Literature DB >> 23039587

Comparison of some dispersion-corrected and traditional functionals with CCSD(T) and MP2 ab initio methods: dispersion, induction, and basis set superposition error.

Dipankar Roy1, Mateusz Marianski, Neepa T Maitra, J J Dannenberg.   

Abstract

We compare dispersion and induction interactions for noble gas dimers and for Ne, methane, and 2-butyne with HF and LiF using a variety of functionals (including some specifically parameterized to evaluate dispersion interactions) with ab initio methods including CCSD(T) and MP2. We see that inductive interactions tend to enhance dispersion and may be accompanied by charge-transfer. We show that the functionals do not generally follow the expected trends in interaction energies, basis set superposition errors (BSSE), and interaction distances as a function of basis set size. The functionals parameterized to treat dispersion interactions often overestimate these interactions, sometimes by quite a lot, when compared to higher level calculations. Which functionals work best depends upon the examples chosen. The B3LYP and X3LYP functionals, which do not describe pure dispersion interactions, appear to describe dispersion mixed with induction about as accurately as those parametrized to treat dispersion. We observed significant differences in high-level wavefunction calculations in a basis set larger than those used to generate the structures in many of the databases. We discuss the implications for highly parameterized functionals based on these databases, as well as the use of simple potential energy for fitting the parameters rather than experimentally determinable thermodynamic state functions that involve consideration of vibrational states.

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Year:  2012        PMID: 23039587      PMCID: PMC3477180          DOI: 10.1063/1.4755990

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  41 in total

1.  Efficient and Accurate Double-Hybrid-Meta-GGA Density Functionals-Evaluation with the Extended GMTKN30 Database for General Main Group Thermochemistry, Kinetics, and Noncovalent Interactions.

Authors:  Lars Goerigk; Stefan Grimme
Journal:  J Chem Theory Comput       Date:  2010-12-23       Impact factor: 6.006

2.  Design of density functionals that are broadly accurate for thermochemistry, thermochemical kinetics, and nonbonded interactions.

Authors:  Yan Zhao; Donald G Truhlar
Journal:  J Phys Chem A       Date:  2005-06-30       Impact factor: 2.781

3.  Density functional theory augmented with an empirical dispersion term. Interaction energies and geometries of 80 noncovalent complexes compared with ab initio quantum mechanics calculations.

Authors:  Petr Jurecka; Jirí Cerný; Pavel Hobza; Dennis R Salahub
Journal:  J Comput Chem       Date:  2007-01-30       Impact factor: 3.376

4.  High-accuracy quantum mechanical studies of pi-pi interactions in benzene dimers.

Authors:  Mutasem Omar Sinnokrot; C David Sherrill
Journal:  J Phys Chem A       Date:  2006-09-21       Impact factor: 2.781

5.  Accurate molecular van der Waals interactions from ground-state electron density and free-atom reference data.

Authors:  Alexandre Tkatchenko; Matthias Scheffler
Journal:  Phys Rev Lett       Date:  2009-02-20       Impact factor: 9.161

6.  Oscillations in meta-generalized-gradient approximation potential energy surfaces for dispersion-bound complexes.

Authors:  Erin R Johnson; Axel D Becke; C David Sherrill; Gino A DiLabio
Journal:  J Chem Phys       Date:  2009-07-21       Impact factor: 3.488

7.  A thorough benchmark of density functional methods for general main group thermochemistry, kinetics, and noncovalent interactions.

Authors:  Lars Goerigk; Stefan Grimme
Journal:  Phys Chem Chem Phys       Date:  2011-03-07       Impact factor: 3.676

8.  A reinvestigation of the dimer of para-benzoquinone and pyrimidine with MP2, CCSD(T), and DFT using functionals including those designed to describe dispersion.

Authors:  Mateusz Marianski; Antoni Oliva; J J Dannenberg
Journal:  J Phys Chem A       Date:  2012-07-19       Impact factor: 2.781

9.  On the importance of electron correlation effects for the intramolecular stacking geometry of a bis-thiophene derivative.

Authors:  Kristýna Pluhácková; Stefan Grimme; Pavel Hobza
Journal:  J Phys Chem A       Date:  2008-12-04       Impact factor: 2.781

10.  Evaluation of range-separated hybrid density functionals for the prediction of vibrational frequencies, infrared intensities, and Raman activities.

Authors:  Carlos A Jiménez-Hoyos; Benjamin G Janesko; Gustavo E Scuseria
Journal:  Phys Chem Chem Phys       Date:  2008-10-01       Impact factor: 3.676

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  7 in total

1.  Comparison of some dispersion-corrected and traditional functionals as applied to peptides and conformations of cyclohexane derivatives.

Authors:  Mateusz Marianski; Amparo Asensio; J J Dannenberg
Journal:  J Chem Phys       Date:  2012-07-28       Impact factor: 3.488

2.  Testing the CP-correction procedure with different DFT methods on H-bonding complexes of κ-carrabiose with water molecules.

Authors:  Rachida Fodil; Majda Sekkal-Rahal; Adlane Sayede
Journal:  J Mol Model       Date:  2017-01-14       Impact factor: 1.810

3.  The interactions of phenylalanines in β-sheet-like structures from molecular orbital calculations using density functional theory (DFT), MP2, and CCSD(T) methods.

Authors:  Gabor Pohl; Joshua A Plumley; J J Dannenberg
Journal:  J Chem Phys       Date:  2013-06-28       Impact factor: 3.488

4.  The folding of acetyl(Ala)28NH2 and acetyl(Ala)40NH2 extended strand peptides into antiparallel β-sheets. A density functional theory study of β-sheets with β-turns.

Authors:  Jorge Ali-Torres; J J Dannenberg
Journal:  J Phys Chem B       Date:  2012-11-27       Impact factor: 2.991

5.  Exploring Strong Interactions in Proteins with Quantum Chemistry and Examples of Their Applications in Drug Design.

Authors:  Neng-Zhong Xie; Qi-Shi Du; Jian-Xiu Li; Ri-Bo Huang
Journal:  PLoS One       Date:  2015-09-04       Impact factor: 3.240

6.  Capping parallel β-sheets of acetyl(Ala)6NH2 with an acetyl(Ala)5ProNH2 can arrest the growth of the sheet, suggesting a potential for curtailing amyloid growth. An ONIOM and density functional theory study.

Authors:  Gabor Pohl; Amparo Asensio; J J Dannenberg
Journal:  Biochemistry       Date:  2014-01-23       Impact factor: 3.162

7.  Computational study on single molecular spectroscopy of tyrosin-glycine, tryptophane-glycine and glycine-tryptophane.

Authors:  Bing Yang; Shixue Liu; Zijing Lin
Journal:  Sci Rep       Date:  2017-11-20       Impact factor: 4.379

  7 in total

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