Literature DB >> 23031510

Structural view on recycling of archaeal and eukaryotic ribosomes after canonical termination and ribosome rescue.

Sibylle Franckenberg1, Thomas Becker, Roland Beckmann.   

Abstract

Ribosome recycling usually occurs after canonical termination triggered by a stop codon. Additionally, ribosomes that are stalled by aberrant mRNAs need to be recognized and subsequently recycled. In eukaryotes and archaea, the factors involved in canonical termination and ribosome rescue are structurally and functionally related. Both termination and ribosome rescue are mediated by class I release factors (eRF1/aRF1 in eukaryotic/archaeal termination) or their paralogs (Pelota/aPelota for ribosome rescue) and homologs of translational GTPases (eRF3/aEF1α in termination, Hbs1/aEF1α in ribosome rescue). These events are followed by recycling of the ribosome. Recently the ATPase ABCE1 was shown to be the main ribosome recycling factor. In concert with eRF1 or Pelota, ABCE1 dissociates the ribosome into subunits. During the past two years, several structures of ribosome rescue and ribosome recycling complexes have been solved by cryo-electron microscopy and crystallography. These structures along with recent functional data make it possible to propose a molecular model of these late translation events in termination and recycling.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23031510     DOI: 10.1016/j.sbi.2012.08.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  16 in total

1.  Release factor eRF3 mediates premature translation termination on polylysine-stalled ribosomes in Saccharomyces cerevisiae.

Authors:  Marco Chiabudini; Arlette Tais; Ying Zhang; Sachiko Hayashi; Tina Wölfle; Edith Fitzke; Sabine Rospert
Journal:  Mol Cell Biol       Date:  2014-08-25       Impact factor: 4.272

2.  Structure of the 40S-ABCE1 post-splitting complex in ribosome recycling and translation initiation.

Authors:  André Heuer; Milan Gerovac; Christian Schmidt; Simon Trowitzsch; Anne Preis; Peter Kötter; Otto Berninghausen; Thomas Becker; Roland Beckmann; Robert Tampé
Journal:  Nat Struct Mol Biol       Date:  2017-04-03       Impact factor: 15.369

3.  Structural basis for ArfA-RF2-mediated translation termination on mRNAs lacking stop codons.

Authors:  Paul Huter; Claudia Müller; Bertrand Beckert; Stefan Arenz; Otto Berninghausen; Roland Beckmann; Daniel N Wilson
Journal:  Nature       Date:  2016-12-01       Impact factor: 49.962

4.  The ABCs of the ribosome.

Authors:  Kurt Fredrick; Michael Ibba
Journal:  Nat Struct Mol Biol       Date:  2014-02       Impact factor: 15.369

5.  Cryo-EM of ribosomal 80S complexes with termination factors reveals the translocated cricket paralysis virus IRES.

Authors:  Margarita Muhs; Tarek Hilal; Thorsten Mielke; Maxim A Skabkin; Karissa Y Sanbonmatsu; Tatyana V Pestova; Christian M T Spahn
Journal:  Mol Cell       Date:  2015-01-15       Impact factor: 17.970

Review 6.  Quantitative studies of mRNA recruitment to the eukaryotic ribosome.

Authors:  Christopher S Fraser
Journal:  Biochimie       Date:  2015-03-02       Impact factor: 4.372

7.  Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome.

Authors:  Christian Schmidt; Thomas Becker; André Heuer; Katharina Braunger; Vivekanandan Shanmuganathan; Markus Pech; Otto Berninghausen; Daniel N Wilson; Roland Beckmann
Journal:  Nucleic Acids Res       Date:  2015-12-28       Impact factor: 16.971

8.  Atomic mutagenesis of stop codon nucleotides reveals the chemical prerequisites for release factor-mediated peptide release.

Authors:  Thomas Philipp Hoernes; Nina Clementi; Michael Andreas Juen; Xinying Shi; Klaus Faserl; Jessica Willi; Catherina Gasser; Christoph Kreutz; Simpson Joseph; Herbert Lindner; Alexander Hüttenhofer; Matthias David Erlacher
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-03       Impact factor: 11.205

9.  Ribosome recycling induces optimal translation rate at low ribosomal availability.

Authors:  E Marshall; I Stansfield; M C Romano
Journal:  J R Soc Interface       Date:  2014-09-06       Impact factor: 4.118

10.  Structure of the ribosome post-recycling complex probed by chemical cross-linking and mass spectrometry.

Authors:  Kristin Kiosze-Becker; Alessandro Ori; Milan Gerovac; André Heuer; Elina Nürenberg-Goloub; Umar Jan Rashid; Thomas Becker; Roland Beckmann; Martin Beck; Robert Tampé
Journal:  Nat Commun       Date:  2016-11-08       Impact factor: 14.919

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