Literature DB >> 23033069

Protein encapsulation within synthetic molecular hosts.

Daishi Fujita1, Kosuke Suzuki, Sota Sato, Maho Yagi-Utsumi, Yoshiki Yamaguchi, Nobuhiro Mizuno, Takashi Kumasaka, Masaki Takata, Masanori Noda, Susumu Uchiyama, Koichi Kato, Makoto Fujita.   

Abstract

Protein encapsulation has long attracted many chemists and biologists because of its potential to control the structure and functions of proteins, but has been a daunting challenge because of their incommensurably larger size compared with common synthetic hosts. Here we report the encapsulation of a small protein, ubiquitin, within giant coordination cages. The protein was attached to one bidentate ligand and, upon addition of Pd(II) ions (M) and additional ligands (L), M(12)L(24) coordination nanocages self-assembled around the protein. Because of the well-defined host framework, the protein-encapsulated structure could be analysed by NMR spectroscopy, ultracentrifugation and X-ray crystallography.

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Year:  2012        PMID: 23033069     DOI: 10.1038/ncomms2093

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  29 in total

Review 1.  Chaperonin-mediated protein folding.

Authors:  D Thirumalai; G H Lorimer
Journal:  Annu Rev Biophys Biomol Struct       Date:  2001

2.  Entrapping enzyme in a functionalized nanoporous support.

Authors:  Chenghong Lei; Yongsoon Shin; Jun Liu; Eric J Ackerman
Journal:  J Am Chem Soc       Date:  2002-09-25       Impact factor: 15.419

3.  Fluorous nanodroplets structurally confined in an organopalladium sphere.

Authors:  Sota Sato; Junya Iida; Kosuke Suzuki; Masaki Kawano; Tomoji Ozeki; Makoto Fujita
Journal:  Science       Date:  2006-09-01       Impact factor: 47.728

4.  The MEM/Rietveld method with nano-applications - accurate charge-density studies of nano-structured materials by synchrotron-radiation powder diffraction.

Authors:  Masaki Takata
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

5.  A virus-based single-enzyme nanoreactor.

Authors:  Marta Comellas-Aragonès; Hans Engelkamp; Victor I Claessen; Nico A J M Sommerdijk; Alan E Rowan; Peter C M Christianen; Jan C Maan; Benedictus J M Verduin; Jeroen J L M Cornelissen; Roeland J M Nolte
Journal:  Nat Nanotechnol       Date:  2007-09-23       Impact factor: 39.213

Review 6.  The ubiquitin system.

Authors:  A Hershko; A Ciechanover
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

7.  The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex.

Authors:  Z Xu; A L Horwich; P B Sigler
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

8.  Highly controlled acetylene accommodation in a metal-organic microporous material.

Authors:  Ryotaro Matsuda; Ryo Kitaura; Susumu Kitagawa; Yoshiki Kubota; Rodion V Belosludov; Tatsuo C Kobayashi; Hirotoshi Sakamoto; Takashi Chiba; Masaki Takata; Yoshiyuki Kawazoe; Yoshimi Mita
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

Review 9.  Enzymes inside lipid vesicles: preparation, reactivity and applications.

Authors:  P Walde; S Ichikawa
Journal:  Biomol Eng       Date:  2001-10-31

10.  Formation of a one-dimensional array of oxygen in a microporous metal-organic solid.

Authors:  Ryo Kitaura; Susumu Kitagawa; Yoshiki Kubota; Tatsuo C Kobayashi; Koichi Kindo; Yoshimi Mita; Akira Matsuo; Michihiro Kobayashi; Ho-Chol Chang; Tadashi C Ozawa; Megumi Suzuki; Makoto Sakata; Masaki Takata
Journal:  Science       Date:  2002-12-20       Impact factor: 47.728

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  22 in total

1.  Geometric curvature controls the chemical patchiness and self-assembly of nanoparticles.

Authors:  David A Walker; Emily K Leitsch; Rikkert J Nap; Igal Szleifer; Bartosz A Grzybowski
Journal:  Nat Nanotechnol       Date:  2013-08-18       Impact factor: 39.213

2.  Dimerization is not a determining factor for functional high affinity human plasminogen binding by the group A streptococcal virulence factor PAM and is mediated by specific residues within the PAM a1a2 domain.

Authors:  Sarbani Bhattacharya; Zhong Liang; Adam J Quek; Victoria A Ploplis; Ruby Law; Francis J Castellino
Journal:  J Biol Chem       Date:  2014-06-24       Impact factor: 5.157

3.  Design and Applications of Water-Soluble Coordination Cages.

Authors:  Edmundo G Percástegui; Tanya K Ronson; Jonathan R Nitschke
Journal:  Chem Rev       Date:  2020-11-25       Impact factor: 60.622

4.  Self-Assembled Fluorescent Pt(II) Metallacycles as Artificial Light-Harvesting Systems.

Authors:  Koushik Acharyya; Soumalya Bhattacharyya; Hajar Sepehrpour; Shubhadip Chakraborty; Shuai Lu; Bingbing Shi; Xiaopeng Li; Partha Sarathi Mukherjee; Peter J Stang
Journal:  J Am Chem Soc       Date:  2019-09-06       Impact factor: 15.419

5.  Synthesis of a Fluorophore with Improved Optical Brightness.

Authors:  Macduff Okuom; Mark Wilson; Jordan Groathouse; Junsik Lee; Dave Symonsbergen; Casey Gustafson; Mitch Trauernicht; Homar Barcena; Cassie Reicks; Sharmin Sikich; Raychelle Burks; Andrea Holmes
Journal:  Int J Org Chem (Irvine)       Date:  2013-12

Review 6.  Experimental and computational characterization of dynamic biomolecular interaction systems involving glycolipid glycans.

Authors:  Koichi Kato; Takumi Yamaguchi; Maho Yagi-Utsumi
Journal:  Glycoconj J       Date:  2022-03-17       Impact factor: 2.916

7.  Intermolecular Interactions between Eosin Y and Caffeine Using 1H-NMR Spectroscopy.

Authors:  Macduff O Okuom; Mark V Wilson; Abby Jackson; Andrea E Holmes
Journal:  Int J Spectrosc       Date:  2013-12-31

8.  Self-assembly of dynamic orthoester cryptates.

Authors:  René-Chris Brachvogel; Frank Hampel; Max von Delius
Journal:  Nat Commun       Date:  2015-05-22       Impact factor: 14.919

9.  Fitting Proteins into Metal Organic Frameworks.

Authors:  Daishi Fujita; Makoto Fujita
Journal:  ACS Cent Sci       Date:  2015-09-29       Impact factor: 14.553

10.  Imparting biomolecules to a metal-organic framework material by controlled DNA tetrahedron encapsulation.

Authors:  Yongmei Jia; Benmei Wei; Ruixue Duan; Ying Zhang; Boya Wang; Abdul Hakeem; Nannan Liu; Xiaowen Ou; Shaofang Xu; Zhifei Chen; Xiaoding Lou; Fan Xia
Journal:  Sci Rep       Date:  2014-08-04       Impact factor: 4.379

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