Literature DB >> 23014715

A virtual imaging platform for multi-modality medical image simulation.

Tristan Glatard1, Carole Lartizien, Bernard Gibaud, Rafael Ferreira da Silva, Germain Forestier, Frédéric Cervenansky, Martino Alessandrini, Hugues Benoit-Cattin, Olivier Bernard, Sorina Camarasu-Pop, Nadia Cerezo, Patrick Clarysse, Alban Gaignard, Patrick Hugonnard, Hervé Liebgott, Simon Marache, Adrien Marion, Johan Montagnat, Joachim Tabary, Denis Friboulet.   

Abstract

This paper presents the Virtual Imaging Platform (VIP), a platform accessible at http://vip.creatis.insa-lyon.fr to facilitate the sharing of object models and medical image simulators, and to provide access to distributed computing and storage resources. A complete overview is presented, describing the ontologies designed to share models in a common repository, the workflow template used to integrate simulators, and the tools and strategies used to exploit computing and storage resources. Simulation results obtained in four image modalities and with different models show that VIP is versatile and robust enough to support large simulations. The platform currently has 200 registered users who consumed 33 years of CPU time in 2011.

Mesh:

Year:  2013        PMID: 23014715     DOI: 10.1109/TMI.2012.2220154

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  12 in total

Review 1.  Biomarkers, designs, and interpretations of resting-state fMRI in translational pharmacological research: A review of state-of-the-Art, challenges, and opportunities for studying brain chemistry.

Authors:  Najmeh Khalili-Mahani; Serge A R B Rombouts; Matthias J P van Osch; Eugene P Duff; Felix Carbonell; Lisa D Nickerson; Lino Becerra; Albert Dahan; Alan C Evans; Jean-Paul Soucy; Richard Wise; Alex P Zijdenbos; Joop M van Gerven
Journal:  Hum Brain Mapp       Date:  2017-02-01       Impact factor: 5.038

2.  Building an open-source simulation platform of acoustic radiation force-based breast elastography.

Authors:  Yu Wang; Bo Peng; Jingfeng Jiang
Journal:  Phys Med Biol       Date:  2017-01-11       Impact factor: 3.609

3.  OntoVIP: an ontology for the annotation of object models used for medical image simulation.

Authors:  Bernard Gibaud; Germain Forestier; Hugues Benoit-Cattin; Frédéric Cervenansky; Patrick Clarysse; Denis Friboulet; Alban Gaignard; Patrick Hugonnard; Carole Lartizien; Hervé Liebgott; Johan Montagnat; Joachim Tabary; Tristan Glatard
Journal:  J Biomed Inform       Date:  2014-07-16       Impact factor: 6.317

4.  The first MICCAI challenge on PET tumor segmentation.

Authors:  Mathieu Hatt; Baptiste Laurent; Anouar Ouahabi; Hadi Fayad; Shan Tan; Laquan Li; Wei Lu; Vincent Jaouen; Clovis Tauber; Jakub Czakon; Filip Drapejkowski; Witold Dyrka; Sorina Camarasu-Pop; Frédéric Cervenansky; Pascal Girard; Tristan Glatard; Michael Kain; Yao Yao; Christian Barillot; Assen Kirov; Dimitris Visvikis
Journal:  Med Image Anal       Date:  2017-12-09       Impact factor: 8.545

5.  Big heart data: advancing health informatics through data sharing in cardiovascular imaging.

Authors:  Avan Suinesiaputra; Pau Medrano-Gracia; Brett R Cowan; Alistair A Young
Journal:  IEEE J Biomed Health Inform       Date:  2014-11-14       Impact factor: 5.772

6.  Early experiences in developing and managing the neuroscience gateway.

Authors:  Subhashini Sivagnanam; Amit Majumdar; Kenneth Yoshimoto; Vadim Astakhov; Anita Bandrowski; MaryAnn Martone; Nicholas T Carnevale
Journal:  Concurr Comput       Date:  2015-02-01       Impact factor: 1.536

7.  Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure.

Authors:  Olivier Commowick; Audrey Istace; Michaël Kain; Baptiste Laurent; Florent Leray; Mathieu Simon; Sorina Camarasu Pop; Pascal Girard; Roxana Améli; Jean-Christophe Ferré; Anne Kerbrat; Thomas Tourdias; Frédéric Cervenansky; Tristan Glatard; Jérémy Beaumont; Senan Doyle; Florence Forbes; Jesse Knight; April Khademi; Amirreza Mahbod; Chunliang Wang; Richard McKinley; Franca Wagner; John Muschelli; Elizabeth Sweeney; Eloy Roura; Xavier Lladó; Michel M Santos; Wellington P Santos; Abel G Silva-Filho; Xavier Tomas-Fernandez; Hélène Urien; Isabelle Bloch; Sergi Valverde; Mariano Cabezas; Francisco Javier Vera-Olmos; Norberto Malpica; Charles Guttmann; Sandra Vukusic; Gilles Edan; Michel Dojat; Martin Styner; Simon K Warfield; François Cotton; Christian Barillot
Journal:  Sci Rep       Date:  2018-09-12       Impact factor: 4.379

8.  Head-to-head comparison of two popular cortical thickness extraction algorithms: a cross-sectional and longitudinal study.

Authors:  Alberto Redolfi; David Manset; Frederik Barkhof; Lars-Olof Wahlund; Tristan Glatard; Jean-François Mangin; Giovanni B Frisoni
Journal:  PLoS One       Date:  2015-03-17       Impact factor: 3.240

9.  CBRAIN: a web-based, distributed computing platform for collaborative neuroimaging research.

Authors:  Tarek Sherif; Pierre Rioux; Marc-Etienne Rousseau; Nicolas Kassis; Natacha Beck; Reza Adalat; Samir Das; Tristan Glatard; Alan C Evans
Journal:  Front Neuroinform       Date:  2014-05-21       Impact factor: 4.081

10.  Enabling 3D-Liver Perfusion Mapping from MR-DCE Imaging Using Distributed Computing.

Authors:  Benjamin Leporq; Sorina Camarasu-Pop; Eduardo E Davila-Serrano; Frank Pilleul; Olivier Beuf
Journal:  J Med Eng       Date:  2013-02-26
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