Literature DB >> 23045497

Genome sequence of Pseudomonas putida S12, a potential platform strain for industrial production of valuable chemicals.

Fei Tao1, Yaling Shen, Ziqi Fan, Hongzhi Tang, Ping Xu.   

Abstract

Pseudomonas putida strain S12, a well-studied solvent-tolerant bacterium, is considered a platform strain for the production of many chemicals. Here, we present a 6.28-Mb assembly of its genome sequence. We have annotated 32 coding sequences (CDSs) encoding efflux systems of organic compounds and 195 CDSs responsible for the metabolism of aromatic compounds.

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Year:  2012        PMID： 23045497      PMCID： PMC3486094          DOI： 10.1128/JB.01482-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  21 in total

Review 1.  Industrial biocatalysis today and tomorrow.

Authors:  A Schmid; J S Dordick; B Hauer; A Kiener; M Wubbolts; B Witholt
Journal:  Nature       Date:  2001-01-11       Impact factor: 49.962

2.  Genome sequence of Pseudomonas putida Idaho, a unique organic-solvent-tolerant bacterium.

Authors:  Fei Tao; Hongzhi Tang; Zhonghui Gai; Fei Su; Xiaoyu Wang; Xiaofei He; Ping Xu
Journal:  J Bacteriol       Date:  2011-12       Impact factor: 3.490

Review 3.  Industrial biotechnology for the production of bio-based chemicals--a cradle-to-grave perspective.

Authors:  Rajni Hatti-Kaul; Ulrika Törnvall; Linda Gustafsson; Pål Börjesson
Journal:  Trends Biotechnol       Date:  2007-01-17       Impact factor: 19.536

Review 4.  Bacteria tolerant to organic solvents.

Authors:  S Isken; J A de Bont
Journal:  Extremophiles       Date:  1998-08       Impact factor: 2.395

5.  Towards a biocatalyst for (S)-styrene oxide production: characterization of the styrene degradation pathway of Pseudomonas sp. strain VLB120.

Authors:  S Panke; B Witholt; A Schmid; M G Wubbolts
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

6.  Biodesulfurization in biphasic systems containing organic solvents.

Authors:  Fei Tao; Bo Yu; Ping Xu; Cui Qing Ma
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

7.  Engineering of solvent-tolerant Pseudomonas putida S12 for bioproduction of phenol from glucose.

Authors:  Nick J P Wierckx; Hendrik Ballerstedt; Jan A M de Bont; Jan Wery
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

8.  Identification and molecular characterization of an efflux pump involved in Pseudomonas putida S12 solvent tolerance.

Authors:  J Kieboom; J J Dennis; J A de Bont; G J Zylstra
Journal:  J Biol Chem       Date:  1998-01-02       Impact factor: 5.157

9.  The solvent-tolerant Pseudomonas putida S12 as host for the production of cinnamic acid from glucose.

Authors:  Karin Nijkamp; Nicole van Luijk; Jan A M de Bont; Jan Wery
Journal:  Appl Microbiol Biotechnol       Date:  2005-11-12       Impact factor: 4.813

10.  Bacterial degradation of styrene involving a novel flavin adenine dinucleotide-dependent styrene monooxygenase.

Authors:  S Hartmans; M J van der Werf; J A de Bont
Journal:  Appl Environ Microbiol       Date:  1990-05       Impact factor: 4.792
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  3 in total

1.  Iron Uptake Analysis in a Set of Clinical Isolates of Pseudomonas putida.

Authors:  Lázaro Molina; Valérie A Geoffroy; Ana Segura; Zulema Udaondo; Juan-Luis Ramos
Journal:  Front Microbiol       Date:  2016-12-27       Impact factor: 5.640

2.  Green conversion of 5-hydroxymethylfurfural to furan-2,5-dicarboxylic acid by heterogeneous expression of 5-hydroxymethylfurfural oxidase in Pseudomonas putida S12.

Authors:  Chih-Ting Hsu; Yang-Cheng Kuo; Yu-Cheng Liu; Shen-Long Tsai
Journal:  Microb Biotechnol       Date:  2020-03-31       Impact factor: 5.813

3.  Hierarchical routing in carbon metabolism favors iron-scavenging strategy in iron-deficient soil Pseudomonas species.

Authors:  Caroll M Mendonca; Sho Yoshitake; Hua Wei; Anne Werner; Samantha S Sasnow; Theodore W Thannhauser; Ludmilla Aristilde
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-03       Impact factor: 12.779
  3 in total

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