Literature DB >> 22967237

Molecular dynamic simulations of the binary complex of human tissue factor (TF(1-242) ) and factor VIIa (TF(1-242) /FVIIa) on a 4:1 POPC/POPS lipid bilayer.

C J Lee1, S Wu, L J Bartolotti, L G Pedersen.   

Abstract

Entities:  

Mesh：

Substances：

Year:  2012        PMID： 22967237      PMCID： PMC3537916          DOI： 10.1111/j.1538-7836.2012.04920.x

Source DB:  PubMed          Journal:  J Thromb Haemost        ISSN： 1538-7836            Impact factor:   5.824


× No keyword cloud information.
  13 in total

1.  Scalable molecular dynamics with NAMD.

Authors:  James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

2.  Tissue factor positions and maintains the factor VIIa active site far above the membrane surface even in the absence of the factor VIIa Gla domain. A fluorescence resonance energy transfer study.

Authors:  C D McCallum; B Su; P F Neuenschwander; J H Morrissey; A E Johnson
Journal:  J Biol Chem       Date:  1997-11-28       Impact factor: 5.157

3.  The crystal structure of the complex of blood coagulation factor VIIa with soluble tissue factor.

Authors:  D W Banner; A D'Arcy; C Chène; F K Winkler; A Guha; W H Konigsberg; Y Nemerson; D Kirchhofer
Journal:  Nature       Date:  1996-03-07       Impact factor: 49.962

4.  Dynamical view of membrane binding and complex formation of human factor VIIa and tissue factor.

Authors:  Y Z Ohkubo; J H Morrissey; E Tajkhorshid
Journal:  J Thromb Haemost       Date:  2010-02-24       Impact factor: 5.824

5.  Tissue factor and its extracellular soluble domain: the relationship between intermolecular association with factor VIIa and enzymatic activity of the complex.

Authors:  E Waxman; J B Ross; T M Laue; A Guha; S V Thiruvikraman; T C Lin; W H Konigsberg; Y Nemerson
Journal:  Biochemistry       Date:  1992-04-28       Impact factor: 3.162

6.  Substrate recognition by tissue factor-factor VIIa. Evidence for interaction of residues Lys165 and Lys166 of tissue factor with the 4-carboxyglutamate-rich domain of factor X.

Authors:  Q Huang; P F Neuenschwander; A R Rezaie; J H Morrissey
Journal:  J Biol Chem       Date:  1996-09-06       Impact factor: 5.157

7.  The location of the active site of blood coagulation factor VIIa above the membrane surface and its reorientation upon association with tissue factor. A fluorescence energy transfer study.

Authors:  C D McCallum; R C Hapak; P F Neuenschwander; J H Morrissey; A E Johnson
Journal:  J Biol Chem       Date:  1996-11-08       Impact factor: 5.157

8.  The tissue factor/factor VIIa/factor Xa complex: a model built by docking and site-directed mutagenesis.

Authors:  Brian V Norledge; Ramona J Petrovan; Wolfram Ruf; Arthur J Olson
Journal:  Proteins       Date:  2003-11-15

9.  Cofactor residues lysine 165 and 166 are critical for protein substrate recognition by the tissue factor-factor VIIa protease complex.

Authors:  W Ruf; D J Miles; A Rehemtulla; T S Edgington
Journal:  J Biol Chem       Date:  1992-03-25       Impact factor: 5.157

10.  Roles of the membrane-interactive regions of factor VIIa and tissue factor. The factor VIIa Gla domain is dispensable for binding to tissue factor but important for activation of factor X.

Authors:  P F Neuenschwander; J H Morrissey
Journal:  J Biol Chem       Date:  1994-03-18       Impact factor: 5.157
View more
  4 in total

1.  Evolutionary conservation of the allosteric activation of factor VIIa by tissue factor in lamprey.

Authors:  D L Beeler; W C Aird; M A Grant
Journal:  J Thromb Haemost       Date:  2018-03-12       Impact factor: 5.824

2.  Conformational Plasticity-Rigidity Axis of the Coagulation Factor VII Zymogen Elucidated by Atomistic Simulations of the N-Terminally Truncated Factor VIIa Protease Domain.

Authors:  Jesper J Madsen; Ole H Olsen
Journal:  Biomolecules       Date:  2021-04-08

3.  A systematic approach for evaluating the role of surface-exposed loops in trypsin-like serine proteases applied to the 170 loop in coagulation factor VIIa.

Authors:  Anders B Sorensen; Per Jr Greisen; Jesper J Madsen; Jacob Lund; Gorm Andersen; Pernille G Wulff-Larsen; Anette A Pedersen; Prafull S Gandhi; Michael T Overgaard; Henrik Østergaard; Ole H Olsen
Journal:  Sci Rep       Date:  2022-03-08       Impact factor: 4.379

Review 4.  Uncovering Membrane-Bound Models of Coagulation Factors by Combined Experimental and Computational Approaches.

Authors:  Y Zenmei Ohkubo; Jesper J Madsen
Journal:  Thromb Haemost       Date:  2021-07-02       Impact factor: 5.249
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.