Literature DB >> 22972692

Insight on the interaction of polychlorobiphenyl with nucleic acid-base.

Soraya Abtouche1, Thibaut Very, Antonio Monari, Meziane Brahimi, Xavier Assfeld.   

Abstract

The interaction between one polychlorobiphenyl (3,3',4,4',-tetrachlorobiphenyl, coded PCB77) and the four DNA nucleic acid-base is studied by means of quantum mechanics calculations in stacked conformations. It is shown that even if the intermolecular dispersion energy is the largest component of the total interaction energy, some other contributions play a non negligible role. In particular the electrostatic dipole-dipole interaction and the charge transfer from the nucleobase to the PCB are responsible for the relative orientation of the monomers in the complexes. In addition, the charge transfer tends to flatten the PCB, which could therefore intercalate more easily between DNA base pairs. From these seminal results, we predict that PCB could intercalate completely between two base pairs, preferably between Guanine:Cytosine pairs.

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Year:  2012        PMID: 22972692     DOI: 10.1007/s00894-012-1580-3

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  24 in total

1.  Local conformational variations observed in B-DNA crystals do not improve base stacking: computational analysis of base stacking in a d(CATGGGCCCATG)(2) B<-->A intermediate crystal structure.

Authors:  J Poner; J Florián; H L Ng; J E Poner; N Packová
Journal:  Nucleic Acids Res       Date:  2000-12-15       Impact factor: 16.971

2.  Structure, energetics, and dynamics of the nucleic Acid base pairs: nonempirical ab initio calculations.

Authors:  P Hobza; J Sponer
Journal:  Chem Rev       Date:  1999-11-10       Impact factor: 60.622

3.  Administration of potentially antiandrogenic pesticides (procymidone, linuron, iprodione, chlozolinate, p,p'-DDE, and ketoconazole) and toxic substances (dibutyl- and diethylhexyl phthalate, PCB 169, and ethane dimethane sulphonate) during sexual differentiation produces diverse profiles of reproductive malformations in the male rat.

Authors:  C Wolf; C Lambright; P Mann; M Price; R L Cooper; J Ostby; L E Gray
Journal:  Toxicol Ind Health       Date:  1999 Jan-Mar       Impact factor: 2.273

4.  Dispersion corrections to density functionals for water aromatic interactions.

Authors:  Urs Zimmerli; Michele Parrinello; Petros Koumoutsakos
Journal:  J Chem Phys       Date:  2004-02-08       Impact factor: 3.488

Review 5.  Comparative toxicology and mechanism of action of polychlorinated dibenzo-p-dioxins and dibenzofurans.

Authors:  S H Safe
Journal:  Annu Rev Pharmacol Toxicol       Date:  1986       Impact factor: 13.820

6.  In vitro binding of hexachlorobiphenyl to DNA and proteins.

Authors:  J F Narbonne; M Daubeze
Journal:  Toxicology       Date:  1980       Impact factor: 4.221

7.  Possible correlation between induction modes of hepatic enzymes by PCBs and their toxicity in rats.

Authors:  H Yoshimura; S Yoshihara; N Ozawa; M Miki
Journal:  Ann N Y Acad Sci       Date:  1979-05-31       Impact factor: 5.691

8.  Reactions of 2,2',5,5'-tetrachlorobiphenyl 3,4-oxide with methionine, cysteine and glutathione in relation to the formation of methylthio-metabolites of 2,2',5,5'-tetrachlorobiphenyl in the rat and mouse.

Authors:  B D Preston; J A Miller; E C Miller
Journal:  Chem Biol Interact       Date:  1984-08       Impact factor: 5.192

9.  Coplanar PCBs in fish and mussels from marine and estuarine waters of New York State.

Authors:  C S Hong; B Bush; J Xiao
Journal:  Ecotoxicol Environ Saf       Date:  1992-02       Impact factor: 6.291

10.  Accurate description of van der Waals complexes by density functional theory including empirical corrections.

Authors:  Stefan Grimme
Journal:  J Comput Chem       Date:  2004-09       Impact factor: 3.376

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