| Literature DB >> 23049555 |
Arunima Ghosh1, Andy Vo, Beverly K Twiss, Colin A Kretz, Mary A Jozwiak, Robert R Montgomery, Jordan A Shavit.
Abstract
von Willebrand disease (VWD) is the most common inherited human bleeding disorder and is caused by quantitative or qualitative defects in von Willebrand factor (VWF). VWF is a secreted glycoprotein that circulates as large multimers. While reduced VWF is associated with bleeding, elevations in overall level or multimer size are implicated in thrombosis. The zebrafish is a powerful genetic model in which the hemostatic system is well conserved with mammals. The ability of this organism to generate thousands of offspring and its optical transparency make it unique and complementary to mammalian models of hemostasis. Previously, partial clones of zebrafish vwf have been identified, and some functional conservation has been demonstrated. In this paper we clone the complete zebrafish vwf cDNA and show that there is conservation of domain structure. Recombinant zebrafish Vwf forms large multimers and pseudo-Weibel-Palade bodies (WPBs) in cell culture. Larval expression is in the pharyngeal arches, yolk sac, and intestinal epithelium. These results provide a foundation for continued study of zebrafish Vwf that may further our understanding of the mechanisms of VWD.Entities:
Year: 2012 PMID: 23049555 PMCID: PMC3462383 DOI: 10.1155/2012/214209
Source DB: PubMed Journal: Adv Hematol
List of primers and sequences.
| Reference number | Sequence | Description |
|---|---|---|
| 92 | AGTCGGCAGCACATACACAC |
|
| 93 | ATCCGGACAGGTCAGTTCAC |
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| 94 | CCTGCAGCTTAAACCCAAAG |
|
| 95 | AAAGCTTCATCGTCCAGCTC |
|
| 96 | CTGTTGACGGCAAGTGCTAA |
|
| 97 | TCTCCTGATGCTGGACACAC |
|
| 98 | GACGGCAGTGTAACGACAGA |
|
| 99 | CCTGCAAGAGAGCCGATAAC |
|
| 116 | TGCGTGCTGAATCAAACTGT |
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| 128 | AGTCGCCAGGGAATTCATAA |
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| 130 | TTTGATTGACATTTTTATTTATTGTAGTTTA |
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| 543 | gatttaggtgacactatagCGACATGCAAGTGCAGAAGT | 424 bp |
| 544 | taatacgactcactatagggGCTGGGTTTTGCTGTAGGAG | 424 bp |
| 545 | gatttaggtgacactatagGGAGTTATCGGCTCTCTTGC | 441 bp |
| 546 | taatacgactcactatagggACACAGACTTGCTGCCACAC | 441 bp |
| CTCGAGAGAATTCCACCACACTGGACTAGTGGATC | XhoI-PmeI human VWF linker sequence (includes Myc/HIS tag) | |
| CGAGCTCGGTACCAAGCTTGGGCCCGAACAAAAAC | ||
| TCATCTCAGAAGAGGATCTGAATAGCGCCGTCGAC | ||
| CATCATCATCATCATCATTGAGTTTAAAC |
Human/zebrafish Vwf domain conservation.
| Domain | Identities | Positives | Human | zebrafish |
|---|---|---|---|---|
| (%) | (%) | length | length | |
| D1 | 51 | 70 | 352 | 351 |
| D2 | 64 | 79 | 360 | 359 |
| D′ | 51 | 71 | 90 | 88 |
| D3 | 56 | 69 | 376 | 370 |
| A1 | 36 | 57 | 220 | 233 |
| A2 | 28 | 56 | 193 | 193 |
| A3 | 42 | 58 | 202 | 207 |
| D4 | 39 | 54 | 372 | 382 |
| B1 | 58 | 73 | 35 | 34 |
| B2 | 52 | 64 | 26 | 30 |
| B3 | 67 | 83 | 25 | 25 |
| C1 | 50 | 58 | 116 | 107 |
| C2 | 48 | 63 | 119 | 117 |
| CK | 42 | 64 | 90 | 91 |
|
| ||||
| Total | 46 | 62 | 2813 | 2812 |
Alignment of human and zebrafish amino acid sequences using BLAST (http://blast.ncbi.nlm.nih.gov/ ). Percentage identity represents exact amino acid matches, while positives indicate conserved substitutions. Domain length is in amino acids.
Figure 1Domain organization of human VWF and multispecies alignment of the VWF propeptide and ADAMTS13 cleavage sites and flanking sequences. Sequence alignment was performed using ClustalW2 followed by output using BOXSHADE (Section 2). (a) Domain organization of human VWF. Upper notations indicate known protein-protein interaction domains (Gp: glycoprotein). The solid triangle indicates the propeptide (PP) cleavage site, and the open triangle indicates the ADAMTS13 cleavage site. “B” indicates domains B1–B3. (b) Alignment of sequences surrounding the Arg-Ser (RS, indicated by the solid triangle) human propeptide cleavage site demonstrates a high degree of conservation. Note the extended RX(R/K)R motif present in all species except for medaka. The open triangle indicates the presence of an unconserved cysteine in medaka Vwf. (c) Alignment at the human ADAMTS13 cleavage site (YM, indicated by the solid triangle) and flanking sequences demonstrates conservation of the Tyr-Met residues in mammalian and avian species, but a Phe-Leu putative site in teleost fish. The invariant Leu (human residue 1603) is indicated by a white triangle. z: zebrafish; h: human; m: mouse; ca: canine; c: chicken; fu: fugu; st: stickleback; med: medaka.
Figure 2Multimerization of zebrafish Vwf in mammalian cell culture demonstrates high molecular weight multimers similar to human VWF. HEK293T cells were transfected with pzVwf/V5-HISA, expressing V5-HIS tagged zebrafish Vwf (zVwf), or pCineoVWF, expressing untagged human VWF (hVWF). Normal human plasma (NHP) and zebrafish and human supernatants were separated by agarose gel electrophoresis, transferred by western blotting, and detected with either a pool of monoclonal anti-hVWF antibodies (Avw1, 5, 15, left panel) or a mixture of anti-V5 and anti-HIS antibodies (for tagged zVwf, right panel). The anti-V5/HIS combination detects zVwf with a multimer pattern, including high molecular weight multimers, indistinguishable from that typically observed for human VWF (brackets indicate high molecular weight multimers for both zebrafish and human VWF).
Figure 3Zebrafish Vwf forms pseudo-Weibel-Palade bodies (pseudo-WPBs) in mammalian cell culture. pVWF/Myc-HIS (human VWF, (a–c)) or pzVwf/Myc-HIS (zebrafish Vwf, (d–i)) plasmids were transfected into HEK293T cells. Anti-Myc antibody conjugated to Alexa Fluor 488 (green channel, (a, d, g)) was used for detection and anti-calnexin antibody conjugated to Alexa Fluor 594 (red channel, (b, e, h)) labeled endoplasmic reticulum (ER). Both constructs demonstrate formation of elongated Myc positive and ER negative structures (absence of yellow signal in the merged panels, (c, f, i)) characteristic of pseudo-WPBs (examples are indicated in (a, d), and (g) by arrowheads). Scale bars, 2.5 μm.
Figure 4Developmental expression of vwf mRNA. Wild type zebrafish offspring were isolated from 8 to 120 hpf, fixed, and in situ hybridization was performed (Section 2). (a) Examination at 8 hpf demonstrates weak expression throughout the entire embryo, and staining was completely absent from a sense control. (b) Diffuse expression continues at 12 hpf (staining was completely absent from a sense control), followed by more restricted expression cranially with a stripe that extends caudally at 48 hpf (c). Figure 4(d) is a sense probe as negative control at 48 hpf. (e) 96 hpf shows strong expression in the pharyngeal arches. (f) RT-PCR of cDNA isolated from whole zebrafish embryos and larvae from 8–96 hpf. (g, h) Analysis at 120 hpf shows continued expression in the pharyngeal arches, as well as inner yolk sac layer and intestinal epithelium. Experiments in (a–e) used full length vwf riboprobes. Results in (g, h) are representative of hybridization with exon 28 and exon 47–52 riboprobes (Section 2, Table 1). Abbreviations: p: pharyngeal arches; y: inner layer of yolk sac; i: intestinal epithelium.