Literature DB >> 23011808

A major X-linked locus affects kidney function in mice.

Magalie S Leduc1, Holly S Savage, Timothy M Stearns, Clinton L Cario, Kenneth A Walsh, Beverly Paigen, Annerose Berndt.   

Abstract

Chronic kidney disease is a common disease with increasing prevalence in the western population. One common reason for chronic kidney failure is diabetic nephropathy. Diabetic nephropathy and hyperglycemia are characteristics of the mouse inbred strain KK/HlJ, which is predominantly used as a model for metabolic syndrome due to its inherited glucose intolerance and insulin resistance. We used KK/HlJ, an albuminuria-sensitive strain, and C57BL/6J, an albuminuria-resistant strain, to perform a quantitative trait locus (QTL) cross to identify the genetic basis for chronic kidney failure. Albumin-creatinine ratio (ACR) was measured in 130 F2 male offspring. One significant QTL was identified on chromosome (Chr) X and four suggestive QTL were found on Chrs 6, 7, 12, and 13. Narrowing of the QTL region was focused on the X-linked QTL and performed by incorporating genotype and expression analyses for genes located in the region. From the 485 genes identified in the X-linked QTL region, a few candidate genes were identified using a combination of bioinformatic evidence based on genomic comparison of the parental strains and known function in urine homeostasis. Finally, this study demonstrates the significance of the X chromosome in the genetic determination of albuminuria.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23011808      PMCID: PMC3508201          DOI: 10.1007/s00438-012-0720-x

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  30 in total

1.  Predicting deleterious amino acid substitutions.

Authors:  P C Ng; S Henikoff
Journal:  Genome Res       Date:  2001-05       Impact factor: 9.043

Review 2.  Vasopressin receptors.

Authors:  M Birnbaumer
Journal:  Trends Endocrinol Metab       Date:  2000-12       Impact factor: 12.015

3.  R/qtl: QTL mapping in experimental crosses.

Authors:  Karl W Broman; Hao Wu; Saunak Sen; Gary A Churchill
Journal:  Bioinformatics       Date:  2003-05-01       Impact factor: 6.937

4.  Uncovering genes and regulatory pathways related to urinary albumin excretion.

Authors:  Rachael S Hageman; Magalie S Leduc; Christina R Caputo; Shirng-Wern Tsaih; Gary A Churchill; Ron Korstanje
Journal:  J Am Soc Nephrol       Date:  2010-10-28       Impact factor: 10.121

5.  The mouse QTL map helps interpret human genome-wide association studies for HDL cholesterol.

Authors:  Magalie S Leduc; Malcolm Lyons; Katayoon Darvishi; Kenneth Walsh; Susan Sheehan; Sarah Amend; Allison Cox; Marju Orho-Melander; Sekar Kathiresan; Beverly Paigen; Ron Korstanje
Journal:  J Lipid Res       Date:  2011-03-28       Impact factor: 5.922

6.  Laboratory animals exhibiting obesity and diabetes syndromes.

Authors:  L Herberg; D L Coleman
Journal:  Metabolism       Date:  1977-01       Impact factor: 8.694

7.  A major gene locus links early onset albuminuria with renal interstitial fibrosis in the MWF rat with polygenetic albuminuria.

Authors:  Angela Schulz; Dorothea Standke; Larisa Kovacevic; Martin Mostler; Peter Kossmehl; Monika Stoll; Reinhold Kreutz
Journal:  J Am Soc Nephrol       Date:  2003-12       Impact factor: 10.121

8.  Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci.

Authors:  Sarah L Burgess-Herbert; Allison Cox; Shirng-Wern Tsaih; Beverly Paigen
Journal:  Genetics       Date:  2008-10-09       Impact factor: 4.562

9.  Selecting the "right" mouse model for metabolic syndrome and type 2 diabetes research.

Authors:  Edward H Leiter
Journal:  Methods Mol Biol       Date:  2009

10.  Effects of atherogenic diet on hepatic gene expression across mouse strains.

Authors:  Keith R Shockley; David Witmer; Sarah L Burgess-Herbert; Beverly Paigen; Gary A Churchill
Journal:  Physiol Genomics       Date:  2009-08-11       Impact factor: 3.107

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.