: 3.346

Review 5.  The structure of the catalytic portion of human HMG-CoA reductase.

Authors:  E S Istvan; J Deisenhofer
Journal:  Biochim Biophys Acta       Date:  2000-12-15

6.  Sirt1 promotes fat mobilization in white adipocytes by repressing PPAR-gamma.

Authors:  Frédéric Picard; Martin Kurtev; Namjin Chung; Acharawan Topark-Ngarm; Thanaset Senawong; Rita Machado De Oliveira; Mark Leid; Michael W McBurney; Leonard Guarente
Journal:  Nature       Date:  2004-06-02       Impact factor: 49.962

7.  Effect of simvastatin on culturing of kidney cells from pigs in vitro.

Authors:  Guifen Liu; Haichao Lin; Jinlian Fu; Aiguo Wang
Journal:  Mol Biol Rep       Date:  2009-04-03       Impact factor: 2.316

8.  Use of a bovine genome array to identify new biological pathways for beef marbling in Hanwoo (Korean Cattle).

Authors:  Seung-Hwan Lee; Cedric Gondro; Julius van der Werf; Nam-Kuk Kim; Da-Jeong Lim; Eung-Woo Park; Sung-Jong Oh; John P Gibson; John M Thompson
Journal:  BMC Genomics       Date:  2010-11-09       Impact factor: 3.969

9.  Evaluation of methods for oligonucleotide array data via quantitative real-time PCR.

Authors:  Li-Xuan Qin; Richard P Beyer; Francesca N Hudson; Nancy J Linford; Daryl E Morris; Kathleen F Kerr
Journal:  BMC Bioinformatics       Date:  2006-01-17       Impact factor: 3.169

10.  Discovery of novel genetic networks associated with 19 economically important traits in beef cattle.

Authors:  Zhihua Jiang; Jennifer J Michal; Jie Chen; Tyler F Daniels; Tanja Kunej; Matthew D Garcia; Charles T Gaskins; Jan R Busboom; Leeson J Alexander; Raymond W Wright; Michael D Macneil
Journal:  Int J Biol Sci       Date:  2009-07-29       Impact factor: 6.580

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