Literature DB >> 22976191

Fluorescent single-stranded DNA-binding proteins enable in vitro and in vivo studies.

Piero R Bianco1, Adam J Stanenas, Juan Liu, Christopher S Cohan.   

Abstract

Fluorescent single-stranded DNA-binding proteins (SSB) that have a defined number of fluorophores per tetramer are invaluable tools to understand biochemical mechanism and biological function. Here, we describe the purification of fluorescent SSB chimeras with a unique number of fluorescent subunits incorporated per tetramer. We describe the use of these tetramers to enable clear visualization of SSB in vivo. Purified chimeras also facilitate single molecule studies (Liu et al., Protein Sci 20:1005-1020, 2011).

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Year:  2012        PMID: 22976191      PMCID: PMC5862424          DOI: 10.1007/978-1-62703-032-8_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  Structure of the DNA binding domain of E. coli SSB bound to ssDNA.

Authors:  S Raghunathan; A G Kozlov; T M Lohman; G Waksman
Journal:  Nat Struct Biol       Date:  2000-08

Review 2.  SSB as an organizer/mobilizer of genome maintenance complexes.

Authors:  Robert D Shereda; Alexander G Kozlov; Timothy M Lohman; Michael M Cox; James L Keck
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 Sep-Oct       Impact factor: 8.250

3.  Resolution of converging replication forks by RecQ and topoisomerase III.

Authors:  Catherine Suski; Kenneth J Marians
Journal:  Mol Cell       Date:  2008-06-20       Impact factor: 17.970

4.  Novel, fluorescent, SSB protein chimeras with broad utility.

Authors:  Juan Liu; Meerim Choi; Adam G Stanenas; Alicia K Byrd; Kevin D Raney; Christopher Cohan; Piero R Bianco
Journal:  Protein Sci       Date:  2011-04-27       Impact factor: 6.725

5.  A central role for SSB in Escherichia coli RecQ DNA helicase function.

Authors:  Robert D Shereda; Douglas A Bernstein; James L Keck
Journal:  J Biol Chem       Date:  2007-05-03       Impact factor: 5.157

6.  Fluorescent single-stranded DNA binding protein as a probe for sensitive, real-time assays of helicase activity.

Authors:  Mark S Dillingham; Katherine L Tibbles; Jackie L Hunter; Jason C Bell; Stephen C Kowalczykowski; Martin R Webb
Journal:  Biophys J       Date:  2008-07-03       Impact factor: 4.033

7.  RecG interacts directly with SSB: implications for stalled replication fork regression.

Authors:  Jackson A Buss; Yuji Kimura; Piero R Bianco
Journal:  Nucleic Acids Res       Date:  2008-11-05       Impact factor: 16.971

8.  SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

Authors:  Rahul Roy; Alexander G Kozlov; Timothy M Lohman; Taekjip Ha
Journal:  Nature       Date:  2009-10-11       Impact factor: 49.962

9.  Independent positioning and action of Escherichia coli replisomes in live cells.

Authors:  Rodrigo Reyes-Lamothe; Christophe Possoz; Olessia Danilova; David J Sherratt
Journal:  Cell       Date:  2008-04-04       Impact factor: 41.582

  9 in total
  2 in total

1.  In Vivo Binding of Single-Stranded DNA-Binding Protein to Stalled Replication Fork Helicases.

Authors:  Cong Yu; Piero R Bianco
Journal:  Methods Mol Biol       Date:  2021

2.  Rad51 Nucleoprotein Filament Disassembly Captured Using Fluorescent Plasmodium falciparum SSB as a Reporter for Single-Stranded DNA.

Authors:  Eric Parker Davenport; Derek F Harris; Sofia Origanti; Edwin Antony
Journal:  PLoS One       Date:  2016-07-14       Impact factor: 3.240

  2 in total

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