Literature DB >> 23051662

High-performance binary protein interaction screening in a microfluidic format.

Matthias Meier1, Rene Sit, Wenying Pan, Stephen R Quake.   

Abstract

The standard procedure to increase microfluidic chip performance is to grow the number of parallel test systems on the chip. This process is accompanied by miniaturizing biochemical workflows and micromechanical elements, which is often a major challenge for both engineering fields. In this work, we show that it is possible to substantially increase the runtime performance of a microfluidic affinity assay for protein interactions by simultaneously engineering fluid logics and assay chemistry. For this, synergistic effects between the micro- and chemical architecture of the chip are exploited. The presented strategy of reducing the runtime rather than size and volume of the mechanical elements and biological reagent compartments will, in general, be of importance for future analytical test systems on microfluidic chips to overcome performance barriers.

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Year:  2012        PMID: 23051662      PMCID: PMC3533494          DOI: 10.1021/ac302436y

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  15 in total

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Journal:  Phys Rev Lett       Date:  2001-04-30       Impact factor: 9.161

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3.  Microfluidic vias enable nested bioarrays and autoregulatory devices in Newtonian fluids.

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4.  A systems approach to measuring the binding energy landscapes of transcription factors.

Authors:  Sebastian J Maerkl; Stephen R Quake
Journal:  Science       Date:  2007-01-12       Impact factor: 47.728

5.  A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization.

Authors:  D Shalon; S J Smith; P O Brown
Journal:  Genome Res       Date:  1996-07       Impact factor: 9.043

6.  Digital PCR on a SlipChip.

Authors:  Feng Shen; Wenbin Du; Jason E Kreutz; Alice Fok; Rustem F Ismagilov
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7.  A novel calcium-sensitive switch revealed by the structure of human S100B in the calcium-bound form.

Authors:  S P Smith; G S Shaw
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8.  An in vitro microfluidic approach to generating protein-interaction networks.

Authors:  Doron Gerber; Sebastian J Maerkl; Stephen R Quake
Journal:  Nat Methods       Date:  2008-12-21       Impact factor: 28.547

9.  Demonstration of heterodimer formation between S100B and S100A6 in the yeast two-hybrid system and human melanoma.

Authors:  Q Yang; D O'Hanlon; C W Heizmann; A Marks
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10.  De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis.

Authors:  Polly M Fordyce; Doron Gerber; Danh Tran; Jiashun Zheng; Hao Li; Joseph L DeRisi; Stephen R Quake
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  6 in total

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Authors:  Aaron M Streets; Yanyi Huang
Journal:  Biomicrofluidics       Date:  2013-01-31       Impact factor: 2.800

5.  An off-the-shelf integrated microfluidic device comprising self-assembled monolayers for protein array experiments.

Authors:  Mirit Hen; Maria Ronen; Alex Deitch; Efrat Barbiro-Michaely; Ziv Oren; Chaim N Sukenik; Doron Gerber
Journal:  Biomicrofluidics       Date:  2015-09-16       Impact factor: 2.800

6.  Systematic reconstruction of binding and stability landscapes of the fluorogenic aptamer spinach.

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Journal:  Nucleic Acids Res       Date:  2015-09-22       Impact factor: 16.971

  6 in total

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