Literature DB >> 23051691

A decade of seasonal dynamics and co-occurrences within freshwater bacterioplankton communities from eutrophic Lake Mendota, WI, USA.

Emily L Kara1, Paul C Hanson, Yu Hen Hu, Luke Winslow, Katherine D McMahon.   

Abstract

With an unprecedented decade-long time series from a temperate eutrophic lake, we analyzed bacterial and environmental co-occurrence networks to gain insight into seasonal dynamics at the community level. We found that (1) bacterial co-occurrence networks were non-random, (2) season explained the network complexity and (3) co-occurrence network complexity was negatively correlated with the underlying community diversity across different seasons. Network complexity was not related to the variance of associated environmental factors. Temperature and productivity may drive changes in diversity across seasons in temperate aquatic systems, much as they control diversity across latitude. While the implications of bacterioplankton network structure on ecosystem function are still largely unknown, network analysis, in conjunction with traditional multivariate techniques, continues to increase our understanding of bacterioplankton temporal dynamics.

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Year:  2012        PMID: 23051691      PMCID: PMC3578560          DOI: 10.1038/ismej.2012.118

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  16 in total

Review 1.  The diversity-stability debate.

Authors:  K S McCann
Journal:  Nature       Date:  2000-05-11       Impact factor: 49.962

2.  Dormancy contributes to the maintenance of microbial diversity.

Authors:  Stuart E Jones; Jay T Lennon
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

3.  Annually reoccurring bacterial communities are predictable from ocean conditions.

Authors:  Jed A Fuhrman; Ian Hewson; Michael S Schwalbach; Joshua A Steele; Mark V Brown; Shahid Naeem
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-22       Impact factor: 11.205

4.  High predictability of the seasonal dynamics of a species-like Polynucleobacter population in a freshwater lake.

Authors:  Qinglong L Wu; Martin W Hahn
Journal:  Environ Microbiol       Date:  2006-09       Impact factor: 5.491

5.  Synchrony in aquatic microbial community dynamics.

Authors:  Angela D Kent; Anthony C Yannarell; James A Rusak; Eric W Triplett; Katherine D McMahon
Journal:  ISME J       Date:  2007-05       Impact factor: 10.302

6.  Global patterns of diversity and community structure in marine bacterioplankton.

Authors:  T Pommier; B Canbäck; L Riemann; K H Boström; K Simu; P Lundberg; A Tunlid; A Hagström
Journal:  Mol Ecol       Date:  2007-02       Impact factor: 6.185

7.  Seasonal variations of phage life strategies and bacterial physiological states in three northern temperate lakes.

Authors:  C F Maurice; T Bouvier; J Comte; F Guillemette; P A Del Giorgio
Journal:  Environ Microbiol       Date:  2009-11-25       Impact factor: 5.491

8.  A latitudinal diversity gradient in planktonic marine bacteria.

Authors:  Jed A Fuhrman; Joshua A Steele; Ian Hewson; Michael S Schwalbach; Mark V Brown; Jessica L Green; James H Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-28       Impact factor: 11.205

Review 9.  Microbial seed banks: the ecological and evolutionary implications of dormancy.

Authors:  Jay T Lennon; Stuart E Jones
Journal:  Nat Rev Microbiol       Date:  2011-02       Impact factor: 60.633

10.  The Western English Channel contains a persistent microbial seed bank.

Authors:  J Gregory Caporaso; Konrad Paszkiewicz; Dawn Field; Rob Knight; Jack A Gilbert
Journal:  ISME J       Date:  2011-11-10       Impact factor: 10.302

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  34 in total

1.  Cross-depth analysis of marine bacterial networks suggests downward propagation of temporal changes.

Authors:  Jacob A Cram; Li C Xia; David M Needham; Rohan Sachdeva; Fengzhu Sun; Jed A Fuhrman
Journal:  ISME J       Date:  2015-05-19       Impact factor: 10.302

2.  Resistant microbial cooccurrence patterns inferred by network topology.

Authors:  Sari Peura; Stefan Bertilsson; Roger I Jones; Alexander Eiler
Journal:  Appl Environ Microbiol       Date:  2015-01-09       Impact factor: 4.792

Review 3.  Marine microbial community dynamics and their ecological interpretation.

Authors:  Jed A Fuhrman; Jacob A Cram; David M Needham
Journal:  Nat Rev Microbiol       Date:  2015-02-09       Impact factor: 60.633

4.  How are species interactions structured in species-rich communities? A new method for analysing time-series data.

Authors:  Otso Ovaskainen; Gleb Tikhonov; David Dunson; Vidar Grøtan; Steinar Engen; Bernt-Erik Sæther; Nerea Abrego
Journal:  Proc Biol Sci       Date:  2017-05-31       Impact factor: 5.349

5.  Characterising and predicting cyanobacterial blooms in an 8-year amplicon sequencing time course.

Authors:  Nicolas Tromas; Nathalie Fortin; Larbi Bedrani; Yves Terrat; Pedro Cardoso; David Bird; Charles W Greer; B Jesse Shapiro
Journal:  ISME J       Date:  2017-05-19       Impact factor: 10.302

6.  Urban wastewater bacterial communities assemble into seasonal steady states.

Authors:  Emily Lou LaMartina; Aurash A Mohaimani; Ryan J Newton
Journal:  Microbiome       Date:  2021-05-20       Impact factor: 14.650

7.  Diversity and Cyclical Seasonal Transitions in the Bacterial Community in a Large and Deep Perialpine Lake.

Authors:  Nico Salmaso; Davide Albanese; Camilla Capelli; Adriano Boscaini; Massimo Pindo; Claudio Donati
Journal:  Microb Ecol       Date:  2017-12-01       Impact factor: 4.552

8.  Uptake of Phytoplankton-Derived Carbon and Cobalamins by Novel Acidobacteria Genera in Microcystis Blooms Inferred from Metagenomic and Metatranscriptomic Evidence.

Authors:  Derek J Smith; Jenan J Kharbush; Roland D Kersten; Gregory J Dick
Journal:  Appl Environ Microbiol       Date:  2022-07-05       Impact factor: 5.005

9.  The Seasonal Patterns, Ecological Function and Assembly Processes of Bacterioplankton Communities in the Danjiangkou Reservoir, China.

Authors:  Zhao-Jin Chen; Yong-Qi Liu; Yu-Ying Li; Li-An Lin; Bao-Hai Zheng; Ming-Fei Ji; B Larry Li; Xue-Mei Han
Journal:  Front Microbiol       Date:  2022-06-15       Impact factor: 6.064

10.  Ecological insights into assembly processes and network structures of bacterial biofilms in full-scale biologically active carbon filters under ozone implementation.

Authors:  Lei Li; Daliang Ning; Youchul Jeon; Hodon Ryu; Jorge W Santo Domingo; Dae-Wook Kang; Anusha Kadudula; Youngwoo Seo
Journal:  Sci Total Environ       Date:  2020-08-08       Impact factor: 7.963

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