Literature DB >> 22988242

A 22-mer segment in the structurally pliable regulatory domain of metazoan CTP: phosphocholine cytidylyltransferase facilitates both silencing and activating functions.

Ziwei Ding1, Svetla G Taneva, Harris K H Huang, Stephanie A Campbell, Lucie Semenec, Nansheng Chen, Rosemary B Cornell.   

Abstract

CTP:phosphocholine cytidylyltransferase (CCT), an amphitropic enzyme that regulates phosphatidylcholine synthesis, is composed of a catalytic head domain and a regulatory tail. The tail region has dual functions as a regulator of membrane binding/enzyme activation and as an inhibitor of catalysis in the unbound form of the enzyme, suggesting conformational plasticity. These functions are well conserved in CCTs across diverse phyla, although the sequences of the tail regions are not. CCT regulatory tails of diverse origins are composed of a long membrane lipid-inducible amphipathic helix (m-AH) followed by a highly disordered segment, reminiscent of the Parkinson disease-linked protein, α-synuclein, which we show shares a novel sequence motif with vertebrate CCTs. To unravel features required for silencing, we created chimeric enzymes by fusing the catalytic domain of rat CCTα to the regulatory tail of CCTs from Drosophila, Caenorhabditis elegans, or Saccharomyces cerevisiae or to α-synuclein. Only the tail domains of the two invertebrate CCTs were competent for both suppression of catalytic activity and for activation by lipid vesicles. Thus, both silencing and activating functions of the m-AH can tolerate significant changes in length and sequence. We identified a highly amphipathic 22-residue segment in the m-AH with features conserved among animal CCTs but not yeast CCT or α-synuclein. Deletion of this segment from rat CCT increased the lipid-independent V(max) by 10-fold, equivalent to the effect of deleting the entire tail, and severely weakened membrane binding affinity. However, membrane binding was required for additional increases in catalytic efficiency. Thus, full activation of CCT may require not only loss of a silencing conformation in the m-AH but a gain of an activating conformation, promoted by membrane binding.

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Year:  2012        PMID: 22988242      PMCID: PMC3493939          DOI: 10.1074/jbc.M112.402081

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  59 in total

1.  The amphipathic helix of an enzyme that regulates phosphatidylcholine synthesis remodels membranes into highly curved nanotubules.

Authors:  Svetla G Taneva; Joseph M C Lee; Rosemary B Cornell
Journal:  Biochim Biophys Acta       Date:  2012-01-18

2.  Interdomain and membrane interactions of CTP:phosphocholine cytidylyltransferase revealed via limited proteolysis and mass spectrometry.

Authors:  Michael J Bogan; George R Agnes; Frederic Pio; Rosemary B Cornell
Journal:  J Biol Chem       Date:  2005-02-15       Impact factor: 5.157

3.  Intrinsic disorder prediction from the analysis of multiple protein fold recognition models.

Authors:  Liam J McGuffin
Journal:  Bioinformatics       Date:  2008-06-25       Impact factor: 6.937

4.  Using CLUSTAL for multiple sequence alignments.

Authors:  D G Higgins; J D Thompson; T J Gibson
Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

5.  The lipid-binding domain of wild type and mutant alpha-synuclein: compactness and interconversion between the broken and extended helix forms.

Authors:  Elka R Georgieva; Trudy F Ramlall; Peter P Borbat; Jack H Freed; David Eliezer
Journal:  J Biol Chem       Date:  2010-06-30       Impact factor: 5.157

6.  Cloning and characterization of a lipid-activated CTP:phosphocholine cytidylyltransferase from Caenorhabditis elegans: identification of a 21-residue segment critical for lipid activation.

Authors:  J A Friesen; M F Liu; C Kent
Journal:  Biochim Biophys Acta       Date:  2001-09-28

7.  Contribution of lipid second messengers to the regulation of phosphatidylcholine synthesis during cell cycle re-entry.

Authors:  Michael N P Ng; Theresa E Kitos; Rosemary B Cornell
Journal:  Biochim Biophys Acta       Date:  2004-11-08

Review 8.  Amphipathic helices and membrane curvature.

Authors:  Guillaume Drin; Bruno Antonny
Journal:  FEBS Lett       Date:  2009-10-20       Impact factor: 4.124

9.  A structural and functional role for 11-mer repeats in alpha-synuclein and other exchangeable lipid binding proteins.

Authors:  Robert Bussell; David Eliezer
Journal:  J Mol Biol       Date:  2003-06-13       Impact factor: 5.469

10.  Nuclear export of the rate-limiting enzyme in phosphatidylcholine synthesis is mediated by its membrane binding domain.

Authors:  Karsten Gehrig; Craig C Morton; Neale D Ridgway
Journal:  J Lipid Res       Date:  2008-12-20       Impact factor: 5.922

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  13 in total

1.  Structural basis for autoinhibition of CTP:phosphocholine cytidylyltransferase (CCT), the regulatory enzyme in phosphatidylcholine synthesis, by its membrane-binding amphipathic helix.

Authors:  Jaeyong Lee; Svetla G Taneva; Bryan W Holland; D Peter Tieleman; Rosemary B Cornell
Journal:  J Biol Chem       Date:  2013-11-25       Impact factor: 5.157

2.  Interdomain communication in the phosphatidylcholine regulatory enzyme, CCTα, relies on a modular αE helix.

Authors:  Svetla G Taneva; Jaeyong Lee; Daniel G Knowles; Chanajai Tishyadhigama; Hongwen Chen; Rosemary B Cornell
Journal:  J Biol Chem       Date:  2019-09-04       Impact factor: 5.157

3.  Diacylglycerol Acyltransferase 1 Is Regulated by Its N-Terminal Domain in Response to Allosteric Effectors.

Authors:  Kristian Mark P Caldo; Jeella Z Acedo; Rashmi Panigrahi; John C Vederas; Randall J Weselake; M Joanne Lemieux
Journal:  Plant Physiol       Date:  2017-08-21       Impact factor: 8.340

4.  An auto-inhibitory helix in CTP:phosphocholine cytidylyltransferase hijacks the catalytic residue and constrains a pliable, domain-bridging helix pair.

Authors:  Mohsen Ramezanpour; Jaeyong Lee; Svetla G Taneva; D Peter Tieleman; Rosemary B Cornell
Journal:  J Biol Chem       Date:  2018-03-08       Impact factor: 5.157

5.  Disease-linked mutations in the phosphatidylcholine regulatory enzyme CCTα impair enzymatic activity and fold stability.

Authors:  Rosemary B Cornell; Svetla G Taneva; Melissa K Dennis; Ronnie Tse; Randeep K Dhillon; Jaeyong Lee
Journal:  J Biol Chem       Date:  2018-12-17       Impact factor: 5.157

6.  Arabidopsis CTP:phosphocholine cytidylyltransferase 1 is phosphorylated and inhibited by sucrose nonfermenting 1-related protein kinase 1 (SnRK1).

Authors:  Kristian Mark P Caldo; Yang Xu; Lucas Falarz; Kethmi Jayawardhane; Jeella Z Acedo; Guanqun Chen
Journal:  J Biol Chem       Date:  2019-08-22       Impact factor: 5.157

Review 7.  The biophysics and cell biology of lipid droplets.

Authors:  Abdou Rachid Thiam; Robert V Farese; Tobias C Walther
Journal:  Nat Rev Mol Cell Biol       Date:  2013-11-13       Impact factor: 94.444

8.  Mutations in PCYT1A, encoding a key regulator of phosphatidylcholine metabolism, cause spondylometaphyseal dysplasia with cone-rod dystrophy.

Authors:  Julie Hoover-Fong; Nara Sobreira; Julie Jurgens; Peggy Modaff; Carrie Blout; Ann Moser; Ok-Hwa Kim; Tae-Joon Cho; Sung Yoon Cho; Sang Jin Kim; Dong-Kyu Jin; Hiroshi Kitoh; Woong-Yang Park; Hua Ling; Kurt N Hetrick; Kimberly F Doheny; David Valle; Richard M Pauli
Journal:  Am J Hum Genet       Date:  2014-01-02       Impact factor: 11.025

9.  Molecular Mechanism for the Thermo-Sensitive Phenotype of CHO-MT58 Cell Line Harbouring a Mutant CTP:Phosphocholine Cytidylyltransferase.

Authors:  Lívia Marton; Gergely N Nagy; Olivér Ozohanics; Anikó Lábas; Balázs Krámos; Julianna Oláh; Károly Vékey; Beáta G Vértessy
Journal:  PLoS One       Date:  2015-06-17       Impact factor: 3.240

Review 10.  Alpha-synuclein function and dysfunction on cellular membranes.

Authors:  David Snead; David Eliezer
Journal:  Exp Neurobiol       Date:  2014-12-12       Impact factor: 3.261

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