Literature DB >> 9784122

The transcriptional program of sporulation in budding yeast.

S Chu1, J DeRisi, M Eisen, J Mulholland, D Botstein, P O Brown, I Herskowitz.   

Abstract

Diploid cells of budding yeast produce haploid cells through the developmental program of sporulation, which consists of meiosis and spore morphogenesis. DNA microarrays containing nearly every yeast gene were used to assay changes in gene expression during sporulation. At least seven distinct temporal patterns of induction were observed. The transcription factor Ndt80 appeared to be important for induction of a large group of genes at the end of meiotic prophase. Consensus sequences known or proposed to be responsible for temporal regulation could be identified solely from analysis of sequences of coordinately expressed genes. The temporal expression pattern provided clues to potential functions of hundreds of previously uncharacterized genes, some of which have vertebrate homologs that may function during gametogenesis.

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Year:  1998        PMID: 9784122     DOI: 10.1126/science.282.5389.699

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  594 in total

1.  SCF ubiquitin protein ligases and phosphorylation-dependent proteolysis.

Authors:  A R Willems; T Goh; L Taylor; I Chernushevich; A Shevchenko; M Tyers
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-09-29       Impact factor: 6.237

Review 2.  Exploring expression data: identification and analysis of coexpressed genes.

Authors:  L J Heyer; S Kruglyak; S Yooseph
Journal:  Genome Res       Date:  1999-11       Impact factor: 9.043

3.  Assessing clusters and motifs from gene expression data.

Authors:  L M Jakt; L Cao; K S Cheah; D K Smith
Journal:  Genome Res       Date:  2001-01       Impact factor: 9.043

4.  Coupling of Saccharomyces cerevisiae early meiotic gene expression to DNA replication depends upon RPD3 and SIN3.

Authors:  T M Lamb; A P Mitchell
Journal:  Genetics       Date:  2001-02       Impact factor: 4.562

5.  Kaposi's sarcoma-associated herpesvirus latent and lytic gene expression as revealed by DNA arrays.

Authors:  R G Jenner; M M Albà; C Boshoff; P Kellam
Journal:  J Virol       Date:  2001-01       Impact factor: 5.103

6.  PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information.

Authors:  J Qian; B Stenger; C A Wilson; J Lin; R Jansen; S A Teichmann; J Park; W G Krebs; H Yu; V Alexandrov; N Echols; M Gerstein
Journal:  Nucleic Acids Res       Date:  2001-04-15       Impact factor: 16.971

7.  Discovering regulatory elements in non-coding sequences by analysis of spaced dyads.

Authors:  J van Helden; A F Rios; J Collado-Vides
Journal:  Nucleic Acids Res       Date:  2000-04-15       Impact factor: 16.971

8.  Analysis of the yeast transcriptome with structural and functional categories: characterizing highly expressed proteins.

Authors:  R Jansen; M Gerstein
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

9.  Knowledge-based analysis of microarray gene expression data by using support vector machines.

Authors:  M P Brown; W N Grundy; D Lin; N Cristianini; C W Sugnet; T S Furey; M Ares; D Haussler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

10.  Rapamycin-modulated transcription defines the subset of nutrient-sensitive signaling pathways directly controlled by the Tor proteins.

Authors:  J S Hardwick; F G Kuruvilla; J K Tong; A F Shamji; S L Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

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