Literature DB >> 23050654

Temperature invariance of the nitrogenase electron transfer mechanism.

Diana Mayweather1, Karamatullah Danyal, Dennis R Dean, Lance C Seefeldt, Brian M Hoffman.   

Abstract

Earlier studies of electron transfer (ET) from the nitrogenase Fe protein to the MoFe protein concluded that the mechanism for ET changed during cooling from 25 to 5 °C, based on the observation that the rate constant for Fe protein to MoFe protein ET decreases strongly, with a nonlinear Arrhenius plot. They further indicated that the ET was reversible, with complete ET at ambient temperature but with an equilibrium constant near unity at 5 °C. These studies were conducted with buffers having a strong temperature coefficient. We have examined the temperature variation in the kinetics of oxidation of the Fe protein by the MoFe protein at a constant pH of 7.4 fixed by the buffer 3-(N-morpholino)propanesulfonic acid (MOPS), which has a very small temperature coefficient. Using MOPS, we also observe temperature-dependent ET rate constants, with nonlinear Arrhenius plots, but we find that ET is gated across the temperature range by a conformational change that involves the binding of numerous water molecules, consistent with an unchanging ET mechanism. Furthermore, there is no solvent kinetic isotope effect throughout the temperature range studied, again consistent with an unchanging mechanism. In addition, the nonlinear Arrhenius plots are explained by the change in heat capacity caused by the binding of waters in an invariant gating ET mechanism. Together, these observations contradict the idea of a change in ET mechanism with cooling. Finally, the extent of ET at constant pH does not change significantly with temperature, in contrast to the previously proposed change in ET equilibrium.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23050654      PMCID: PMC3487593          DOI: 10.1021/bi301164j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

1.  Duplication and extension of the Thorneley and Lowe kinetic model for Klebsiella pneumoniae nitrogenase catalysis using a MATHEMATICA software platform.

Authors:  P E Wilson; A C Nyborg; G D Watt
Journal:  Biophys Chem       Date:  2001-07-24       Impact factor: 2.352

2.  Mechanism of Molybdenum Nitrogenase.

Authors:  Barbara K. Burgess; David J. Lowe
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

3.  Temperature effects on the MgATP-induced electron transfer between the nitrogenase proteins from Azotobacter vinelandii.

Authors:  R E Mensink; H Haaker
Journal:  Eur J Biochem       Date:  1992-09-01

4.  Surface residues dynamically organize water bridges to enhance electron transfer between proteins.

Authors:  Aurélien de la Lande; Nathan S Babcock; Jan Rezác; Barry C Sanders; Dennis R Salahub
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-14       Impact factor: 11.205

5.  Macromolecules and water: probing with osmotic stress.

Authors:  V A Parsegian; R P Rand; D C Rau
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

6.  Catalytic and biophysical properties of a nitrogenase Apo-MoFe protein produced by a nifB-deletion mutant of Azotobacter vinelandii.

Authors:  J Christiansen; P J Goodwin; W N Lanzilotta; L C Seefeldt; D R Dean
Journal:  Biochemistry       Date:  1998-09-08       Impact factor: 3.162

7.  Evidence for electron transfer from the nitrogenase iron protein to the molybdenum-iron protein without MgATP hydrolysis: characterization of a tight protein-protein complex.

Authors:  W N Lanzilotta; K Fisher; L C Seefeldt
Journal:  Biochemistry       Date:  1996-06-04       Impact factor: 3.162

8.  Nitrogenase complexes: multiple docking sites for a nucleotide switch protein.

Authors:  F Akif Tezcan; Jens T Kaiser; Debarshi Mustafi; Mika Y Walton; James B Howard; Douglas C Rees
Journal:  Science       Date:  2005-08-26       Impact factor: 47.728

9.  Electron transfer in nitrogenase analyzed by Marcus theory: evidence for gating by MgATP.

Authors:  W N Lanzilotta; V D Parker; L C Seefeldt
Journal:  Biochemistry       Date:  1998-01-06       Impact factor: 3.162

10.  Interfacial hydration, dynamics and electron transfer: multi-scale ET modeling of the transient [myoglobin, cytochrome b5] complex.

Authors:  Shahar Keinan; Judith M Nocek; Brian M Hoffman; David N Beratan
Journal:  Phys Chem Chem Phys       Date:  2012-09-07       Impact factor: 3.676

View more
  5 in total

1.  Exploring Electron/Proton Transfer and Conformational Changes in the Nitrogenase MoFe Protein and FeMo-cofactor Through Cryoreduction/EPR Measurements.

Authors:  Roman Davydov; Nimesh Khadka; Zhi-Yong Yang; Andrew J Fielding; Dmitriy Lukoyanov; Dennis R Dean; Lance C Seefeldt; Brian M Hoffman
Journal:  Isr J Chem       Date:  2016-07-29       Impact factor: 3.333

2.  Mechanism of Nitrogenase H2 Formation by Metal-Hydride Protonation Probed by Mediated Electrocatalysis and H/D Isotope Effects.

Authors:  Nimesh Khadka; Ross D Milton; Sudipta Shaw; Dmitriy Lukoyanov; Dennis R Dean; Shelley D Minteer; Simone Raugei; Brian M Hoffman; Lance C Seefeldt
Journal:  J Am Chem Soc       Date:  2017-09-15       Impact factor: 15.419

Review 3.  Nitrogenase reduction of carbon-containing compounds.

Authors:  Lance C Seefeldt; Zhi-Yong Yang; Simon Duval; Dennis R Dean
Journal:  Biochim Biophys Acta       Date:  2013-04-16

4.  Low frequency dynamics of the nitrogenase MoFe protein via femtosecond pump probe spectroscopy - Observation of a candidate promoting vibration.

Authors:  Margherita Maiuri; Ines Delfino; Giulio Cerullo; Cristian Manzoni; Vladimir Pelmenschikov; Yisong Guo; Hongxin Wang; Leland B Gee; Christie H Dapper; William E Newton; Stephen P Cramer
Journal:  J Inorg Biochem       Date:  2015-07-14       Impact factor: 4.155

Review 5.  Mechanism of nitrogen fixation by nitrogenase: the next stage.

Authors:  Brian M Hoffman; Dmitriy Lukoyanov; Zhi-Yong Yang; Dennis R Dean; Lance C Seefeldt
Journal:  Chem Rev       Date:  2014-01-27       Impact factor: 60.622

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.