Literature DB >> 22969542

2-{[2-(1-Methyl-2,2-dioxo-3,4-dihydro-1H-2λ(6),1-benzothia-zin-4-yl-idene)hydrazin-1-yl-idene]meth-yl}phenol.

Muhammad Shafiq, William T A Harrison, Islam Ullah Khan, Iftikhar Hussain Bukhari, Tanveer Hussain Bokhari.   

Abstract

In the title compound, C(16)H(15)N(3)O(3)S, the dihedral angle between the aromatic rings is 8.18 (11)° and the C=N-N=C torsion angle is 178.59 (14)°. The conformation of the thia-zine ring is an envelope, with the S atom displaced by 0.8157 (18) Å from the mean plane of the other five atoms (r.m.s. deviation = 0.045 Å). An intra-molecular O-H⋯N hydrogen bond closes an S(6) ring. In the crystal, weak C-H⋯O inter-actions link the mol-ecules, with all three O atoms acting as acceptors.

Entities:  

Year:  2012        PMID: 22969542      PMCID: PMC3435671          DOI: 10.1107/S1600536812034101

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological activity of the title compound and related materials, see: Shafiq et al. (2011 ▶).

Experimental

Crystal data

C16H15N3O3S M = 329.37 Monoclinic, a = 6.5530 (2) Å b = 15.8719 (5) Å c = 14.5804 (4) Å β = 91.147 (1)° V = 1516.18 (8) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 296 K 0.40 × 0.05 × 0.05 mm

Data collection

Bruker APEXII CCD diffractometer 14391 measured reflections 3778 independent reflections 3019 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.114 S = 1.03 3778 reflections 212 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.32 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: ORTEP-3 (Farrugia, 1997 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812034101/bt5989sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812034101/bt5989Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812034101/bt5989Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15N3O3SF(000) = 688
Mr = 329.37Dx = 1.443 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6831 reflections
a = 6.5530 (2) Åθ = 2.8–28.2°
b = 15.8719 (5) ŵ = 0.23 mm1
c = 14.5804 (4) ÅT = 296 K
β = 91.147 (1)°Needle, yellow
V = 1516.18 (8) Å30.40 × 0.05 × 0.05 mm
Z = 4
Bruker APEXII CCD diffractometer3019 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.020
Graphite monochromatorθmax = 28.4°, θmin = 2.6°
φ and ω scansh = −8→8
14391 measured reflectionsk = −21→20
3778 independent reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0577P)2 + 0.5143P] where P = (Fo2 + 2Fc2)/3
3778 reflections(Δ/σ)max = 0.001
212 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5578 (3)0.63906 (15)0.45564 (14)0.0583 (5)
H1A0.55920.69230.42450.087*
H1B0.50770.59630.41440.087*
H1C0.69390.62500.47600.087*
C20.4661 (2)0.70248 (9)0.60704 (10)0.0323 (3)
C30.6391 (2)0.75336 (11)0.60255 (12)0.0418 (4)
H3A0.72280.74980.55190.050*
C40.6875 (3)0.80886 (11)0.67218 (12)0.0453 (4)
H40.80390.84200.66830.054*
C50.5651 (3)0.81578 (11)0.74765 (12)0.0436 (4)
H50.59730.85380.79420.052*
C60.3944 (2)0.76554 (10)0.75302 (11)0.0384 (3)
H60.31270.76990.80420.046*
C70.3401 (2)0.70828 (9)0.68407 (10)0.0318 (3)
C80.1578 (2)0.65501 (9)0.69491 (10)0.0323 (3)
C90.1241 (3)0.58446 (12)0.62738 (11)0.0470 (4)
H9A−0.01770.56700.62800.056*
H9B0.20800.53660.64500.056*
C10−0.2398 (2)0.63187 (10)0.83713 (11)0.0375 (3)
H10−0.20250.67610.87580.045*
C11−0.4218 (2)0.58389 (10)0.85695 (10)0.0357 (3)
C12−0.4875 (2)0.51625 (10)0.80224 (11)0.0383 (3)
C13−0.6624 (3)0.47198 (12)0.82474 (13)0.0490 (4)
H13−0.70450.42630.78910.059*
C14−0.7732 (3)0.49541 (13)0.89940 (15)0.0566 (5)
H14−0.89050.46570.91380.068*
C15−0.7125 (3)0.56253 (13)0.95334 (14)0.0584 (5)
H15−0.78890.57821.00360.070*
C16−0.5388 (3)0.60604 (12)0.93243 (12)0.0474 (4)
H16−0.49790.65110.96910.057*
S10.18651 (6)0.61737 (3)0.51673 (2)0.03890 (13)
N10.42477 (18)0.64443 (9)0.53490 (9)0.0382 (3)
N20.03875 (19)0.67010 (8)0.76209 (9)0.0378 (3)
N3−0.12812 (19)0.61537 (8)0.76789 (9)0.0374 (3)
O10.06395 (19)0.68861 (10)0.49308 (9)0.0581 (4)
O20.1846 (2)0.54798 (10)0.45479 (9)0.0610 (4)
O3−0.3885 (2)0.49217 (9)0.72635 (9)0.0557 (4)
H3−0.285 (4)0.5240 (15)0.7235 (16)0.067*
U11U22U33U12U13U23
C10.0359 (8)0.0874 (14)0.0524 (11)−0.0090 (9)0.0175 (7)−0.0246 (10)
C20.0275 (6)0.0353 (7)0.0342 (7)−0.0008 (5)0.0019 (5)0.0000 (6)
C30.0329 (7)0.0478 (9)0.0448 (9)−0.0081 (6)0.0076 (6)−0.0008 (7)
C40.0379 (8)0.0441 (9)0.0537 (10)−0.0121 (7)0.0005 (7)0.0002 (8)
C50.0475 (9)0.0395 (8)0.0437 (9)−0.0083 (7)−0.0031 (7)−0.0046 (7)
C60.0411 (8)0.0380 (8)0.0363 (8)−0.0042 (6)0.0048 (6)−0.0022 (6)
C70.0294 (6)0.0327 (7)0.0335 (7)−0.0012 (5)0.0025 (5)0.0028 (6)
C80.0323 (7)0.0351 (7)0.0297 (7)−0.0033 (6)0.0024 (5)0.0026 (6)
C90.0585 (10)0.0508 (10)0.0323 (8)−0.0227 (8)0.0126 (7)−0.0050 (7)
C100.0363 (7)0.0381 (8)0.0383 (8)−0.0018 (6)0.0072 (6)0.0000 (6)
C110.0341 (7)0.0371 (8)0.0362 (7)0.0011 (6)0.0087 (6)0.0045 (6)
C120.0389 (8)0.0383 (8)0.0381 (8)0.0004 (6)0.0059 (6)0.0039 (6)
C130.0463 (9)0.0464 (9)0.0543 (10)−0.0108 (8)0.0046 (8)0.0018 (8)
C140.0418 (9)0.0618 (12)0.0668 (12)−0.0125 (8)0.0164 (8)0.0091 (10)
C150.0516 (10)0.0650 (12)0.0598 (11)−0.0021 (9)0.0295 (9)0.0004 (10)
C160.0485 (9)0.0491 (10)0.0453 (9)−0.0028 (8)0.0171 (7)−0.0049 (7)
S10.03155 (19)0.0558 (3)0.0296 (2)−0.01232 (16)0.00564 (13)−0.00418 (16)
N10.0279 (6)0.0499 (8)0.0371 (7)−0.0062 (5)0.0078 (5)−0.0085 (6)
N20.0333 (6)0.0401 (7)0.0403 (7)−0.0054 (5)0.0083 (5)−0.0013 (5)
N30.0331 (6)0.0396 (7)0.0397 (7)−0.0053 (5)0.0084 (5)0.0011 (5)
O10.0377 (6)0.0885 (10)0.0479 (7)0.0080 (6)−0.0021 (5)0.0094 (7)
O20.0638 (8)0.0775 (9)0.0423 (7)−0.0335 (7)0.0167 (6)−0.0228 (6)
O30.0623 (8)0.0551 (8)0.0505 (7)−0.0147 (6)0.0214 (6)−0.0147 (6)
C1—N11.4641 (19)C9—H9B0.9700
C1—H1A0.9600C10—N31.286 (2)
C1—H1B0.9600C10—C111.449 (2)
C1—H1C0.9600C10—H100.9300
C2—C31.394 (2)C11—C161.399 (2)
C2—C71.4104 (19)C11—C121.400 (2)
C2—N11.4203 (19)C12—O31.349 (2)
C3—C41.376 (2)C12—C131.389 (2)
C3—H3A0.9300C13—C141.372 (3)
C4—C51.379 (2)C13—H130.9300
C4—H40.9300C14—C151.378 (3)
C5—C61.377 (2)C14—H140.9300
C5—H50.9300C15—C161.371 (3)
C6—C71.396 (2)C15—H150.9300
C6—H60.9300C16—H160.9300
C7—C81.4745 (19)S1—O21.4242 (13)
C8—N21.2870 (19)S1—O11.4252 (15)
C8—C91.504 (2)S1—N11.6358 (13)
C9—S11.7519 (16)N2—N31.4004 (17)
C9—H9A0.9700O3—H30.85 (2)
N1—C1—H1A109.5N3—C10—C11122.22 (15)
N1—C1—H1B109.5N3—C10—H10118.9
H1A—C1—H1B109.5C11—C10—H10118.9
N1—C1—H1C109.5C16—C11—C12118.29 (14)
H1A—C1—H1C109.5C16—C11—C10119.41 (15)
H1B—C1—H1C109.5C12—C11—C10122.30 (14)
C3—C2—C7119.28 (14)O3—C12—C13117.56 (16)
C3—C2—N1118.96 (13)O3—C12—C11122.50 (14)
C7—C2—N1121.73 (13)C13—C12—C11119.93 (15)
C4—C3—C2120.75 (15)C14—C13—C12120.17 (17)
C4—C3—H3A119.6C14—C13—H13119.9
C2—C3—H3A119.6C12—C13—H13119.9
C3—C4—C5120.71 (15)C13—C14—C15120.74 (16)
C3—C4—H4119.6C13—C14—H14119.6
C5—C4—H4119.6C15—C14—H14119.6
C6—C5—C4119.02 (15)C16—C15—C14119.59 (17)
C6—C5—H5120.5C16—C15—H15120.2
C4—C5—H5120.5C14—C15—H15120.2
C5—C6—C7122.12 (15)C15—C16—C11121.26 (17)
C5—C6—H6118.9C15—C16—H16119.4
C7—C6—H6118.9C11—C16—H16119.4
C6—C7—C2118.11 (13)O2—S1—O1117.53 (9)
C6—C7—C8119.44 (13)O2—S1—N1107.57 (8)
C2—C7—C8122.44 (13)O1—S1—N1111.25 (8)
N2—C8—C7118.66 (13)O2—S1—C9110.74 (8)
N2—C8—C9123.59 (13)O1—S1—C9108.58 (9)
C7—C8—C9117.74 (13)N1—S1—C999.72 (8)
C8—C9—S1110.29 (11)C2—N1—C1120.96 (13)
C8—C9—H9A109.6C2—N1—S1117.24 (10)
S1—C9—H9A109.6C1—N1—S1116.01 (11)
C8—C9—H9B109.6C8—N2—N3114.62 (13)
S1—C9—H9B109.6C10—N3—N2112.24 (13)
H9A—C9—H9B108.1C12—O3—H3105.7 (16)
C7—C2—C3—C40.0 (2)C11—C12—C13—C141.3 (3)
N1—C2—C3—C4−178.31 (15)C12—C13—C14—C15−0.4 (3)
C2—C3—C4—C5−0.5 (3)C13—C14—C15—C16−0.4 (3)
C3—C4—C5—C60.8 (3)C14—C15—C16—C110.3 (3)
C4—C5—C6—C7−0.6 (3)C12—C11—C16—C150.6 (3)
C5—C6—C7—C20.1 (2)C10—C11—C16—C15179.69 (18)
C5—C6—C7—C8178.70 (15)C8—C9—S1—O2171.30 (12)
C3—C2—C7—C60.2 (2)C8—C9—S1—O1−58.26 (15)
N1—C2—C7—C6178.42 (14)C8—C9—S1—N158.19 (14)
C3—C2—C7—C8−178.33 (14)C3—C2—N1—C1−1.5 (2)
N1—C2—C7—C8−0.1 (2)C7—C2—N1—C1−179.75 (16)
C6—C7—C8—N28.8 (2)C3—C2—N1—S1−153.63 (13)
C2—C7—C8—N2−172.73 (14)C7—C2—N1—S128.14 (19)
C6—C7—C8—C9−169.98 (15)O2—S1—N1—C2−169.05 (12)
C2—C7—C8—C98.5 (2)O1—S1—N1—C260.90 (13)
N2—C8—C9—S1141.30 (14)C9—S1—N1—C2−53.51 (14)
C7—C8—C9—S1−40.03 (19)O2—S1—N1—C137.45 (16)
N3—C10—C11—C16−178.83 (16)O1—S1—N1—C1−92.59 (15)
N3—C10—C11—C120.2 (2)C9—S1—N1—C1152.99 (15)
C16—C11—C12—O3177.69 (16)C7—C8—N2—N3−178.86 (12)
C10—C11—C12—O3−1.4 (2)C9—C8—N2—N3−0.2 (2)
C16—C11—C12—C13−1.4 (2)C11—C10—N3—N2179.66 (14)
C10—C11—C12—C13179.55 (15)C8—N2—N3—C10178.59 (14)
O3—C12—C13—C14−177.81 (18)
D—H···AD—HH···AD···AD—H···A
O3—H3···N30.85 (2)1.89 (2)2.6574 (18)151 (2)
C1—H1B···O3i0.962.593.534 (3)166
C3—H3A···O1ii0.932.603.396 (2)144
C9—H9A···O2i0.972.443.138 (2)129
C16—H16···O1iii0.932.603.440 (2)151
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3⋯N30.85 (2)1.89 (2)2.6574 (18)151 (2)
C1—H1B⋯O3i 0.962.593.534 (3)166
C3—H3A⋯O1ii 0.932.603.396 (2)144
C9—H9A⋯O2i 0.972.443.138 (2)129
C16—H16⋯O1iii 0.932.603.440 (2)151

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  2 in total
  2 in total

1.  6-Bromo-1-methyl-4-[2-(4-nitro-benzyl-idene)hydrazin-1-yl-idene]-2,2-dioxo-3,4-dihydro-1H-2λ(6),1-benzothia-zine.

Authors:  Muhammad Shafiq; William T A Harrison; Islam Ullah Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-15

2.  (4Z)-1-Methyl-4-[(2E)-2-(4-methyl-benzyl-idene)hydrazin-1-yl-idene]-3,4-dihydro-1H-2λ(6),1-benzothia-zine-2,2-dione.

Authors:  Muhammad Shafiq; William T A Harrison; Islam Ullah Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-22
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.