| Literature DB >> 22969449 |
Jun-Long Mi1, Jing Huang, Hong-Ji Chen.
Abstract
In the title compound, {[Ho(2)(C(6)H(4)NO(3))(2)(C(2)O(4))(2)(H(2)O)(2)]·2H(2)O}(n), the Ho(III) atom is coordinated by three O atoms from three 5-hy-droxy-nicotinate ligands, four O atoms from two oxalate ligands, each lying on an inversion center, and one water mol-ecule in a distorted square-anti-prismatic geometry. The 5-hy-droxy-nicotinate ligand is protonated at the N atom and deprotonated at the hy-droxy group. The Ho(III) atoms are bridged by the carboxyl-ate and phenolate O atoms, forming a three-dimensional framework. N-H⋯O and O-H⋯O hydrogen bonds, as well as π-π inter-actions between the pyridine rings [centroid-centroid distance = 3.794 (2) Å], are observed.Entities:
Year: 2012 PMID: 22969449 PMCID: PMC3435576 DOI: 10.1107/S1600536812032916
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ho2(C6H4NO3)2(C2O4)2(H2O)2]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4550 reflections | |
| θ = 2.3–27.0° | |
| µ = 7.30 mm−1 | |
| α = 110.912 (3)° | |
| β = 96.862 (3)° | Block, colorless |
| γ = 95.770 (3)° | 0.18 × 0.16 × 0.06 mm |
| Bruker APEXII CCD diffractometer | 2295 independent reflections |
| Radiation source: fine-focus sealed tube | 2160 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 27.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4550 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2295 reflections | (Δ/σ)max = 0.001 |
| 192 parameters | Δρmax = 0.57 e Å−3 |
| 5 restraints | Δρmin = −0.49 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.6934 (4) | 1.2898 (4) | 1.1270 (3) | 0.0109 (5) | |
| C2 | 0.7746 (4) | 0.4547 (4) | 0.2648 (3) | 0.0123 (6) | |
| C3 | 0.7041 (4) | 0.5062 (4) | 0.3987 (3) | 0.0117 (6) | |
| H3 | 0.5989 | 0.4387 | 0.4032 | 0.014* | |
| C4 | 0.7864 (4) | 0.6576 (4) | 0.5285 (3) | 0.0124 (6) | |
| C5 | 0.9393 (4) | 0.7518 (4) | 0.5123 (3) | 0.0158 (6) | |
| H5 | 0.9999 | 0.8543 | 0.5962 | 0.019* | |
| C6 | 0.9258 (4) | 0.5562 (4) | 0.2565 (4) | 0.0162 (6) | |
| H6 | 0.9743 | 0.5245 | 0.1651 | 0.019* | |
| C7 | 0.9532 (4) | 0.9560 (4) | 1.0490 (3) | 0.0106 (6) | |
| C8 | 0.4187 (4) | 0.9302 (4) | 0.4887 (3) | 0.0116 (6) | |
| Ho1 | 0.647369 (16) | 0.971506 (16) | 0.803507 (14) | 0.00854 (5) | |
| N1 | 1.0014 (3) | 0.6993 (4) | 0.3802 (3) | 0.0168 (5) | |
| O1 | 0.7614 (3) | 1.2593 (3) | 1.0082 (2) | 0.0162 (5) | |
| O2 | 0.4346 (3) | 0.8128 (3) | 0.8643 (2) | 0.0136 (4) | |
| O3 | 0.7231 (3) | 0.7072 (3) | 0.6565 (2) | 0.0150 (4) | |
| O4 | 0.7922 (3) | 0.8943 (3) | 1.0004 (2) | 0.0133 (4) | |
| O5 | 0.9595 (3) | 1.0464 (3) | 0.8342 (2) | 0.0123 (4) | |
| O6 | 0.4182 (3) | 0.8477 (3) | 0.5761 (2) | 0.0161 (4) | |
| O7 | 0.7033 (3) | 1.0868 (3) | 0.6190 (2) | 0.0135 (4) | |
| O8 | 0.4335 (3) | 1.1739 (3) | 0.8101 (3) | 0.0197 (5) | |
| O9 | 0.3549 (5) | 0.5133 (4) | 0.1651 (4) | 0.0462 (8) | |
| H1 | 1.102 (3) | 0.760 (4) | 0.373 (4) | 0.011 (8)* | |
| H7 | 0.489 (6) | 1.275 (4) | 0.822 (6) | 0.061 (17)* | |
| H8 | 0.363 (6) | 1.155 (7) | 0.866 (5) | 0.065 (17)* | |
| H9 | 0.331 (8) | 0.448 (7) | 0.216 (6) | 0.08 (2)* | |
| H10 | 0.269 (6) | 0.501 (9) | 0.096 (5) | 0.09 (2)* |
| C1 | 0.0095 (13) | 0.0105 (13) | 0.0124 (14) | 0.0018 (10) | 0.0013 (10) | 0.0039 (11) |
| C2 | 0.0128 (14) | 0.0109 (14) | 0.0113 (14) | 0.0000 (11) | 0.0015 (11) | 0.0027 (11) |
| C3 | 0.0087 (14) | 0.0118 (14) | 0.0147 (14) | 0.0008 (10) | 0.0034 (11) | 0.0046 (11) |
| C4 | 0.0136 (14) | 0.0110 (14) | 0.0126 (14) | 0.0038 (11) | 0.0029 (11) | 0.0037 (11) |
| C5 | 0.0135 (15) | 0.0159 (15) | 0.0141 (15) | −0.0008 (11) | 0.0017 (11) | 0.0020 (12) |
| C6 | 0.0149 (15) | 0.0161 (15) | 0.0143 (15) | −0.0008 (12) | 0.0039 (11) | 0.0020 (12) |
| C7 | 0.0123 (14) | 0.0095 (13) | 0.0088 (13) | 0.0042 (11) | 0.0022 (10) | 0.0012 (11) |
| C8 | 0.0096 (14) | 0.0128 (14) | 0.0115 (14) | 0.0002 (11) | 0.0017 (10) | 0.0038 (11) |
| Ho1 | 0.00804 (7) | 0.00981 (7) | 0.00735 (7) | −0.00004 (5) | −0.00004 (4) | 0.00353 (5) |
| N1 | 0.0126 (13) | 0.0181 (13) | 0.0151 (13) | −0.0051 (10) | 0.0041 (10) | 0.0022 (11) |
| O1 | 0.0163 (11) | 0.0151 (11) | 0.0127 (10) | −0.0024 (8) | 0.0061 (8) | −0.0002 (9) |
| O2 | 0.0108 (10) | 0.0137 (10) | 0.0141 (10) | −0.0019 (8) | −0.0005 (8) | 0.0045 (8) |
| O3 | 0.0173 (11) | 0.0149 (10) | 0.0106 (10) | 0.0019 (8) | 0.0050 (8) | 0.0015 (8) |
| O4 | 0.0108 (10) | 0.0185 (11) | 0.0109 (10) | 0.0007 (8) | 0.0001 (8) | 0.0069 (8) |
| O5 | 0.0105 (10) | 0.0159 (10) | 0.0101 (10) | 0.0012 (8) | 0.0004 (8) | 0.0052 (8) |
| O6 | 0.0170 (11) | 0.0165 (11) | 0.0148 (11) | −0.0054 (8) | −0.0047 (8) | 0.0103 (9) |
| O7 | 0.0108 (10) | 0.0189 (11) | 0.0115 (10) | −0.0019 (8) | −0.0010 (8) | 0.0086 (8) |
| O8 | 0.0220 (13) | 0.0232 (13) | 0.0201 (12) | 0.0096 (10) | 0.0087 (9) | 0.0122 (10) |
| O9 | 0.056 (2) | 0.0259 (15) | 0.055 (2) | 0.0023 (14) | −0.0118 (17) | 0.0206 (15) |
| C1—O2i | 1.259 (4) | C8—O6 | 1.235 (4) |
| C1—O1 | 1.260 (4) | C8—O7v | 1.269 (3) |
| C1—C2ii | 1.507 (4) | C8—C8v | 1.545 (6) |
| C2—C3 | 1.388 (4) | Ho1—O2 | 2.245 (2) |
| C2—C6 | 1.390 (4) | Ho1—O3 | 2.271 (2) |
| C2—C1iii | 1.507 (4) | Ho1—O7 | 2.322 (2) |
| C3—C4 | 1.414 (4) | Ho1—O4 | 2.372 (2) |
| C3—H3 | 0.9500 | Ho1—O5 | 2.399 (2) |
| C4—O3 | 1.311 (4) | Ho1—O1 | 2.429 (2) |
| C4—C5 | 1.400 (4) | Ho1—O8 | 2.435 (2) |
| C5—N1 | 1.340 (4) | Ho1—O6 | 2.455 (2) |
| C5—H5 | 0.9500 | N1—H1 | 0.90 (1) |
| C6—N1 | 1.337 (4) | O8—H7 | 0.85 (1) |
| C6—H6 | 0.9500 | O8—H8 | 0.85 (1) |
| C7—O5iv | 1.237 (3) | O9—H9 | 0.85 (1) |
| C7—O4 | 1.266 (4) | O9—H10 | 0.85 (1) |
| C7—C7iv | 1.559 (6) | ||
| O2i—C1—O1 | 123.0 (3) | O4—Ho1—O5 | 68.67 (7) |
| O2i—C1—C2ii | 119.6 (3) | O2—Ho1—O1 | 112.36 (7) |
| O1—C1—C2ii | 117.4 (3) | O3—Ho1—O1 | 143.48 (8) |
| C3—C2—C6 | 119.6 (3) | O7—Ho1—O1 | 91.68 (7) |
| C3—C2—C1iii | 122.1 (3) | O4—Ho1—O1 | 75.80 (7) |
| C6—C2—C1iii | 118.3 (3) | O5—Ho1—O1 | 67.35 (7) |
| C2—C3—C4 | 121.0 (3) | O2—Ho1—O8 | 83.88 (8) |
| C2—C3—H3 | 119.5 | O3—Ho1—O8 | 142.95 (8) |
| C4—C3—H3 | 119.5 | O7—Ho1—O8 | 75.53 (8) |
| O3—C4—C5 | 121.8 (3) | O4—Ho1—O8 | 130.78 (7) |
| O3—C4—C3 | 122.0 (3) | O5—Ho1—O8 | 126.55 (8) |
| C5—C4—C3 | 116.2 (3) | O1—Ho1—O8 | 71.62 (8) |
| N1—C5—C4 | 120.9 (3) | O2—Ho1—O6 | 74.25 (7) |
| N1—C5—H5 | 119.5 | O3—Ho1—O6 | 74.55 (8) |
| C4—C5—H5 | 119.5 | O7—Ho1—O6 | 68.06 (7) |
| N1—C6—C2 | 118.5 (3) | O4—Ho1—O6 | 141.48 (7) |
| N1—C6—H6 | 120.7 | O5—Ho1—O6 | 132.12 (7) |
| C2—C6—H6 | 120.7 | O1—Ho1—O6 | 138.53 (7) |
| O5iv—C7—O4 | 126.2 (3) | O8—Ho1—O6 | 68.47 (8) |
| O5iv—C7—C7iv | 118.1 (3) | C6—N1—C5 | 123.8 (3) |
| O4—C7—C7iv | 115.7 (3) | C6—N1—H1 | 117 (2) |
| O6—C8—O7v | 126.3 (3) | C5—N1—H1 | 119 (2) |
| O6—C8—C8v | 118.0 (3) | C1—O1—Ho1 | 115.09 (18) |
| O7v—C8—C8v | 115.6 (3) | C1i—O2—Ho1 | 169.7 (2) |
| O2—Ho1—O3 | 88.38 (8) | C4—O3—Ho1 | 132.61 (19) |
| O2—Ho1—O7 | 141.51 (7) | C7—O4—Ho1 | 118.19 (18) |
| O3—Ho1—O7 | 88.96 (8) | C7iv—O5—Ho1 | 116.85 (18) |
| O2—Ho1—O4 | 75.56 (7) | C8—O6—Ho1 | 115.09 (18) |
| O3—Ho1—O4 | 81.26 (8) | C8v—O7—Ho1 | 119.68 (18) |
| O7—Ho1—O4 | 141.63 (7) | Ho1—O8—H7 | 108 (4) |
| O2—Ho1—O5 | 143.17 (7) | Ho1—O8—H8 | 106 (4) |
| O3—Ho1—O5 | 78.02 (7) | H7—O8—H8 | 126 (5) |
| O7—Ho1—O5 | 73.02 (7) | H9—O9—H10 | 111 (6) |
| H··· | ||||
| N1—H1···O7vi | 0.90 (1) | 1.83 (1) | 2.727 (3) | 171 (3) |
| O8—H7···O9v | 0.85 (1) | 1.95 (1) | 2.787 (4) | 171 (5) |
| O8—H8···O4i | 0.85 (1) | 1.96 (1) | 2.811 (3) | 177 (6) |
| O9—H9···O3vii | 0.85 (1) | 2.08 (1) | 2.929 (4) | 178 (6) |
| O9—H10···O1v | 0.85 (1) | 2.48 (6) | 3.003 (4) | 120 (5) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O7i | 0.90 (1) | 1.83 (1) | 2.727 (3) | 171 (3) |
| O8—H7⋯O9ii | 0.85 (1) | 1.95 (1) | 2.787 (4) | 171 (5) |
| O8—H8⋯O4iii | 0.85 (1) | 1.96 (1) | 2.811 (3) | 177 (6) |
| O9—H9⋯O3iv | 0.85 (1) | 2.08 (1) | 2.929 (4) | 178 (6) |
| O9—H10⋯O1ii | 0.85 (1) | 2.48 (6) | 3.003 (4) | 120 (5) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .