Literature DB >> 22970729

Specific metal recognition in nickel trafficking.

Khadine A Higgins1, Carolyn E Carr, Michael J Maroney.   

Abstract

Nickel is an essential metal for a number of bacterial species that have developed systems for acquiring, delivering, and incorporating the metal into target enzymes and controlling the levels of nickel in cells to prevent toxic effects. As with other transition metals, these trafficking systems must be able to distinguish between the desired metal and other transition metal ions with similar physical and chemical properties. Because there are few enzymes (targets) that require nickel for activity (e.g., Escherichia coli transports nickel for hydrogenases made under anaerobic conditions, and Helicobacter pylori requires nickel for hydrogenase and urease that are essential for acid viability), the "traffic pattern" for nickel is relatively simple, and nickel trafficking therefore presents an opportunity to examine a system for the mechanisms that are used to distinguish nickel from other metals. In this review, we describe the details known for examples of uptake permeases, metallochaperones and proteins involved in metallocenter assembly, and nickel metalloregulators. We also illustrate a variety of mechanisms, including molecular recognition in the case of NikA protein and examples of allosteric regulation for HypA, NikR, and RcnR, employed to generate specific biological responses to nickel ions.

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Year:  2012        PMID: 22970729      PMCID: PMC3502001          DOI: 10.1021/bi300981m

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  167 in total

1.  RcnB is a periplasmic protein essential for maintaining intracellular Ni and Co concentrations in Escherichia coli.

Authors:  Camille Blériot; Géraldine Effantin; Florence Lagarde; Marie-Andrée Mandrand-Berthelot; Agnès Rodrigue
Journal:  J Bacteriol       Date:  2011-06-10       Impact factor: 3.490

2.  NreB from Achromobacter xylosoxidans 31A Is a nickel-induced transporter conferring nickel resistance.

Authors:  G Grass; B Fan; B P Rosen; K Lemke; H G Schlegel; C Rensing
Journal:  J Bacteriol       Date:  2001-05       Impact factor: 3.490

3.  Holo-Ni(II)HpNikR is an asymmetric tetramer containing two different nickel-binding sites.

Authors:  Abby L West; Franz St John; Pedro E M Lopes; Alexander D MacKerell; Edwin Pozharski; Sarah L J Michel
Journal:  J Am Chem Soc       Date:  2010-10-20       Impact factor: 15.419

4.  Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect.

Authors:  Abby L West; Sarah E Evans; Javier M González; Lester G Carter; Hiro Tsuruta; Edwin Pozharski; Sarah L J Michel
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

5.  HypB protein of Bradyrhizobium japonicum is a metal-binding GTPase capable of binding 18 divalent nickel ions per dimer.

Authors:  C Fu; J W Olson; R J Maier
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

6.  Ni(II) and Co(II) sensing by Escherichia coli RcnR.

Authors:  Jeffrey S Iwig; Sharon Leitch; Robert W Herbst; Michael J Maroney; Peter T Chivers
Journal:  J Am Chem Soc       Date:  2008-05-28       Impact factor: 15.419

7.  Structural and biological analysis of the metal sites of Escherichia coli hydrogenase accessory protein HypB.

Authors:  Alistair V Dias; Cory M Mulvihill; Michael R Leach; Ingrid J Pickering; Graham N George; Deborah B Zamble
Journal:  Biochemistry       Date:  2008-10-23       Impact factor: 3.162

8.  Nickel deficiency gives rise to the defective hydrogenase phenotype of hydC and fnr mutants in Escherichia coli.

Authors:  L F Wu; M A Mandrand-Berthelot; R Waugh; C J Edmonds; S E Holt; D H Boxer
Journal:  Mol Microbiol       Date:  1989-12       Impact factor: 3.501

Review 9.  Enterobactin: an archetype for microbial iron transport.

Authors:  Kenneth N Raymond; Emily A Dertz; Sanggoo S Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-24       Impact factor: 11.205

10.  UreG, a chaperone in the urease assembly process, is an intrinsically unstructured GTPase that specifically binds Zn2+.

Authors:  Barbara Zambelli; Massimiliano Stola; Francesco Musiani; Kris De Vriendt; Bart Samyn; Bart Devreese; Jozef Van Beeumen; Paola Turano; Alexander Dikiy; Donald A Bryant; Stefano Ciurli
Journal:  J Biol Chem       Date:  2004-11-12       Impact factor: 5.157

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  18 in total

1.  Selectivity of Ni(II) and Zn(II) binding to Sporosarcina pasteurii UreE, a metallochaperone in the urease assembly: a calorimetric and crystallographic study.

Authors:  Barbara Zambelli; Katarzyna Banaszak; Anna Merloni; Agnieszka Kiliszek; Wojciech Rypniewski; Stefano Ciurli
Journal:  J Biol Inorg Chem       Date:  2013-10-15       Impact factor: 3.358

2.  Structural insights into how GTP-dependent conformational changes in a metallochaperone UreG facilitate urease maturation.

Authors:  Man Hon Yuen; Yu Hang Fong; Yap Shing Nim; Pak Ho Lau; Kam-Bo Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-04       Impact factor: 11.205

3.  Non-thiolate ligation of nickel by nucleotide-free UreG of Klebsiella aerogenes.

Authors:  Vlad Martin-Diaconescu; Crisjoe A Joseph; Jodi L Boer; Scott B Mulrooney; Robert P Hausinger; Michael J Maroney
Journal:  J Biol Inorg Chem       Date:  2016-12-21       Impact factor: 3.358

Review 4.  Biosynthesis of the urease metallocenter.

Authors:  Mark A Farrugia; Lee Macomber; Robert P Hausinger
Journal:  J Biol Chem       Date:  2013-03-28       Impact factor: 5.157

Review 5.  Nickel trafficking system responsible for urease maturation in Helicobacter pylori.

Authors:  Rui-Guang Ge; Dong-Xian Wang; Ming-Cong Hao; Xue-Song Sun
Journal:  World J Gastroenterol       Date:  2013-12-07       Impact factor: 5.742

6.  Co(II) and Ni(II) binding of the Escherichia coli transcriptional repressor RcnR orders its N terminus, alters helix dynamics, and reduces DNA affinity.

Authors:  Hsin-Ting Huang; Cedric E Bobst; Jeffrey S Iwig; Peter T Chivers; Igor A Kaltashov; Michael J Maroney
Journal:  J Biol Chem       Date:  2017-11-17       Impact factor: 5.157

Review 7.  Nickel-dependent metalloenzymes.

Authors:  Jodi L Boer; Scott B Mulrooney; Robert P Hausinger
Journal:  Arch Biochem Biophys       Date:  2013-09-10       Impact factor: 4.013

8.  Uropathogenic enterobacteria use the yersiniabactin metallophore system to acquire nickel.

Authors:  Anne E Robinson; Jessica E Lowe; Eun-Ik Koh; Jeffrey P Henderson
Journal:  J Biol Chem       Date:  2018-08-14       Impact factor: 5.157

9.  Analyzing the function of the insert region found between the α and β-subunits in the eukaryotic nitrile hydratase from Monosiga brevicollis.

Authors:  Xinhang Yang; Brian Bennett; Richard C Holz
Journal:  Arch Biochem Biophys       Date:  2018-09-08       Impact factor: 4.013

10.  Low-molecular-mass labile metal pools in Escherichia coli: advances using chromatography and mass spectrometry.

Authors:  Hayley N Brawley; Paul A Lindahl
Journal:  J Biol Inorg Chem       Date:  2021-05-08       Impact factor: 3.358

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