Literature DB >> 16970354

High-accuracy quantum mechanical studies of pi-pi interactions in benzene dimers.

Mutasem Omar Sinnokrot1, C David Sherrill.   

Abstract

Although supramolecular chemistry and noncovalent interactions are playing an increasingly important role in modern chemical research, a detailed understanding of prototype noncovalent interactions remains lacking. In particular, pi-pi interactions, which are ubiquitous in biological systems, are not fully understood in terms of their strength, geometrical dependence, substituent effects, or fundamental physical nature. However, state-of-the-art quantum chemical methods are beginning to provide answers to these questions. Coupled-cluster theory through perturbative triple excitations in conjunction with large basis sets and extrapolations to the complete basis set limit have provided definitive results for the binding energy of several configurations of the benzene dimer, and benchmark-quality ab initio potential curves are being used to calibrate new density functional and force-field models for pi-pi interactions. Studies of substituted benzene dimers indicate flaws in the conventional wisdom about substituent effects in pi-pi interactions. Three-body and four-body interactions in benzene clusters have also been examined.

Entities:  

Year:  2006        PMID: 16970354     DOI: 10.1021/jp0610416

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  54 in total

1.  Noncovalent interactions in extended systems described by the effective fragment potential method: theory and application to nucleobase oligomers.

Authors:  Debashree Ghosh; Dmytro Kosenkov; Vitalii Vanovschi; Christopher F Williams; John M Herbert; Mark S Gordon; Michael W Schmidt; Lyudmila V Slipchenko; Anna I Krylov
Journal:  J Phys Chem A       Date:  2010-11-10       Impact factor: 2.781

2.  Polarizable empirical force field for aromatic compounds based on the classical drude oscillator.

Authors:  Pedro E M Lopes; Guillaume Lamoureux; Benoît Roux; Alexander D Mackerell
Journal:  J Phys Chem B       Date:  2007-02-27       Impact factor: 2.991

3.  Structure-activity relationships of antitubercular nitroimidazoles. 3. Exploration of the linker and lipophilic tail of ((s)-2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yl)-(4-trifluoromethoxybenzyl)amine (6-amino PA-824).

Authors:  Joseph Cherian; Inhee Choi; Amit Nayyar; Ujjini H Manjunatha; Tathagata Mukherjee; Yong Sok Lee; Helena I Boshoff; Ramandeep Singh; Young Hwan Ha; Michael Goodwin; Suresh B Lakshminarayana; Pornwaratt Niyomrattanakit; Jan Jiricek; Sindhu Ravindran; Thomas Dick; Thomas H Keller; Veronique Dartois; Clifton E Barry
Journal:  J Med Chem       Date:  2011-07-26       Impact factor: 7.446

4.  Stacking and hydrogen bond interactions between adenine and gallic acid.

Authors:  Isidro Lorenzo; Ana M Graña
Journal:  J Mol Model       Date:  2013-10-24       Impact factor: 1.810

5.  Structure-based stabilization of insulin as a therapeutic protein assembly via enhanced aromatic-aromatic interactions.

Authors:  Nischay K Rege; Nalinda P Wickramasinghe; Alisar N Tustan; Nelson F B Phillips; Vivien C Yee; Faramarz Ismail-Beigi; Michael A Weiss
Journal:  J Biol Chem       Date:  2018-06-07       Impact factor: 5.157

6.  7-Ethynylcoumarins: selective inhibitors of human cytochrome P450s 1A1 and 1A2.

Authors:  Jiawang Liu; Thong T Nguyen; Patrick S Dupart; Jayalakshmi Sridhar; Xiaoyi Zhang; Naijue Zhu; Cheryl L Klein Stevens; Maryam Foroozesh
Journal:  Chem Res Toxicol       Date:  2012-04-10       Impact factor: 3.739

7.  Models of S/pi interactions in protein structures: comparison of the H2S benzene complex with PDB data.

Authors:  Ashley L Ringer; Anastasia Senenko; C David Sherrill
Journal:  Protein Sci       Date:  2007-08-31       Impact factor: 6.725

8.  Methyl-methoxylpyrrolinone and flavinium nucleus binding signatures on falcipain-2 active site.

Authors:  Olaposi I Omotuyi
Journal:  J Mol Model       Date:  2014-08-06       Impact factor: 1.810

9.  Computational study on C-H...π interactions of acetylene with benzene, 1,3,5-trifluorobenzene and coronene.

Authors:  Tandabany C Dinadayalane; Guvanchmyrat Paytakov; Jerzy Leszczynski
Journal:  J Mol Model       Date:  2012-12-18       Impact factor: 1.810

10.  Theoretical study on the complexes of benzene with isoelectronic nitrogen-containing heterocycles.

Authors:  Weizhou Wang; Pavel Hobza
Journal:  Chemphyschem       Date:  2008-05-16       Impact factor: 3.102

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