Literature DB >> 23038219

Patterns of molecular motors that guide and sort filaments.

Beat Rupp1, François Nédélec.   

Abstract

Molecular motors can be immobilized to transport filaments and loads that are attached to these filaments inside a nano-device. However, if motors are distributed uniformly over a flat surface, the motility is undirected, and the filaments move equally in all directions. For many applications it is important to control the direction in which the filaments move, and two strategies have been explored to achieve this: applying external forces and confining the filaments inside channels. In this article, we discuss a third strategy in which the topography of the sample remains flat, but the motors are distributed non-uniformly over the surface. Systems of filaments and patterned molecular motors were simulated using a stochastic engine that included Brownian motion and filament bending elasticity. Using an evolutionary algorithm, patterns were optimized for their capacity to precisely control the paths of the filaments. We identified patterns of motors that could either direct the filaments in a particular direction, or separate short and long filaments. These functionalities already exceed what has been achieved with confinement. The patterns are composed of one or two types of motors positioned in lines or along arcs and should be easy to manufacture. Finally, these patterns can be easily combined into larger designs, allowing one to precisely control the motion of microscopic objects inside a device.

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Year:  2012        PMID: 23038219     DOI: 10.1039/c2lc40250e

Source DB:  PubMed          Journal:  Lab Chip        ISSN: 1473-0189            Impact factor:   6.799


  7 in total

1.  Parallel computation with molecular-motor-propelled agents in nanofabricated networks.

Authors:  Dan V Nicolau; Mercy Lard; Till Korten; Falco C M J M van Delft; Malin Persson; Elina Bengtsson; Alf Månsson; Stefan Diez; Heiner Linke; Dan V Nicolau
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-22       Impact factor: 11.205

2.  Geometrical and mechanical properties control actin filament organization.

Authors:  Gaëlle Letort; Antonio Z Politi; Hajer Ennomani; Manuel Théry; Francois Nedelec; Laurent Blanchoin
Journal:  PLoS Comput Biol       Date:  2015-05-27       Impact factor: 4.475

3.  A Motor-Gradient and Clustering Model of the Centripetal Motility of MTOCs in Meiosis I of Mouse Oocytes.

Authors:  Neha Khetan; Chaitanya A Athale
Journal:  PLoS Comput Biol       Date:  2016-10-05       Impact factor: 4.475

4.  Chromosomes function as a barrier to mitotic spindle bipolarity in polyploid cells.

Authors:  Alix Goupil; Maddalena Nano; Gaëlle Letort; Simon Gemble; Frances Edwards; Oumou Goundiam; Delphine Gogendeau; Carole Pennetier; Renata Basto
Journal:  J Cell Biol       Date:  2020-04-06       Impact factor: 10.539

5.  Linking path and filament persistence lengths of microtubules gliding over kinesin.

Authors:  May Sweet; Samuel Macharia Kang'iri; Takahiro Nitta
Journal:  Sci Rep       Date:  2022-02-23       Impact factor: 4.379

6.  Controlling the Rigidity of Kinesin-Propelled Microtubules in an In Vitro Gliding Assay Using the Deep-Sea Osmolyte Trimethylamine N-Oxide.

Authors:  Arif Md Rashedul Kabir; Tasrina Munmun; Tomohiko Hayashi; Satoshi Yasuda; Atsushi P Kimura; Masahiro Kinoshita; Takeshi Murata; Kazuki Sada; Akira Kakugo
Journal:  ACS Omega       Date:  2022-01-24

7.  MEDYAN: Mechanochemical Simulations of Contraction and Polarity Alignment in Actomyosin Networks.

Authors:  Konstantin Popov; James Komianos; Garegin A Papoian
Journal:  PLoS Comput Biol       Date:  2016-04-27       Impact factor: 4.475

  7 in total

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