Literature DB >> 23011410

Cell signaling, post-translational protein modifications and NMR spectroscopy.

Francois-Xavier Theillet1, Caroline Smet-Nocca, Stamatios Liokatis, Rossukon Thongwichian, Jonas Kosten, Mi-Kyung Yoon, Richard W Kriwacki, Isabelle Landrieu, Guy Lippens, Philipp Selenko.   

Abstract

Post-translationally modified proteins make up the majority of the proteome and establish, to a large part, the impressive level of functional diversity in higher, multi-cellular organisms. Most eukaryotic post-translational protein modifications (PTMs) denote reversible, covalent additions of small chemical entities such as phosphate-, acyl-, alkyl- and glycosyl-groups onto selected subsets of modifiable amino acids. In turn, these modifications induce highly specific changes in the chemical environments of individual protein residues, which are readily detected by high-resolution NMR spectroscopy. In the following, we provide a concise compendium of NMR characteristics of the main types of eukaryotic PTMs: serine, threonine, tyrosine and histidine phosphorylation, lysine acetylation, lysine and arginine methylation, and serine, threonine O-glycosylation. We further delineate the previously uncharacterized NMR properties of lysine propionylation, butyrylation, succinylation, malonylation and crotonylation, which, altogether, define an initial reference frame for comprehensive PTM studies by high-resolution NMR spectroscopy.

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Year:  2012        PMID: 23011410      PMCID: PMC4939263          DOI: 10.1007/s10858-012-9674-x

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  192 in total

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6.  Impact of phosphorylation on structure and thermodynamics of the interaction between the N-terminal domain of enzyme I and the histidine phosphocarrier protein of the bacterial phosphotransferase system.

Authors:  Jeong-Yong Suh; Mengli Cai; G Marius Clore
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Review 7.  Structure and function of the phosphothreonine-specific FHA domain.

Authors:  Anjali Mahajan; Chunhua Yuan; Hyun Lee; Eric S-W Chen; Pei-Yu Wu; Ming-Daw Tsai
Journal:  Sci Signal       Date:  2008-12-23       Impact factor: 8.192

8.  N-lysine propionylation controls the activity of propionyl-CoA synthetase.

Authors:  Jane Garrity; Jeffrey G Gardner; William Hawse; Cynthia Wolberger; Jorge C Escalante-Semerena
Journal:  J Biol Chem       Date:  2007-08-07       Impact factor: 5.157

9.  Identification and characterization of propionylation at histone H3 lysine 23 in mammalian cells.

Authors:  Bo Liu; Yihui Lin; Agus Darwanto; Xuehui Song; Guoliang Xu; Kangling Zhang
Journal:  J Biol Chem       Date:  2009-10-03       Impact factor: 5.157

10.  Proteome-wide post-translational modification statistics: frequency analysis and curation of the swiss-prot database.

Authors:  George A Khoury; Richard C Baliban; Christodoulos A Floudas
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6.  Unraveling a phosphorylation event in a folded protein by NMR spectroscopy: phosphorylation of the Pin1 WW domain by PKA.

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7.  Site-specific NMR mapping and time-resolved monitoring of serine and threonine phosphorylation in reconstituted kinase reactions and mammalian cell extracts.

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Review 8.  Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).

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