Literature DB >> 22969603

6-Bromo-1-methyl-4-[2-(4-nitro-benzyl-idene)hydrazin-1-yl-idene]-2,2-dioxo-3,4-dihydro-1H-2λ(6),1-benzothia-zine.

Muhammad Shafiq, William T A Harrison, Islam Ullah Khan.   

Abstract

In the title compound, C(16)H(13)BrN(4)O(4)S, the dihedral angle between the aromatic rings is 4.1 (2)° and the C=N-N=C torsion angle is 175.5 (3)°. The nitro group is almost coplanar with the benzene ring to which it is attached [dihedral angle = 2.9 (7)°]. The thia-zine ring has an S-envelope conformation with the S atom displaced by 0.819 (3) Å from the mean plane of the other five atoms (r.m.s. deviation = 0.017 Å). In the crystal, C-H⋯O inter-actions link the mol-ecules and weak aromatic π-π stacking [centroid-centroid separation = 3.874 (2) Å] is also observed.

Entities:  

Year:  2012        PMID: 22969603      PMCID: PMC3435732          DOI: 10.1107/S1600536812035374

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological activity of the title compound and related materials, see: Shafiq, Zia-ur-Rehman et al. (2011 ▶). For related structures, see: Shafiq, Khan et al. (2011 ▶); Shafiq, Harrison et al. (2012 ▶).

Experimental

Crystal data

C16H13BrN4O4S M = 437.27 Triclinic, a = 8.2772 (4) Å b = 9.0572 (4) Å c = 12.6868 (6) Å α = 87.132 (4)° β = 70.976 (3)° γ = 75.098 (2)° V = 868.32 (7) Å3 Z = 2 Mo Kα radiation μ = 2.52 mm−1 T = 296 K 0.36 × 0.09 × 0.07 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.464, T max = 0.843 17474 measured reflections 4251 independent reflections 2484 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.106 S = 1.00 4251 reflections 236 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.40 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812035374/pv2578sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035374/pv2578Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812035374/pv2578Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H13BrN4O4SZ = 2
Mr = 437.27F(000) = 440
Triclinic, P1Dx = 1.672 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.2772 (4) ÅCell parameters from 4062 reflections
b = 9.0572 (4) Åθ = 2.3–22.1°
c = 12.6868 (6) ŵ = 2.52 mm1
α = 87.132 (4)°T = 296 K
β = 70.976 (3)°Needle, yellow
γ = 75.098 (2)°0.36 × 0.09 × 0.07 mm
V = 868.32 (7) Å3
Bruker APEXII CCD diffractometer4251 independent reflections
Radiation source: fine-focus sealed tube2484 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.043
ω scansθmax = 28.4°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −11→11
Tmin = 0.464, Tmax = 0.843k = −12→12
17474 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0415P)2 + 0.5116P] where P = (Fo2 + 2Fc2)/3
4251 reflections(Δ/σ)max = 0.001
236 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.8000 (4)0.2966 (4)0.3910 (3)0.0429 (8)
C20.8376 (5)0.4239 (4)0.4267 (3)0.0591 (10)
H20.82400.43650.50170.071*
C30.8940 (5)0.5298 (4)0.3531 (3)0.0516 (9)
H30.91650.61460.37840.062*
C40.9175 (4)0.5116 (3)0.2422 (3)0.0443 (8)
C50.8801 (4)0.3880 (3)0.2041 (3)0.0385 (7)
H50.89560.37690.12870.046*
C60.8192 (4)0.2795 (3)0.2783 (2)0.0371 (7)
C70.7760 (4)0.1511 (3)0.2351 (2)0.0336 (7)
C80.7034 (4)0.0381 (4)0.3145 (2)0.0438 (8)
H8A0.7315−0.05900.27500.053*
H8B0.57570.07440.34460.053*
C90.6400 (6)0.2323 (5)0.5848 (3)0.0799 (13)
H9A0.71660.24990.62290.120*
H9B0.58740.15180.61950.120*
H9C0.54880.32420.58860.120*
C100.7637 (4)0.0248 (3)−0.0055 (3)0.0390 (7)
H100.80220.1039−0.04720.047*
C110.7208 (4)−0.0903 (3)−0.0607 (2)0.0362 (7)
C120.6593 (4)−0.2102 (4)−0.0032 (2)0.0413 (7)
H120.6451−0.21870.07240.050*
C130.6194 (4)−0.3163 (4)−0.0580 (3)0.0454 (8)
H130.5775−0.3964−0.01990.054*
C140.6428 (4)−0.3016 (4)−0.1703 (3)0.0404 (7)
C150.7034 (4)−0.1855 (4)−0.2294 (3)0.0431 (8)
H150.7184−0.1782−0.30520.052*
C160.7415 (4)−0.0794 (4)−0.1731 (2)0.0414 (8)
H160.78200.0010−0.21160.050*
S10.79259 (11)0.01247 (9)0.42342 (6)0.0432 (2)
O10.9788 (3)−0.0430 (3)0.37576 (19)0.0558 (6)
O20.7010 (3)−0.0721 (3)0.50933 (18)0.0569 (6)
O30.6135 (4)−0.3959 (3)−0.3268 (2)0.0759 (8)
O40.5483 (5)−0.5195 (3)−0.1767 (3)0.0898 (10)
N10.7408 (4)0.1889 (3)0.4696 (2)0.0498 (7)
N20.7990 (3)0.1447 (3)0.1299 (2)0.0404 (6)
N30.7509 (3)0.0216 (3)0.0964 (2)0.0396 (6)
N40.5998 (4)−0.4145 (4)−0.2289 (3)0.0559 (8)
Br11.00058 (6)0.65482 (4)0.13996 (3)0.06700 (17)
U11U22U33U12U13U23
C10.048 (2)0.0466 (19)0.0369 (18)−0.0160 (15)−0.0144 (15)−0.0020 (15)
C20.076 (3)0.063 (2)0.046 (2)−0.022 (2)−0.0239 (19)−0.0153 (18)
C30.069 (2)0.0375 (18)0.058 (2)−0.0180 (17)−0.0296 (18)−0.0092 (16)
C40.051 (2)0.0363 (17)0.052 (2)−0.0126 (15)−0.0240 (16)0.0005 (15)
C50.0415 (19)0.0375 (16)0.0399 (18)−0.0096 (14)−0.0175 (14)−0.0018 (14)
C60.0370 (18)0.0389 (17)0.0387 (17)−0.0117 (14)−0.0143 (13)−0.0046 (13)
C70.0338 (17)0.0365 (16)0.0320 (17)−0.0101 (13)−0.0115 (13)−0.0018 (13)
C80.050 (2)0.0496 (19)0.0379 (18)−0.0230 (16)−0.0139 (15)0.0011 (15)
C90.094 (3)0.081 (3)0.046 (2)−0.023 (2)0.006 (2)−0.013 (2)
C100.0408 (19)0.0436 (17)0.0361 (18)−0.0185 (14)−0.0109 (14)0.0002 (14)
C110.0338 (17)0.0423 (17)0.0352 (17)−0.0125 (13)−0.0121 (13)−0.0018 (13)
C120.049 (2)0.0495 (19)0.0304 (17)−0.0177 (15)−0.0161 (14)0.0016 (14)
C130.056 (2)0.0424 (18)0.046 (2)−0.0217 (16)−0.0201 (16)0.0032 (15)
C140.0412 (19)0.0451 (18)0.0381 (18)−0.0107 (15)−0.0158 (14)−0.0079 (14)
C150.0395 (19)0.060 (2)0.0315 (17)−0.0118 (16)−0.0128 (14)−0.0055 (15)
C160.0431 (19)0.0498 (19)0.0353 (18)−0.0197 (15)−0.0123 (14)0.0032 (14)
S10.0471 (5)0.0504 (5)0.0333 (4)−0.0180 (4)−0.0110 (3)0.0065 (4)
O10.0443 (15)0.0642 (15)0.0522 (14)−0.0085 (11)−0.0126 (11)0.0132 (12)
O20.0661 (17)0.0680 (16)0.0400 (13)−0.0306 (13)−0.0132 (11)0.0155 (11)
O30.100 (2)0.091 (2)0.0488 (17)−0.0368 (17)−0.0284 (15)−0.0191 (15)
O40.143 (3)0.076 (2)0.085 (2)−0.063 (2)−0.055 (2)0.0059 (17)
N10.064 (2)0.0584 (18)0.0280 (14)−0.0241 (15)−0.0083 (12)−0.0028 (12)
N20.0479 (17)0.0391 (14)0.0405 (16)−0.0188 (12)−0.0163 (12)−0.0023 (12)
N30.0482 (16)0.0375 (14)0.0382 (16)−0.0167 (12)−0.0157 (12)−0.0036 (11)
N40.058 (2)0.060 (2)0.057 (2)−0.0167 (16)−0.0241 (15)−0.0144 (16)
Br10.0932 (4)0.0392 (2)0.0830 (3)−0.0297 (2)−0.0394 (2)0.01409 (18)
C1—C61.398 (4)C10—N31.262 (4)
C1—C21.400 (4)C10—C111.459 (4)
C1—N11.420 (4)C10—H100.9300
C2—C31.367 (5)C11—C161.380 (4)
C2—H20.9300C11—C121.391 (4)
C3—C41.368 (4)C12—C131.376 (4)
C3—H30.9300C12—H120.9300
C4—C51.382 (4)C13—C141.379 (4)
C4—Br11.884 (3)C13—H130.9300
C5—C61.400 (4)C14—C151.366 (4)
C5—H50.9300C14—N41.470 (4)
C6—C71.478 (4)C15—C161.381 (4)
C7—N21.288 (4)C15—H150.9300
C7—C81.497 (4)C16—H160.9300
C8—S11.748 (3)S1—O11.420 (2)
C8—H8A0.9700S1—O21.423 (2)
C8—H8B0.9700S1—N11.631 (3)
C9—N11.443 (4)O3—N41.217 (4)
C9—H9A0.9600O4—N41.219 (4)
C9—H9B0.9600N2—N31.402 (3)
C9—H9C0.9600
C6—C1—C2119.1 (3)N3—C10—H10118.6
C6—C1—N1121.3 (3)C11—C10—H10118.6
C2—C1—N1119.7 (3)C16—C11—C12119.2 (3)
C3—C2—C1121.0 (3)C16—C11—C10119.0 (3)
C3—C2—H2119.5C12—C11—C10121.8 (3)
C1—C2—H2119.5C13—C12—C11120.2 (3)
C2—C3—C4120.2 (3)C13—C12—H12119.9
C2—C3—H3119.9C11—C12—H12119.9
C4—C3—H3119.9C12—C13—C14118.7 (3)
C3—C4—C5120.3 (3)C12—C13—H13120.6
C3—C4—Br1120.3 (2)C14—C13—H13120.6
C5—C4—Br1119.3 (2)C15—C14—C13122.6 (3)
C4—C5—C6120.4 (3)C15—C14—N4118.6 (3)
C4—C5—H5119.8C13—C14—N4118.8 (3)
C6—C5—H5119.8C14—C15—C16117.9 (3)
C1—C6—C5118.9 (3)C14—C15—H15121.0
C1—C6—C7122.2 (3)C16—C15—H15121.0
C5—C6—C7118.9 (3)C11—C16—C15121.3 (3)
N2—C7—C6117.6 (3)C11—C16—H16119.3
N2—C7—C8123.0 (2)C15—C16—H16119.3
C6—C7—C8119.4 (2)O1—S1—O2118.22 (15)
C7—C8—S1110.5 (2)O1—S1—N1110.53 (15)
C7—C8—H8A109.6O2—S1—N1108.09 (14)
S1—C8—H8A109.6O1—S1—C8107.65 (15)
C7—C8—H8B109.6O2—S1—C8110.70 (14)
S1—C8—H8B109.6N1—S1—C8100.17 (15)
H8A—C8—H8B108.1C1—N1—C9122.1 (3)
N1—C9—H9A109.5C1—N1—S1116.7 (2)
N1—C9—H9B109.5C9—N1—S1121.3 (2)
H9A—C9—H9B109.5C7—N2—N3113.8 (2)
N1—C9—H9C109.5C10—N3—N2112.1 (2)
H9A—C9—H9C109.5O3—N4—O4123.4 (3)
H9B—C9—H9C109.5O3—N4—C14117.9 (3)
N3—C10—C11122.9 (3)O4—N4—C14118.7 (3)
C6—C1—C2—C3−0.6 (5)C13—C14—C15—C16−0.2 (5)
N1—C1—C2—C3−179.7 (3)N4—C14—C15—C16179.3 (3)
C1—C2—C3—C4−1.1 (6)C12—C11—C16—C15−0.3 (5)
C2—C3—C4—C51.7 (5)C10—C11—C16—C15179.8 (3)
C2—C3—C4—Br1−178.5 (3)C14—C15—C16—C110.5 (5)
C3—C4—C5—C6−0.5 (5)C7—C8—S1—O1−60.1 (3)
Br1—C4—C5—C6179.6 (2)C7—C8—S1—O2169.3 (2)
C2—C1—C6—C51.7 (5)C7—C8—S1—N155.4 (2)
N1—C1—C6—C5−179.2 (3)C6—C1—N1—C9−149.0 (4)
C2—C1—C6—C7−177.8 (3)C2—C1—N1—C930.0 (5)
N1—C1—C6—C71.2 (5)C6—C1—N1—S131.0 (4)
C4—C5—C6—C1−1.2 (5)C2—C1—N1—S1−149.9 (3)
C4—C5—C6—C7178.4 (3)O1—S1—N1—C157.5 (3)
C1—C6—C7—N2−179.6 (3)O2—S1—N1—C1−171.7 (2)
C5—C6—C7—N20.8 (4)C8—S1—N1—C1−55.9 (3)
C1—C6—C7—C82.2 (4)O1—S1—N1—C9−122.5 (3)
C5—C6—C7—C8−177.4 (3)O2—S1—N1—C98.3 (4)
N2—C7—C8—S1148.6 (3)C8—S1—N1—C9124.2 (3)
C6—C7—C8—S1−33.3 (4)C6—C7—N2—N3−178.5 (3)
N3—C10—C11—C16−178.9 (3)C8—C7—N2—N3−0.4 (4)
N3—C10—C11—C121.2 (5)C11—C10—N3—N2−179.8 (3)
C16—C11—C12—C13−0.1 (5)C7—N2—N3—C10175.5 (3)
C10—C11—C12—C13179.7 (3)C15—C14—N4—O3−2.8 (5)
C11—C12—C13—C140.4 (5)C13—C14—N4—O3176.7 (3)
C12—C13—C14—C15−0.3 (5)C15—C14—N4—O4178.9 (3)
C12—C13—C14—N4−179.8 (3)C13—C14—N4—O4−1.6 (5)
D—H···AD—HH···AD···AD—H···A
C2—H2···O3i0.932.563.325 (4)139
C8—H8B···O2ii0.972.443.310 (4)150
C13—H13···O4iii0.932.533.306 (5)141
C15—H15···O2iv0.932.533.426 (4)162
C16—H16···O1v0.932.453.218 (4)139
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2⋯O3i 0.932.563.325 (4)139
C8—H8B⋯O2ii 0.972.443.310 (4)150
C13—H13⋯O4iii 0.932.533.306 (5)141
C15—H15⋯O2iv 0.932.533.426 (4)162
C16—H16⋯O1v 0.932.453.218 (4)139

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  6-Bromo-1-methyl-4-[2-(4-methyl-benzyl-idene)hydrazinyl-idene]-3H-2λ,1-benzothia-zine-2,2-dione.

Authors:  Muhammad Shafiq; Islam Ullah Khan; Muhammad Zia-Ur-Rehman; Muhammad Nadeem Arshad; Abdullah M Asiri
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-23

3.  2-{[2-(1-Methyl-2,2-dioxo-3,4-dihydro-1H-2λ(6),1-benzothia-zin-4-yl-idene)hydrazin-1-yl-idene]meth-yl}phenol.

Authors:  Muhammad Shafiq; William T A Harrison; Islam Ullah Khan; Iftikhar Hussain Bukhari; Tanveer Hussain Bokhari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-04
  3 in total

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