Literature DB >> 23021022

Teosinte as a model system for population and ecological genomics.

Matthew B Hufford1, Paul Bilinski, Tanja Pyhäjärvi, Jeffrey Ross-Ibarra.   

Abstract

As the cost of next-generation sequencing diminishes and genomic resources improve, crop wild relatives are well positioned to make major contributions to the field of ecological genomics via full-genome resequencing and reference-assisted de novo assembly of genomes of plants from natural populations. The wild relatives of maize, collectively known as teosinte, are a more varied and representative study system than many other model flowering plants. In this review of the population and ecological genomics of the teosintes we highlight recent advances in the study of maize domestication, introgressive hybridization, and local adaptation, and discuss future prospects for applying the genomic resources of maize to this intriguing group of species. The maize/teosinte study system is an excellent example of how crops and their wild relatives can bridge the model/non-model gap.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23021022     DOI: 10.1016/j.tig.2012.08.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  29 in total

1.  Inbreeding drives maize centromere evolution.

Authors:  Kevin L Schneider; Zidian Xie; Thomas K Wolfgruber; Gernot G Presting
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-08       Impact factor: 11.205

2.  Climate change is predicted to disrupt patterns of local adaptation in wild and cultivated maize.

Authors:  Jonás A Aguirre-Liguori; Santiago Ramírez-Barahona; Peter Tiffin; Luis E Eguiarte
Journal:  Proc Biol Sci       Date:  2019-07-10       Impact factor: 5.349

3.  Plastid phylogenomic study of species within the genus Zea: rates and patterns of three classes of microstructural changes.

Authors:  Lauren M Orton; Sean V Burke; William P Wysocki; Melvin R Duvall
Journal:  Curr Genet       Date:  2016-08-03       Impact factor: 3.886

4.  Detecting Recent Positive Selection with a Single Locus Test Bipartitioning the Coalescent Tree.

Authors:  Zongfeng Yang; Junrui Li; Thomas Wiehe; Haipeng Li
Journal:  Genetics       Date:  2017-12-07       Impact factor: 4.562

5.  High-precision chronology for Central American maize diversification from El Gigante rockshelter, Honduras.

Authors:  Douglas J Kennett; Heather B Thakar; Amber M VanDerwarker; David L Webster; Brendan J Culleton; Thomas K Harper; Logan Kistler; Timothy E Scheffler; Kenneth Hirth
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-07       Impact factor: 11.205

Review 6.  Maintenance of genetic diversity through plant-herbivore interactions.

Authors:  Andrew D Gloss; Anna C Nelson Dittrich; Benjamin Goldman-Huertas; Noah K Whiteman
Journal:  Curr Opin Plant Biol       Date:  2013-07-05       Impact factor: 7.834

7.  Mutator-Based Transposon Display: A Genetic Tool for Evolutionary and Crop-Improvement Studies in Maize.

Authors:  Rahul Vasudeo Ramekar; Kyong-Cheul Park; Kyu Jin Sa; Ju Kyong Lee
Journal:  Mol Biotechnol       Date:  2018-11       Impact factor: 2.695

8.  The transcription factor bZIP68 negatively regulates cold tolerance in maize.

Authors:  Zhuoyang Li; Diyi Fu; Xi Wang; Rong Zeng; Xuan Zhang; Jinge Tian; Shuaisong Zhang; Xiaohong Yang; Feng Tian; Jinsheng Lai; Yiting Shi; Shuhua Yang
Journal:  Plant Cell       Date:  2022-07-30       Impact factor: 12.085

9.  Out in the cold: variation in the ZmbZIP68 promoter modulates cold tolerance in maize.

Authors:  Suzanne de Bruijn
Journal:  Plant Cell       Date:  2022-07-30       Impact factor: 12.085

10.  Flooding tolerance in interspecific introgression lines containing chromosome segments from teosinte (Zea nicaraguensis) in maize (Zea mays subsp. mays).

Authors:  Y Mano; F Omori
Journal:  Ann Bot       Date:  2013-07-21       Impact factor: 4.357

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