Literature DB >> 23007399

A rapid, comprehensive liquid chromatography-mass spectrometry (LC-MS)-based survey of the Asp isomers in crystallins from human cataract lenses.

Norihiko Fujii1, Hiroaki Sakaue, Hiroshi Sasaki, Noriko Fujii.   

Abstract

Cataracts are caused by clouding of the eye lens and may lead to partial or total loss of vision. The mechanism of cataract development, however, is not well understood. It is thought that abnormal aggregates of lens proteins form with age, causing loss of lens clarity and development of the cataract. Lens proteins are composed of soluble α-, β-, and γ-crystallins, and as long lived proteins, they undergo post-translational modifications including isomerization, deamidation, and oxidation, which induce insolubilization, aggregation, and loss of function that may lead to cataracts. Therefore, analysis of post-translational modifications of individual amino acid residues in proteins is important. However, detection of the optical isomers of amino acids formed in these proteins is difficult because optical resolution is only achieved using complex methodology. In this study, we describe a new method for the analysis of isomerization of individual Asp residues in proteins using LC-MS and the corresponding synthetic peptides containing the Asp isomers. This makes it possible to analyze isomers of Asp residues in proteins precisely and quickly. We demonstrate that Asp-58, -76, -84, and -151 of αA-crystallin and Asp-62 and -96 of αB-crystallin are highly converted to lβ-, dβ-, and dα-isomers. The amount of isomerization of Asp is greater in the insoluble fraction at all Asp sites in lens proteins, therefore indicating that isomerization of these Asp residues affects the higher order structure of the proteins and contributes to the increase in aggregation, insolubilization, and disruption of function of proteins in the lens, leading to the cataract.

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Year:  2012        PMID: 23007399      PMCID: PMC3501074          DOI: 10.1074/jbc.M112.399972

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  44 in total

1.  UV B-irradiation enhances the racemization and isomerizaiton of aspartyl residues and production of Nε-carboxymethyl lysine (CML) in keratin of skin.

Authors:  Yuhei Mori; Kenzo Aki; Katsunori Kuge; Shingo Tajima; Natsuko Yamanaka; Yuichi Kaji; Naoki Yamamoto; Ryoji Nagai; Hanako Yoshii; Norihiko Fujii; Masami Watanabe; Tadatoshi Kinouchi; Noriko Fujii
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2011-05-17       Impact factor: 3.205

2.  Crystal structures of truncated alphaA and alphaB crystallins reveal structural mechanisms of polydispersity important for eye lens function.

Authors:  Arthur Laganowsky; Justin L P Benesch; Meytal Landau; Linlin Ding; Michael R Sawaya; Duilio Cascio; Qingling Huang; Carol V Robinson; Joseph Horwitz; David Eisenberg
Journal:  Protein Sci       Date:  2010-05       Impact factor: 6.725

3.  Racemization of two proteins over our lifespan: deamidation of asparagine 76 in γS crystallin is greater in cataract than in normal lenses across the age range.

Authors:  Michelle Yu Sung Hooi; Mark J Raftery; Roger John Willis Truscott
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-06-14       Impact factor: 4.799

4.  Influence of Lβ-, Dα- and Dβ-Asp isomers of the Asp-76 residue on the properties of αA-crystallin 70-88 peptide.

Authors:  Noriko Fujii; Norihiko Fujii; Masashi Kida; Tadatoshi Kinouchi
Journal:  Amino Acids       Date:  2010-05-01       Impact factor: 3.520

Review 5.  Age-related nuclear cataract-oxidation is the key.

Authors:  Roger J W Truscott
Journal:  Exp Eye Res       Date:  2005-05       Impact factor: 3.467

6.  Simultaneous stereoinversion and isomerization at the Asp-4 residue in βB2-crystallin from the aged human eye lenses.

Authors:  Norihiko Fujii; Takehiro Kawaguchi; Hiroshi Sasaki; Noriko Fujii
Journal:  Biochemistry       Date:  2011-09-14       Impact factor: 3.162

7.  Differentiation and semiquantitative analysis of an isoaspartic acid in human alpha-Crystallin by postsource decay in a curved field reflectron.

Authors:  Yuzo Yamazaki; Norihiko Fujii; Yutaka Sadakane; Noriko Fujii
Journal:  Anal Chem       Date:  2010-08-01       Impact factor: 6.986

8.  Simultaneous stereoinversion and isomerization at specific aspartic acid residues in alpha A-crystallin from human lens.

Authors:  N Fujii; K Satoh; K Harada; Y Ishibashi
Journal:  J Biochem       Date:  1994-09       Impact factor: 3.387

9.  αA-crystallin peptide SDRDKFVIFLDVKHF accumulating in aging lens impairs the function of α-crystallin and induces lens protein aggregation.

Authors:  Puttur Santhoshkumar; Murugesan Raju; K Krishna Sharma
Journal:  PLoS One       Date:  2011-04-28       Impact factor: 3.240

10.  Structural features of isomerizable aspartyl residues in human α-crystallins.

Authors:  Ken-ichi Shimizu; Akiko Kita; Noriko Fujii; Kunio Miki
Journal:  Mol Vis       Date:  2012-07-04       Impact factor: 2.367

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  24 in total

1.  The l-isoaspartate modification within protein fragments in the aging lens can promote protein aggregation.

Authors:  Rebeccah A Warmack; Harrison Shawa; Kate Liu; Katia Lopez; Joseph A Loo; Joseph Horwitz; Steven G Clarke
Journal:  J Biol Chem       Date:  2019-06-25       Impact factor: 5.157

Review 2.  Lens β-crystallins: the role of deamidation and related modifications in aging and cataract.

Authors:  Kirsten J Lampi; Phillip A Wilmarth; Matthew R Murray; Larry L David
Journal:  Prog Biophys Mol Biol       Date:  2014-03-06       Impact factor: 3.667

3.  Differences in α-Crystallin isomerization reveal the activity of protein isoaspartyl methyltransferase (PIMT) in the nucleus and cortex of human lenses.

Authors:  Yana A Lyon; Georgette M Sabbah; Ryan R Julian
Journal:  Exp Eye Res       Date:  2018-03-20       Impact factor: 3.467

4.  Site-specific rapid deamidation and isomerization in human lens αA-crystallin in vitro.

Authors:  Takumi Takata; Seongmin Ha; Tamaki Koide; Noriko Fujii
Journal:  Protein Sci       Date:  2020-01-16       Impact factor: 6.725

5.  Racemized and Isomerized Proteins in Aging Rat Teeth and Eye Lens.

Authors:  Rebeccah A Warmack; Eduardo Mansilla; Rodolfo G Goya; Steven G Clarke
Journal:  Rejuvenation Res       Date:  2016-02-26       Impact factor: 4.663

6.  Spontaneous cross-linking of proteins at aspartate and asparagine residues is mediated via a succinimide intermediate.

Authors:  Michael G Friedrich; Zhen Wang; Kevin L Schey; Roger J W Truscott
Journal:  Biochem J       Date:  2018-10-22       Impact factor: 3.857

7.  Identification of amino acid epimerization and isomerization in crystallin proteins by tandem LC-MS.

Authors:  Yuanqi Tao; Ryan R Julian
Journal:  Anal Chem       Date:  2014-09-16       Impact factor: 6.986

8.  Kinetics of isomerization and inversion of aspartate 58 of αA-crystallin peptide mimics under physiological conditions.

Authors:  Kenzo Aki; Norihiko Fujii; Noriko Fujii
Journal:  PLoS One       Date:  2013-03-07       Impact factor: 3.240

9.  Structural basis for the hyperthermostability of an archaeal enzyme induced by succinimide formation.

Authors:  Aparna Vilas Dongre; Sudip Das; Asutosh Bellur; Sanjeev Kumar; Anusha Chandrashekarmath; Tarak Karmakar; Padmanabhan Balaram; Sundaram Balasubramanian; Hemalatha Balaram
Journal:  Biophys J       Date:  2021-07-22       Impact factor: 3.699

Review 10.  Emerging issues in radiogenic cataracts and cardiovascular disease.

Authors:  Nobuyuki Hamada; Yuki Fujimichi; Toshiyasu Iwasaki; Noriko Fujii; Masato Furuhashi; Eri Kubo; Tohru Minamino; Takaharu Nomura; Hitoshi Sato
Journal:  J Radiat Res       Date:  2014-05-13       Impact factor: 2.724

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